Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY44045 | Canola | nucleus | 96.0 | 92.63 |
| CDX75635 | Canola | nucleus | 89.09 | 81.94 |
| CDX69287 | Canola | nucleus | 84.73 | 76.14 |
| CDX72621 | Canola | nucleus | 71.27 | 73.96 |
| CDY29542 | Canola | nucleus | 70.91 | 73.58 |
| AT4G37260.1 | Thale cress | nucleus | 85.09 | 73.12 |
| CDY38933 | Canola | nucleus | 69.45 | 65.41 |
| CDX89554 | Canola | nucleus | 68.73 | 64.51 |
| CDX83109 | Canola | nucleus | 33.45 | 56.79 |
| KRH57983 | Soybean | nucleus | 57.09 | 53.22 |
| KRH28419 | Soybean | nucleus | 57.45 | 53.2 |
| CDY12830 | Canola | nucleus | 48.73 | 52.96 |
| KRH77058 | Soybean | nucleus | 58.18 | 52.46 |
| CDY01420 | Canola | nucleus | 49.82 | 52.09 |
| VIT_18s0001g09850.t01 | Wine grape | nucleus | 58.91 | 51.76 |
| CDY30608 | Canola | nucleus | 49.82 | 51.7 |
| CDY57355 | Canola | nucleus | 52.0 | 51.44 |
| VIT_07s0129g01050.t01 | Wine grape | nucleus | 57.45 | 50.64 |
| CDY23023 | Canola | nucleus | 51.64 | 48.97 |
| CDY02098 | Canola | nucleus | 51.27 | 48.12 |
| Zm00001d005300_P001 | Maize | nucleus | 48.73 | 47.02 |
| CDY43567 | Canola | nucleus | 37.09 | 47.0 |
| Os09t0106700-01 | Rice | nucleus | 52.36 | 45.14 |
| TraesCS5B01G157300.1 | Wheat | nucleus | 53.82 | 44.18 |
| Solyc02g092930.1.1 | Tomato | nucleus | 57.82 | 44.04 |
| TraesCS5A01G159600.1 | Wheat | nucleus | 53.45 | 43.75 |
| PGSC0003DMT400064306 | Potato | mitochondrion, nucleus | 58.91 | 43.67 |
| TraesCS5D01G164600.1 | Wheat | nucleus | 53.45 | 42.86 |
| Zm00001d019712_P001 | Maize | nucleus | 53.45 | 42.61 |
| EER98550 | Sorghum | nucleus | 53.82 | 40.44 |
| CDX68566 | Canola | nucleus | 43.27 | 37.9 |
| HORVU5Hr1G049880.1 | Barley | plastid | 53.09 | 34.43 |
| CDY35992 | Canola | nucleus | 19.64 | 34.39 |
| CDY21728 | Canola | nucleus | 19.27 | 33.76 |
| CDX83108 | Canola | cytosol | 4.36 | 30.77 |
| CDX83880 | Canola | nucleus | 19.64 | 29.67 |
| CDY07907 | Canola | nucleus | 32.0 | 26.51 |
| CDX96475 | Canola | nucleus | 21.82 | 26.32 |
| CDX73963 | Canola | nucleus | 32.0 | 26.27 |
| CDX72988 | Canola | nucleus | 21.45 | 26.11 |
| CDX82074 | Canola | nucleus | 21.45 | 25.32 |
| CDY71713 | Canola | nucleus | 21.09 | 25.22 |
| CDY58312 | Canola | nucleus | 21.45 | 25.21 |
| CDX72405 | Canola | nucleus | 21.82 | 24.9 |
| CDY44415 | Canola | nucleus | 23.27 | 24.52 |
| CDY46114 | Canola | nucleus | 21.45 | 24.48 |
| CDY20494 | Canola | nucleus | 32.36 | 24.18 |
| CDX72208 | Canola | nucleus | 32.36 | 24.18 |
| CDY27271 | Canola | nucleus | 32.73 | 24.13 |
| CDX68977 | Canola | nucleus | 21.82 | 24.0 |
| CDX75353 | Canola | nucleus | 21.82 | 23.9 |
| CDY28302 | Canola | nucleus | 21.82 | 23.9 |
| CDY30264 | Canola | nucleus | 22.18 | 23.46 |
| CDX96742 | Canola | nucleus | 20.36 | 23.14 |
| CDY21727 | Canola | nucleus | 21.09 | 23.11 |
| CDX81853 | Canola | nucleus | 20.73 | 23.08 |
| CDY67808 | Canola | nucleus | 13.09 | 22.64 |
| CDY69058 | Canola | nucleus | 21.09 | 21.97 |
| CDY20004 | Canola | nucleus | 22.91 | 21.95 |
| CDX74825 | Canola | nucleus | 32.0 | 21.95 |
| CDY66025 | Canola | nucleus | 22.91 | 21.88 |
| CDY16884 | Canola | nucleus | 24.73 | 21.79 |
| CDX70776 | Canola | nucleus | 24.36 | 21.41 |
| CDX78761 | Canola | nucleus | 24.36 | 21.41 |
| CDY38460 | Canola | nucleus | 25.09 | 21.3 |
| CDX85443 | Canola | nucleus | 23.64 | 21.17 |
| CDY07345 | Canola | nucleus | 22.91 | 21.14 |
| CDY67868 | Canola | nucleus | 22.55 | 20.81 |
| CDY02687 | Canola | nucleus | 23.27 | 20.65 |
| CDY66170 | Canola | nucleus | 22.91 | 20.06 |
| CDX95921 | Canola | nucleus | 22.91 | 19.69 |
| CDY40941 | Canola | nucleus | 22.55 | 19.38 |
| CDY70773 | Canola | nucleus | 20.0 | 19.23 |
| CDY70901 | Canola | nucleus | 19.64 | 18.88 |
| CDY50737 | Canola | nucleus | 22.55 | 18.02 |
| CDY46444 | Canola | nucleus | 22.18 | 17.28 |
| CDY44993 | Canola | nucleus | 22.18 | 17.28 |
| CDX74436 | Canola | nucleus | 21.82 | 16.62 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.2.1 | GO:A0A078GBI7 | UniProt:A0A078GBI7 | EnsemblPlants:CDY22442 | ProteinID:CDY22442 |
| ProteinID:CDY22442.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | EnsemblPlantsGene:GSBRNA2T00018975001 |
| InterPro:Homeobox-like_sf | InterPro:IPR017930 | InterPro:Myb_dom | PFAM:PF00249 | PFscan:PS51294 | PANTHER:PTHR10641 |
| PANTHER:PTHR10641:SF691 | InterPro:SANT/Myb | SMART:SM00717 | SUPFAM:SSF46689 | UniParc:UPI0004EF0C25 | SEG:seg |
Description
BnaC03g61550DBnaC03g61550D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GBI7]
Coordinates
chrLK032131:-:363533..364622
Molecular Weight (calculated)
30258.5 Da
IEP (calculated)
7.974
GRAVY (calculated)
-0.728
Length
275 amino acids
Sequence
(BLAST)
(BLAST)
001: MSSSVRKNME RIKGPWSPEE DELLQSLVQK HGPRNWSLIS KSIPGRSGKS CRLRWCNQLS PEVEHRGFSP EEDETIVRAH ARFGNKWATI SRLLSGRTDN
101: AIKNHWNSTL KRKCSAVTSD GYDGNIGEEQ PLKRTASGGG VSTELYMSPR SPSGSDVSEQ SGGGPHVFRS GAVNEMTASS SGADPPTYLS LSLPWNNRYE
201: TENVRLFPVR KEEVDEQKEM SGFGGEFMTV VQEMIRTEVR SYMADLQRGN IGGGGGGSCM PQSVTMNQIG IGKIE
101: AIKNHWNSTL KRKCSAVTSD GYDGNIGEEQ PLKRTASGGG VSTELYMSPR SPSGSDVSEQ SGGGPHVFRS GAVNEMTASS SGADPPTYLS LSLPWNNRYE
201: TENVRLFPVR KEEVDEQKEM SGFGGEFMTV VQEMIRTEVR SYMADLQRGN IGGGGGGSCM PQSVTMNQIG IGKIE
001: MSNPTRKNME RIKGPWSPEE DDLLQRLVQK HGPRNWSLIS KSIPGRSGKS CRLRWCNQLS PEVEHRAFSQ EEDETIIRAH ARFGNKWATI SRLLNGRTDN
101: AIKNHWNSTL KRKCSVEGQS CDFGGNGGYD GNLGEEQPLK RTASGGGGVS TGLYMSPGSP SGSDVSEQSS GGAHVFKPTV RSEVTASSSG EDPPTYLSLS
201: LPWTDETVRV NEPVQLNQNT VMDGGYTAEL FPVRKEEQVE VEEEEAKGIS GGFGGEFMTV VQEMIRTEVR SYMADLQRGN VGGSSSGGGG GGSCMPQSVN
301: SRRVGFREFI VNQIGIGKME
101: AIKNHWNSTL KRKCSVEGQS CDFGGNGGYD GNLGEEQPLK RTASGGGGVS TGLYMSPGSP SGSDVSEQSS GGAHVFKPTV RSEVTASSSG EDPPTYLSLS
201: LPWTDETVRV NEPVQLNQNT VMDGGYTAEL FPVRKEEQVE VEEEEAKGIS GGFGGEFMTV VQEMIRTEVR SYMADLQRGN VGGSSSGGGG GGSCMPQSVN
301: SRRVGFREFI VNQIGIGKME
Arabidopsis Description
MYB73MYB73 [Source:UniProtKB/TrEMBL;Acc:A0A178V4E7]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.