Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- plastid 2
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY38460 | Canola | nucleus | 98.08 | 94.44 |
| Bra002107.1-P | Field mustard | nucleus | 97.12 | 93.52 |
| CDX85443 | Canola | nucleus | 79.17 | 80.46 |
| CDY02687 | Canola | nucleus | 79.17 | 79.68 |
| CDX78761 | Canola | nucleus | 75.32 | 75.08 |
| AT5G17800.1 | Thale cress | nucleus | 76.6 | 73.99 |
| CDX70776 | Canola | nucleus | 73.72 | 73.48 |
| CDY69058 | Canola | nucleus | 58.97 | 69.7 |
| CDY35992 | Canola | nucleus | 27.24 | 54.14 |
| CDY21728 | Canola | nucleus | 26.28 | 52.23 |
| CDX83880 | Canola | nucleus | 27.56 | 47.25 |
| CDX96475 | Canola | nucleus | 31.73 | 43.42 |
| CDX72988 | Canola | nucleus | 31.09 | 42.92 |
| CDX96742 | Canola | nucleus | 32.69 | 42.15 |
| CDY58312 | Canola | nucleus | 31.41 | 41.88 |
| CDX82074 | Canola | nucleus | 31.09 | 41.63 |
| CDY21727 | Canola | nucleus | 32.69 | 40.64 |
| CDX81853 | Canola | nucleus | 32.05 | 40.49 |
| CDY71713 | Canola | nucleus | 28.53 | 38.7 |
| CDX75353 | Canola | nucleus | 30.45 | 37.85 |
| CDY67808 | Canola | nucleus | 19.23 | 37.74 |
| PGSC0003DMT400072258 | Potato | nucleus | 38.46 | 37.38 |
| CDY28302 | Canola | nucleus | 29.81 | 37.05 |
| Solyc10g081320.1.1 | Tomato | nucleus | 37.82 | 36.99 |
| CDX68977 | Canola | nucleus | 29.49 | 36.8 |
| CDY44415 | Canola | nucleus | 29.81 | 35.63 |
| CDY30264 | Canola | nucleus | 29.49 | 35.38 |
| CDY67868 | Canola | nucleus | 32.69 | 34.23 |
| CDX72405 | Canola | nucleus | 26.28 | 34.02 |
| CDY07345 | Canola | nucleus | 32.37 | 33.89 |
| CDY46114 | Canola | nucleus | 25.96 | 33.61 |
| CDY20004 | Canola | nucleus | 30.77 | 33.45 |
| KRG94926 | Soybean | nucleus | 40.06 | 33.07 |
| CDY66025 | Canola | nucleus | 30.45 | 32.99 |
| CDY40941 | Canola | nucleus | 33.33 | 32.5 |
| CDX95921 | Canola | nucleus | 33.33 | 32.5 |
| CDX83109 | Canola | nucleus | 16.35 | 31.48 |
| KRH64970 | Soybean | nucleus | 40.71 | 31.36 |
| CDY50737 | Canola | nucleus | 34.29 | 31.1 |
| CDY46444 | Canola | nucleus | 34.94 | 30.88 |
| CDY44993 | Canola | nucleus | 34.94 | 30.88 |
| CDY66170 | Canola | nucleus | 30.45 | 30.25 |
| VIT_08s0056g01190.t01 | Wine grape | golgi | 38.78 | 27.13 |
| CDX74436 | Canola | nucleus | 29.81 | 25.76 |
| CDY12830 | Canola | nucleus | 20.51 | 25.3 |
| CDX72621 | Canola | nucleus | 21.47 | 25.28 |
| CDY29542 | Canola | nucleus | 21.15 | 24.91 |
| CDY22442 | Canola | nucleus | 21.79 | 24.73 |
| CDY01420 | Canola | nucleus | 20.83 | 24.71 |
| CDY44045 | Canola | nucleus | 22.44 | 24.56 |
| CDY30608 | Canola | nucleus | 20.51 | 24.15 |
| CDX75635 | Canola | nucleus | 23.08 | 24.08 |
| CDX89554 | Canola | nucleus | 22.44 | 23.89 |
| CDY38933 | Canola | nucleus | 22.12 | 23.63 |
| CDX69287 | Canola | nucleus | 23.08 | 23.53 |
| CDY57355 | Canola | nucleus | 20.83 | 23.38 |
| CDY23023 | Canola | nucleus | 20.83 | 22.41 |
| CDY02098 | Canola | nucleus | 20.83 | 22.18 |
| CDX73963 | Canola | nucleus | 20.19 | 18.81 |
| CDX68566 | Canola | nucleus | 18.59 | 18.47 |
| CDY43567 | Canola | nucleus | 12.82 | 18.43 |
| CDY07907 | Canola | nucleus | 19.55 | 18.37 |
| CDY20494 | Canola | nucleus | 21.15 | 17.93 |
| CDX74825 | Canola | nucleus | 21.79 | 16.96 |
| CDY27271 | Canola | nucleus | 19.87 | 16.62 |
| CDX72208 | Canola | nucleus | 19.55 | 16.58 |
| CDY70901 | Canola | nucleus | 10.26 | 11.19 |
| CDY70773 | Canola | nucleus | 10.26 | 11.19 |
| CDX83108 | Canola | cytosol | 0.64 | 5.13 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.2.1 | GO:A0A078FV17 | UniProt:A0A078FV17 | EnsemblPlants:CDY16884 | ProteinID:CDY16884 |
| ProteinID:CDY16884.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | EnsemblPlantsGene:GSBRNA2T00094779001 |
| InterPro:Homeobox-like_sf | InterPro:IPR017930 | InterPro:Myb_dom | PFAM:PF00249 | PFscan:PS51294 | PANTHER:PTHR10641 |
| PANTHER:PTHR10641:SF941 | InterPro:SANT/Myb | SMART:SM00717 | SUPFAM:SSF46689 | UniParc:UPI0004EDD1AD | SEG:seg |
Description
BnaC09g40110DBnaC09g40110D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FV17]
Coordinates
chrLK032068:-:82638..84661
Molecular Weight (calculated)
35436.2 Da
IEP (calculated)
9.750
GRAVY (calculated)
-0.936
Length
312 amino acids
Sequence
(BLAST)
(BLAST)
001: MNPNLLKNNL TGNYTINDSG RFEVRNNFRS PPHSHPNFSL ARKHLHNKSV SVLESGDEHE KERGGNGLKR RGKNGINSKL CSRGHWRPTE DAKLKELVAQ
101: FGPQNWNVIA HHLLGRSGKS CRLRWFNQLD PRINKRAFTE EEESRLLAVH QAYGNKWALI SRLFPGRTDN AVKNHWHVIM SRRTRESQRQ RQMQTPQAPS
201: GNAEIVSSSS SYNHGELFDD DGDDEDASAV STCTTELSLT PPSSTHQARF LNYDSTLVPG KDGQCVQRAE VNGRYSKKMD HQNHHTITVS EERKVEMQSG
301: FYFFDFLGVG AS
101: FGPQNWNVIA HHLLGRSGKS CRLRWFNQLD PRINKRAFTE EEESRLLAVH QAYGNKWALI SRLFPGRTDN AVKNHWHVIM SRRTRESQRQ RQMQTPQAPS
201: GNAEIVSSSS SYNHGELFDD DGDDEDASAV STCTTELSLT PPSSTHQARF LNYDSTLVPG KDGQCVQRAE VNGRYSKKMD HQNHHTITVS EERKVEMQSG
301: FYFFDFLGVG AS
001: MNPNLLEKDL RGKETTNGSI RYKEANNFRS LPNSHTAACK TSLNNPSISR NHPHNKSASV LESEDEHGNE RGENEKSLRM RGKSGINTKV CSRGHWRPTE
101: DAKLKELVAQ FGPQNWNLIS NHLLGRSGKS CRLRWFNQLD PRINKRAFTE EEEFRLLAAH RAYGNKWALI SRLFPGRTDN AVKNHWHVIM ARRTRESQRQ
201: RQQPPPTLSR DAEMTVSSSC RYNQGKFINE EDDDDDVSAV STCTTELSLT PPSSAYQPRF FNYDSTLASG KDGQCVQRAE VNGIYGKKMD HQNHHTISVS
301: ERKVEMKMRS GYYYFDFLGV GAS
101: DAKLKELVAQ FGPQNWNLIS NHLLGRSGKS CRLRWFNQLD PRINKRAFTE EEEFRLLAAH RAYGNKWALI SRLFPGRTDN AVKNHWHVIM ARRTRESQRQ
201: RQQPPPTLSR DAEMTVSSSC RYNQGKFINE EDDDDDVSAV STCTTELSLT PPSSAYQPRF FNYDSTLASG KDGQCVQRAE VNGIYGKKMD HQNHHTISVS
301: ERKVEMKMRS GYYYFDFLGV GAS
Arabidopsis Description
MYB56Transcription factor MYB56 [Source:UniProtKB/Swiss-Prot;Acc:Q6R053]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.