Factsheet for Solyc10g081320.1.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400072258	Potato	nucleus	95.3	94.7
KRG94926	Soybean	nucleus	50.16	42.33
KRH64970	Soybean	nucleus	52.04	40.99
CDY16884	Canola	nucleus	36.99	37.82
CDX85443	Canola	nucleus	35.42	36.81
CDY69058	Canola	nucleus	30.41	36.74
Bra006422.1-P	Field mustard	nucleus	36.05	36.74
CDX78761	Canola	nucleus	36.05	36.74
CDY02687	Canola	nucleus	35.42	36.45
CDX70776	Canola	nucleus	35.74	36.42
CDY38460	Canola	nucleus	36.99	36.42
Bra002107.1-P	Field mustard	nucleus	36.68	36.11
AT5G17800.1	Thale cress	nucleus	36.36	35.91
Bra023637.1-P	Field mustard	nucleus	34.8	34.91
Solyc04g064540.2.1	Tomato	nucleus	33.54	34.63
Solyc05g007870.1.1	Tomato	nucleus	40.75	31.18
VIT_08s0056g01190.t01	Wine grape	golgi	42.32	30.27
Solyc04g079360.1.1	Tomato	nucleus	21.0	26.59
Solyc04g078420.1.1	Tomato	nucleus	20.69	20.12
Solyc02g092930.1.1	Tomato	nucleus	21.94	19.39
Solyc09g011780.2.1	Tomato	nucleus	22.26	18.68
Solyc05g052850.2.1	Tomato	nucleus	21.0	17.91

Protein Annotations

Gene3D:1.10.10.60	MapMan:15.5.2.1	GO:GO:0000981	GO:GO:0001135	GO:GO:0003674	GO:GO:0003676
GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0006139	GO:GO:0006357	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	GO:GO:0030154	GO:GO:0043565	GO:GO:0044212	InterPro:Homeobox-like_sf	InterPro:IPR017930
UniProt:K4D319	InterPro:Myb_dom	PFAM:PF00249	PFscan:PS51294	PANTHER:PTHR10641	PANTHER:PTHR10641:SF941
InterPro:SANT/Myb	SMART:SM00717	SUPFAM:SSF46689	EnsemblPlantsGene:Solyc10g081320.1	EnsemblPlants:Solyc10g081320.1.1	UniParc:UPI00027698D6
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr10:+:62422767..62424965

Molecular Weight (calculated)

36556.9 Da

IEP (calculated)

6.322

GRAVY (calculated)

-0.795

Length

319 amino acids

Sequence
(BLAST)

001: MNSSVGSCYV QKMNFLVPCV EENPWRLHQM ENKFKDEEEG LVDLIGIKDT NHNINGGTKL CARGHWRPHE DAKLKELVGQ YGPQNWNLIA EKLEGRSGKS
101: CRLRWFNQLD PRINRKAFSE EEEERLLSAH KMYGNKWSMI ARLFPGRTDN AVKNHWHVIM ARKHREQNSV YRRRKTSNLQ QIIAPNNNNN NDDDNDDMII
201: QSDSTISSNI VDDLQSDSTC TNLSLTPSSS KAIIHPFLMT RFNHHHVEHQ GIIDPNKGLS RDEEEVKMGL YGNMSDTNSE ISASESVANN MTNIVKIYEQ
301: DEDDIKTVNF IDFLGVGAT

Best Arabidopsis Sequence Match ( AT1G69560.2 )
(BLAST)

001: MMFKVIFNIC SSPPMRMEMV HADVASLSIT PCFPSSLSSS SHHHYNQQQH CIMSEDQHHS MDQTTSSDYF SLNIDNAQHL RSYYTSHREE DMNPNLSDYS
101: NCNKKDTTVY RSCGHSSKAS VSRGHWRPAE DTKLKELVAV YGPQNWNLIA EKLQGRSGKS CRLRWFNQLD PRINRRAFTE EEEERLMQAH RLYGNKWAMI
201: ARLFPGRTDN SVKNHWHVIM ARKFREQSSS YRRRKTMVSL KPLINPNPHI FNDFDPTRLA LTHLASSDHK QLMLPVPCFP GYDHENESPL MVDMFETQMM
301: VGDYIAWTQE ATTFDFLNQT GKSEIFERIN EEKKPPFFDF LGLGTV

Arabidopsis Description

MYB105myb domain protein 105 [Source:TAIR;Acc:AT1G69560]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.