Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX75353 | Canola | nucleus | 95.6 | 95.22 |
| Bra011441.1-P | Field mustard | nucleus | 94.4 | 94.78 |
| CDY71713 | Canola | nucleus | 77.2 | 83.91 |
| CDY28302 | Canola | nucleus | 84.0 | 83.67 |
| AT4G33450.1 | Thale cress | nucleus | 82.0 | 82.0 |
| CDY21728 | Canola | nucleus | 34.4 | 54.78 |
| CDY35992 | Canola | nucleus | 34.0 | 54.14 |
| GSMUA_Achr3P16490_001 | Banana | nucleus | 32.4 | 48.21 |
| CDX83880 | Canola | nucleus | 34.8 | 47.8 |
| Zm00001d004681_P001 | Maize | nucleus | 35.2 | 46.07 |
| CDX96475 | Canola | nucleus | 40.8 | 44.74 |
| CDX72988 | Canola | nucleus | 40.4 | 44.69 |
| CDX82074 | Canola | nucleus | 39.2 | 42.06 |
| CDY58312 | Canola | nucleus | 39.2 | 41.88 |
| Zm00001d041818_P001 | Maize | nucleus | 36.8 | 40.89 |
| CDX96742 | Canola | nucleus | 39.2 | 40.5 |
| CDX81853 | Canola | nucleus | 39.6 | 40.08 |
| GSMUA_Achr9P08480_001 | Banana | nucleus | 40.8 | 39.84 |
| CDX72405 | Canola | nucleus | 37.6 | 39.0 |
| CDY46114 | Canola | nucleus | 37.6 | 39.0 |
| CDY21727 | Canola | nucleus | 38.8 | 38.65 |
| GSMUA_Achr10P... | Banana | nucleus | 39.6 | 38.08 |
| GSMUA_Achr6P17630_001 | Banana | nucleus | 39.2 | 37.26 |
| EES15780 | Sorghum | nucleus | 36.4 | 36.11 |
| EES09660 | Sorghum | nucleus | 39.6 | 35.87 |
| Zm00001d049079_P001 | Maize | nucleus | 39.6 | 35.74 |
| Os11t0207600-00 | Rice | nucleus, plastid | 38.0 | 35.58 |
| GSMUA_Achr3P18970_001 | Banana | nucleus | 37.2 | 35.5 |
| VIT_04s0044g01380.t01 | Wine grape | nucleus | 42.8 | 35.43 |
| TraesCS4B01G105200.1 | Wheat | nucleus | 38.4 | 34.91 |
| TraesCS4A01G211100.1 | Wheat | nucleus | 38.4 | 34.78 |
| TraesCS4D01G102100.1 | Wheat | nucleus | 38.4 | 34.66 |
| HORVU4Hr1G017040.2 | Barley | nucleus | 38.4 | 34.53 |
| PGSC0003DMT400063862 | Potato | nucleus | 40.8 | 33.77 |
| Solyc04g064540.2.1 | Tomato | nucleus | 40.0 | 32.36 |
| KRH53362 | Soybean | nucleus | 42.8 | 32.33 |
| CDX83109 | Canola | nucleus | 20.8 | 32.1 |
| CDY30264 | Canola | nucleus | 32.8 | 31.54 |
| CDY44415 | Canola | nucleus | 32.8 | 31.42 |
| KRH64569 | Soybean | nucleus | 42.0 | 31.07 |
| CDY67808 | Canola | nucleus | 19.6 | 30.82 |
| CDX78761 | Canola | nucleus | 37.2 | 29.71 |
| CDY16884 | Canola | nucleus | 36.8 | 29.49 |
| CDX85443 | Canola | nucleus | 36.0 | 29.32 |
| CDX70776 | Canola | nucleus | 36.4 | 29.07 |
| CDY38460 | Canola | nucleus | 37.6 | 29.01 |
| CDY07345 | Canola | nucleus | 34.4 | 28.86 |
| CDY67868 | Canola | nucleus | 34.4 | 28.86 |
| CDY02687 | Canola | nucleus | 35.6 | 28.71 |
| CDY66025 | Canola | nucleus | 32.8 | 28.47 |
| CDY69058 | Canola | nucleus | 30.0 | 28.41 |
| CDY20004 | Canola | nucleus | 32.4 | 28.22 |
| CDX95921 | Canola | nucleus | 35.6 | 27.81 |
| CDY40941 | Canola | nucleus | 35.6 | 27.81 |
| CDY66170 | Canola | nucleus | 32.8 | 26.11 |
| CDY50737 | Canola | nucleus | 35.2 | 25.58 |
| CDY44993 | Canola | nucleus | 35.6 | 25.21 |
| CDY46444 | Canola | nucleus | 35.6 | 25.21 |
| CDY12830 | Canola | nucleus | 24.0 | 23.72 |
| CDX72621 | Canola | nucleus | 24.8 | 23.4 |
| CDY01420 | Canola | nucleus | 24.0 | 22.81 |
| CDX74436 | Canola | nucleus | 32.8 | 22.71 |
| CDY30608 | Canola | nucleus | 24.0 | 22.64 |
| CDY29542 | Canola | nucleus | 24.0 | 22.64 |
| CDY23023 | Canola | nucleus | 25.6 | 22.07 |
| CDY38933 | Canola | nucleus | 25.6 | 21.92 |
| CDY02098 | Canola | nucleus | 25.6 | 21.84 |
| CDX89554 | Canola | nucleus | 25.6 | 21.84 |
| CDY22442 | Canola | nucleus | 24.0 | 21.82 |
| CDY57355 | Canola | nucleus | 24.0 | 21.58 |
| CDX75635 | Canola | nucleus | 25.2 | 21.07 |
| CDY44045 | Canola | nucleus | 24.0 | 21.05 |
| CDX69287 | Canola | nucleus | 25.2 | 20.59 |
| CDX73963 | Canola | nucleus | 24.8 | 18.51 |
| CDY07907 | Canola | nucleus | 24.4 | 18.37 |
| CDX68566 | Canola | nucleus | 22.8 | 18.15 |
| CDY43567 | Canola | nucleus | 15.6 | 17.97 |
| CDY20494 | Canola | nucleus | 24.4 | 16.58 |
| CDY27271 | Canola | nucleus | 24.4 | 16.35 |
| CDX72208 | Canola | nucleus | 23.6 | 16.03 |
| CDX74825 | Canola | nucleus | 24.8 | 15.46 |
| CDY70901 | Canola | nucleus | 14.0 | 12.24 |
| CDY70773 | Canola | nucleus | 14.0 | 12.24 |
| CDX83108 | Canola | cytosol | 0.8 | 5.13 |
Protein Annotations
| EnsemblPlants:CDX68977 | EnsemblPlantsGene:GSBRNA2T00130726001 | Gene3D:1.10.10.60 | GO:A0A078BXD0 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0005488 | InterPro:Homeobox-like_sf | InterPro:IPR017930 | InterPro:Myb_dom | InterPro:SANT/Myb |
| PANTHER:PTHR10641 | PANTHER:PTHR10641:SF525 | PFAM:PF13921 | PFscan:PS51294 | ProteinID:CDX68977 | ProteinID:CDX68977.1 |
| SMART:SM00717 | SUPFAM:SSF46689 | UniParc:UPI0004EC6622 | MapMan:15.5.2.1 | : | : |
Description
BnaC01g04760D
Coordinates
chrLK031789:-:2272136..2273041
Molecular Weight (calculated)
28900.7 Da
IEP (calculated)
10.242
GRAVY (calculated)
-0.989
Length
250 amino acids
Sequence
(BLAST)
(BLAST)
001: MDMSRGSNSF DYKKISCQRG HWRPIEDDHL RQLVEQYGPK NWNFIAQHLC GRSGKSCRLR WYNQLDPNIT KKPFTEEEEE RLLKAHRIQG NRWASIARLF
101: PGRTDNAVKN HFHVIMARRK RESLSSTSTS TFNQSWHNML SPSPSLTRLN RSQFGLWRYQ KDKSHGTSPY TFVSTPRDDQ FGSSSISNVR KEVYPERRKL
201: KELVDEHNNA FHTATPDQNK NSVEDGPSTG DDGGKRNVAF IDFLGVGLVS
101: PGRTDNAVKN HFHVIMARRK RESLSSTSTS TFNQSWHNML SPSPSLTRLN RSQFGLWRYQ KDKSHGTSPY TFVSTPRDDQ FGSSSISNVR KEVYPERRKL
201: KELVDEHNNA FHTATPDQNK NSVEDGPSTG DDGGKRNVAF IDFLGVGLVS
001: MEMSRGSNSF DNKKPSCQRG HWRPVEDDNL RQLVEQYGPK NWNFIAQHLY GRSGKSCRLR WYNQLDPNIT KKPFTEEEEE RLLKAHRIQG NRWASIARLF
101: PGRTDNAVKN HFHVIMARRK RENFSSTATS TFNQTWHTVL SPSSSLTRLN RSHFGLWRYR KDKSCGLWPY SFVSPPTNGQ FGSSSVSNVH HEIYLERRKS
201: KELVDPQNYT FHAATPDHKM TSNEDGPSMG DDGEKNDVTF IDFLGVGLAS
101: PGRTDNAVKN HFHVIMARRK RENFSSTATS TFNQTWHTVL SPSSSLTRLN RSHFGLWRYR KDKSCGLWPY SFVSPPTNGQ FGSSSVSNVH HEIYLERRKS
201: KELVDPQNYT FHAATPDHKM TSNEDGPSMG DDGEKNDVTF IDFLGVGLAS
Arabidopsis Description
ATMYB69MYB transcription factor [Source:UniProtKB/TrEMBL;Acc:Q9SZC2]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.