Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr3P16490_001 | Banana | nucleus | 36.54 | 56.55 |
| Zm00001d004681_P001 | Maize | nucleus | 39.23 | 53.4 |
| GSMUA_Achr6P17630_001 | Banana | nucleus | 50.0 | 49.43 |
| GSMUA_Achr9P29090_001 | Banana | nucleus | 38.85 | 48.1 |
| GSMUA_Achr3P18970_001 | Banana | nucleus | 48.08 | 47.71 |
| GSMUA_Achr9P08480_001 | Banana | nucleus | 46.54 | 47.27 |
| GSMUA_Achr3P07700_001 | Banana | nucleus | 36.54 | 46.34 |
| GSMUA_Achr9P15750_001 | Banana | nucleus | 36.54 | 45.02 |
| Zm00001d041818_P001 | Maize | nucleus | 38.85 | 44.89 |
| GSMUA_Achr11P... | Banana | nucleus | 31.54 | 44.81 |
| Os11t0207600-00 | Rice | nucleus, plastid | 43.08 | 41.95 |
| TraesCS4B01G105200.1 | Wheat | nucleus | 43.08 | 40.73 |
| TraesCS4A01G211100.1 | Wheat | nucleus | 43.08 | 40.58 |
| CDY71713 | Canola | nucleus | 35.77 | 40.43 |
| HORVU4Hr1G017040.2 | Barley | nucleus | 43.08 | 40.29 |
| TraesCS4D01G102100.1 | Wheat | nucleus | 42.69 | 40.07 |
| AT4G33450.1 | Thale cress | nucleus | 38.46 | 40.0 |
| CDX68977 | Canola | nucleus | 38.08 | 39.6 |
| CDX75353 | Canola | nucleus | 38.08 | 39.44 |
| Bra011441.1-P | Field mustard | nucleus | 37.69 | 39.36 |
| Zm00001d049079_P001 | Maize | nucleus | 41.92 | 39.35 |
| EES15780 | Sorghum | nucleus | 38.08 | 39.29 |
| EES09660 | Sorghum | nucleus | 41.54 | 39.13 |
| Bra034565.1-P | Field mustard | nucleus | 37.69 | 39.04 |
| CDY28302 | Canola | nucleus | 37.31 | 38.65 |
| GSMUA_Achr5P27750_001 | Banana | nucleus | 36.92 | 38.1 |
| KRH53362 | Soybean | nucleus | 47.31 | 37.16 |
| VIT_04s0044g01380.t01 | Wine grape | nucleus | 42.31 | 36.42 |
| KRH64569 | Soybean | nucleus | 46.54 | 35.8 |
| GSMUA_Achr6P15900_001 | Banana | nucleus | 37.69 | 35.64 |
| PGSC0003DMT400063862 | Potato | nucleus | 41.15 | 35.43 |
| Solyc04g064540.2.1 | Tomato | nucleus | 41.15 | 34.63 |
| GSMUA_Achr11P... | Banana | nucleus | 36.15 | 34.18 |
| GSMUA_Achr5P23290_001 | Banana | nucleus | 39.62 | 34.11 |
| GSMUA_Achr9P04990_001 | Banana | nucleus | 39.23 | 33.77 |
| GSMUA_Achr10P... | Banana | nucleus | 39.23 | 33.55 |
| GSMUA_Achr10P... | Banana | nucleus | 40.38 | 32.71 |
| GSMUA_Achr3P09490_001 | Banana | nucleus | 39.62 | 32.29 |
| GSMUA_Achr9P17000_001 | Banana | nucleus | 36.92 | 31.58 |
| GSMUA_Achr6P32250_001 | Banana | nucleus | 39.23 | 29.48 |
| GSMUA_Achr6P02580_001 | Banana | nucleus | 40.0 | 29.38 |
| GSMUA_Achr6P33470_001 | Banana | nucleus | 24.23 | 28.0 |
| GSMUA_Achr4P20150_001 | Banana | nucleus | 26.54 | 25.65 |
| GSMUA_Achr4P12950_001 | Banana | nucleus | 26.15 | 25.56 |
| GSMUA_Achr1P26140_001 | Banana | nucleus | 27.31 | 25.18 |
| GSMUA_Achr11P... | Banana | endoplasmic reticulum, golgi | 36.15 | 23.86 |
| GSMUA_Achr3P28230_001 | Banana | nucleus | 25.77 | 23.26 |
| GSMUA_Achr3P13070_001 | Banana | nucleus | 25.77 | 23.1 |
| GSMUA_Achr8P25220_001 | Banana | nucleus | 25.77 | 22.64 |
| GSMUA_Achr9P22600_001 | Banana | nucleus | 24.62 | 22.22 |
| GSMUA_Achr1P09750_001 | Banana | nucleus | 25.0 | 21.89 |
| GSMUA_Achr4P09450_001 | Banana | nucleus | 25.38 | 21.85 |
| GSMUA_AchrUn_... | Banana | nucleus | 23.46 | 21.55 |
| GSMUA_Achr9P03720_001 | Banana | nucleus | 26.54 | 21.43 |
| GSMUA_Achr7P18390_001 | Banana | nucleus, plastid | 38.08 | 21.06 |
| GSMUA_Achr5P28780_001 | Banana | nucleus | 26.15 | 17.13 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr10P10800_001 | EnsemblPlants:GSMUA_Achr10T10800_001 | EnsemblPlantsGene:GSMUA_Achr10G10800_001 | Gene3D:1.10.10.60 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0005488 | InterPro:Homeobox-like_sf | InterPro:IPR017930 | InterPro:Myb_dom | InterPro:SANT/Myb |
| PANTHER:PTHR10641 | PANTHER:PTHR10641:SF496 | PFAM:PF00249 | PFscan:PS51294 | SEG:seg | SMART:SM00717 |
| SUPFAM:SSF46689 | UniParc:UPI00029579EE | UniProt:M0RH56 | MapMan:15.5.2.1 | : | : |
Description
Putative MYB transcription factor [Source:GMGC_GENE;Acc:GSMUA_Achr10G10800_001]
Coordinates
chr10:-:20485779..20486807
Molecular Weight (calculated)
29979.5 Da
IEP (calculated)
10.365
GRAVY (calculated)
-0.918
Length
260 amino acids
Sequence
(BLAST)
(BLAST)
001: MESTSSASAG SGGTKACRRG HWRPGEDEKL RQLVEEFGPR NWNSIAEKLK GRSGKSCRLR WFNQLDPRIN KRPFTEQEEE RLVAAQQVHG NQWALIARLF
101: PGRTDNAVKN HWHVIVARRH RERSKLVRKR PLQRFQILSD VELSSIHLLP QTYPNPKRSS SVYRRSSQLH DQPPRRYRRL PRWSLVACEE DAKYKKAAPL
201: DSGKCSSESD CCHAVNACEM VGHGDDSDMS IDHRAMNEKT DRRKNVPFID FLGEIFVPNA
101: PGRTDNAVKN HWHVIVARRH RERSKLVRKR PLQRFQILSD VELSSIHLLP QTYPNPKRSS SVYRRSSQLH DQPPRRYRRL PRWSLVACEE DAKYKKAAPL
201: DSGKCSSESD CCHAVNACEM VGHGDDSDMS IDHRAMNEKT DRRKNVPFID FLGEIFVPNA
001: MMCSRGHWRP AEDEKLRELV EQFGPHNWNA IAQKLSGRSG KSCRLRWFNQ LDPRINRNPF TEEEEERLLA SHRIHGNRWS VIARFFPGRT DNAVKNHWHV
101: IMARRGRERS KLRPRGLGHD GTVAATGMIG NYKDCDKERR LATTTAINFP YQFSHINHFQ VLKEFLTGKI GFRNSTTPIQ EGAIDQTKRP MEFYNFLQVN
201: TDSKIHELID NSRKDEEEDV DQNNRIPNEN CVPFFDFLSV GNSASQGLC
101: IMARRGRERS KLRPRGLGHD GTVAATGMIG NYKDCDKERR LATTTAINFP YQFSHINHFQ VLKEFLTGKI GFRNSTTPIQ EGAIDQTKRP MEFYNFLQVN
201: TDSKIHELID NSRKDEEEDV DQNNRIPNEN CVPFFDFLSV GNSASQGLC
Arabidopsis Description
MYB52Transcription factor MYB52 [Source:UniProtKB/Swiss-Prot;Acc:Q6R0C4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.