Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr10P... | Banana | nucleus | 77.45 | 70.07 |
| GSMUA_Achr11P... | Banana | nucleus | 39.27 | 59.02 |
| GSMUA_Achr3P09490_001 | Banana | nucleus | 67.27 | 57.99 |
| GSMUA_Achr9P17000_001 | Banana | nucleus | 62.91 | 56.91 |
| GSMUA_Achr9P04990_001 | Banana | nucleus | 57.82 | 52.65 |
| GSMUA_Achr10P... | Banana | nucleus | 60.73 | 52.02 |
| GSMUA_Achr3P16490_001 | Banana | nucleus | 31.64 | 51.79 |
| GSMUA_Achr6P32250_001 | Banana | nucleus | 64.0 | 50.87 |
| Os01t0274800-01 | Rice | nucleus | 48.0 | 49.81 |
| GSMUA_Achr9P29090_001 | Banana | nucleus | 36.0 | 47.14 |
| GSMUA_Achr3P07700_001 | Banana | nucleus | 34.91 | 46.83 |
| GSMUA_Achr5P27750_001 | Banana | nucleus | 42.55 | 46.43 |
| Zm00001d040423_P001 | Maize | nucleus | 48.36 | 44.63 |
| GSMUA_Achr9P15750_001 | Banana | nucleus | 33.82 | 44.08 |
| Zm00001d008251_P002 | Maize | nucleus | 47.64 | 43.81 |
| EES02758 | Sorghum | nucleus | 48.0 | 43.56 |
| GSMUA_Achr6P17630_001 | Banana | nucleus | 40.73 | 42.59 |
| Bra039036.1-P | Field mustard | nucleus | 29.82 | 42.49 |
| EES02759 | Sorghum | nucleus | 42.91 | 41.84 |
| GSMUA_Achr3P18970_001 | Banana | nucleus | 39.64 | 41.6 |
| TraesCS3B01G217100.1 | Wheat | nucleus | 47.27 | 41.53 |
| TraesCS3D01G191400.1 | Wheat | nucleus | 47.64 | 40.81 |
| GSMUA_Achr9P08480_001 | Banana | nucleus | 37.82 | 40.62 |
| HORVU3Hr1G038700.2 | Barley | nucleus | 48.36 | 40.3 |
| Zm00001d040426_P001 | Maize | nucleus | 40.73 | 40.29 |
| TraesCS3A01G187800.1 | Wheat | nucleus | 47.27 | 40.0 |
| AT5G39700.1 | Thale cress | nucleus | 26.55 | 38.42 |
| GSMUA_Achr11P... | Banana | nucleus | 37.82 | 37.82 |
| GSMUA_Achr10P... | Banana | nucleus | 35.64 | 37.69 |
| CDY67808 | Canola | nucleus | 21.45 | 37.11 |
| Bra025652.1-P | Field mustard | nucleus | 34.18 | 36.29 |
| CDY30264 | Canola | nucleus | 34.18 | 36.15 |
| CDY44415 | Canola | nucleus | 33.82 | 35.63 |
| GSMUA_Achr5P23290_001 | Banana | nucleus | 38.18 | 34.77 |
| GSMUA_Achr6P02580_001 | Banana | nucleus | 42.55 | 33.05 |
| CDY20004 | Canola | nucleus | 34.18 | 32.75 |
| Bra033078.1-P | Field mustard | nucleus | 33.82 | 32.52 |
| CDY66025 | Canola | nucleus | 33.45 | 31.94 |
| AT3G29020.2 | Thale cress | nucleus | 35.27 | 31.8 |
| CDY66170 | Canola | nucleus | 34.91 | 30.57 |
| GSMUA_Achr11P... | Banana | endoplasmic reticulum, golgi | 42.18 | 29.44 |
| GSMUA_Achr6P33470_001 | Banana | nucleus | 22.55 | 27.56 |
| GSMUA_Achr4P20150_001 | Banana | nucleus | 25.82 | 26.39 |
| CDX74436 | Canola | nucleus | 34.18 | 26.04 |
| GSMUA_Achr4P12950_001 | Banana | nucleus | 24.73 | 25.56 |
| GSMUA_Achr1P26140_001 | Banana | nucleus | 25.45 | 24.82 |
| GSMUA_AchrUn_... | Banana | nucleus | 25.09 | 24.38 |
| GSMUA_Achr1P09750_001 | Banana | nucleus | 26.18 | 24.24 |
| GSMUA_Achr4P09450_001 | Banana | nucleus | 26.18 | 23.84 |
| GSMUA_Achr3P13070_001 | Banana | nucleus | 25.09 | 23.79 |
| GSMUA_Achr9P22600_001 | Banana | nucleus | 24.36 | 23.26 |
| GSMUA_Achr3P28230_001 | Banana | nucleus | 24.0 | 22.92 |
| GSMUA_Achr8P25220_001 | Banana | nucleus | 24.36 | 22.64 |
| GSMUA_Achr7P18390_001 | Banana | nucleus, plastid | 37.45 | 21.91 |
| GSMUA_Achr9P03720_001 | Banana | nucleus | 23.64 | 20.19 |
| GSMUA_Achr5P28780_001 | Banana | nucleus | 22.91 | 15.87 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr6P15900_001 | EnsemblPlants:GSMUA_Achr6T15900_001 | EnsemblPlantsGene:GSMUA_Achr6G15900_001 | Gene3D:1.10.10.60 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0005488 | InterPro:Homeobox-like_sf | InterPro:IPR017930 | InterPro:Myb_dom | InterPro:SANT/Myb |
| PANTHER:PTHR10641 | PANTHER:PTHR10641:SF697 | PFAM:PF00249 | PFscan:PS51294 | SEG:seg | SMART:SM00717 |
| SUPFAM:SSF46689 | UniParc:UPI0002967107 | UniProt:M0T7D8 | MapMan:15.5.2.1 | : | : |
Description
MYB family transcription factor, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr6G15900_001]
Coordinates
chr6:-:10625059..10626300
Molecular Weight (calculated)
30764.0 Da
IEP (calculated)
6.837
GRAVY (calculated)
-0.641
Length
275 amino acids
Sequence
(BLAST)
(BLAST)
001: MSSSSGEREC MSGEQALGFQ CLAGVKEHYE EDEGGDDTTH ESGQQQKLCV RGHWRPAEDA RLKELVSQYG PQNWNLIAEK LDGRSGKSCR LRWFNQLDPR
101: INRSAFSEEE EERLLAAHRL YGNKWALIAR LFPGRTDNAV KNHWHVIMAR KHREQDESAS TCTDLSLNSF TSRALPHLLN ISTSPTRRLH PYAIYNGLHE
201: SVLPAKNGCY GKLSVAPMEL LPGVDQADYP YSTSEASASD TVAFHMSNAW PHGGTAHGRE KIRIPFIDFL GVGAT
101: INRSAFSEEE EERLLAAHRL YGNKWALIAR LFPGRTDNAV KNHWHVIMAR KHREQDESAS TCTDLSLNSF TSRALPHLLN ISTSPTRRLH PYAIYNGLHE
201: SVLPAKNGCY GKLSVAPMEL LPGVDQADYP YSTSEASASD TVAFHMSNAW PHGGTAHGRE KIRIPFIDFL GVGAT
001: MNPNLLEKDL RGKETTNGSI RYKEANNFRS LPNSHTAACK TSLNNPSISR NHPHNKSASV LESEDEHGNE RGENEKSLRM RGKSGINTKV CSRGHWRPTE
101: DAKLKELVAQ FGPQNWNLIS NHLLGRSGKS CRLRWFNQLD PRINKRAFTE EEEFRLLAAH RAYGNKWALI SRLFPGRTDN AVKNHWHVIM ARRTRESQRQ
201: RQQPPPTLSR DAEMTVSSSC RYNQGKFINE EDDDDDVSAV STCTTELSLT PPSSAYQPRF FNYDSTLASG KDGQCVQRAE VNGIYGKKMD HQNHHTISVS
301: ERKVEMKMRS GYYYFDFLGV GAS
101: DAKLKELVAQ FGPQNWNLIS NHLLGRSGKS CRLRWFNQLD PRINKRAFTE EEEFRLLAAH RAYGNKWALI SRLFPGRTDN AVKNHWHVIM ARRTRESQRQ
201: RQQPPPTLSR DAEMTVSSSC RYNQGKFINE EDDDDDVSAV STCTTELSLT PPSSAYQPRF FNYDSTLASG KDGQCVQRAE VNGIYGKKMD HQNHHTISVS
301: ERKVEMKMRS GYYYFDFLGV GAS
Arabidopsis Description
MYB56Transcription factor MYB56 [Source:UniProtKB/Swiss-Prot;Acc:Q6R053]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.