Factsheet for Os01t0274800-01

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d008251_P002	Maize	nucleus	67.92	60.2
TraesCS3B01G217100.1	Wheat	nucleus	69.06	58.47
EES02758	Sorghum	nucleus	66.79	58.42
Zm00001d040423_P001	Maize	nucleus	65.66	58.39
HORVU3Hr1G038700.2	Barley	nucleus	72.08	57.88
TraesCS3D01G191400.1	Wheat	nucleus	69.43	57.32
TraesCS3A01G187800.1	Wheat	nucleus	70.19	57.23
EES02759	Sorghum	nucleus	59.62	56.03
GSMUA_Achr6P15900_001	Banana	nucleus	49.81	48.0
Zm00001d040426_P001	Maize	nucleus	48.3	46.04
GSMUA_Achr10P...	Banana	nucleus	52.45	45.72
GSMUA_Achr9P04990_001	Banana	nucleus	52.08	45.7
Bra039036.1-P	Field mustard	nucleus	32.83	45.08
GSMUA_Achr9P17000_001	Banana	nucleus	50.19	43.75
Os03t0720800-01	Rice	nucleus	40.38	43.67
GSMUA_Achr5P27750_001	Banana	nucleus	41.51	43.65
Os08t0435700-00	Rice	nucleus	42.26	43.41
GSMUA_Achr10P...	Banana	nucleus	52.08	42.99
AT5G39700.1	Thale cress	nucleus	30.19	42.11
GSMUA_Achr3P09490_001	Banana	nucleus	49.43	41.07
GSMUA_Achr6P32250_001	Banana	nucleus	52.83	40.46
Os11t0207600-00	Rice	nucleus, plastid	39.25	38.95
CDY44415	Canola	nucleus	36.23	36.78
Bra025652.1-P	Field mustard	nucleus	35.47	36.29
CDY30264	Canola	nucleus	34.72	35.38
CDY67808	Canola	nucleus	21.13	35.22
Bra033078.1-P	Field mustard	nucleus	36.23	33.57
CDY20004	Canola	nucleus	36.23	33.45
CDY66025	Canola	nucleus	35.47	32.64
AT3G29020.2	Thale cress	nucleus	36.98	32.13
CDY66170	Canola	nucleus	36.6	30.89
GSMUA_Achr11P...	Banana	endoplasmic reticulum, golgi	43.77	29.44
Os01t0977300-01	Rice	nucleus	26.42	28.0
Os08t0450900-00	Rice	nucleus	20.75	27.5
CDX74436	Canola	nucleus	35.09	25.76
Os02t0187700-00	Rice	nucleus	26.79	23.59
Os09t0106700-01	Rice	nucleus	27.55	22.88
Os06t0637500-02	Rice	cytosol, mitochondrion, nucleus	25.66	21.86
Os01t0850400-01	Rice	nucleus	27.55	17.68
Os05t0350900-01	Rice	nucleus	9.81	12.32
Os08t0435725-00	Rice	cytosol	3.77	10.0

Protein Annotations

Gene3D:1.10.10.60	MapMan:15.5.2.1	GO:GO:0000981	GO:GO:0001135	GO:GO:0003674	GO:GO:0003676
GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0006357	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0030154	GO:GO:0043565	GO:GO:0044212
InterPro:Homeobox-like_sf	InterPro:IPR017930	InterPro:Myb_dom	EnsemblPlantsGene:Os01g0274800	EnsemblPlants:Os01t0274800-01	PFAM:PF00249
PFscan:PS51294	PANTHER:PTHR10641	PANTHER:PTHR10641:SF473	InterPro:SANT/Myb	SMART:SM00717	SUPFAM:SSF46689
UniParc:UPI000049E676	SEG:seg	:	:	:	:

Description

CARBON STARVED ANTHERR2R3-type MYB transcription factor, Sugar partitioning into anther (Os01t0274800-01)

Coordinates

chr1:-:9567528..9569192

Molecular Weight (calculated)

28713.4 Da

IEP (calculated)

7.433

GRAVY (calculated)

-0.624

Length

265 amino acids

Sequence
(BLAST)

001: MAHEMMGGFF GHPPPPPATA AVGEEEDEVV EETEEGGHGG GVQGKLCARG HWRPAEDAKL KDLVAQYGPQ NWNLIAEKLD GRSGKSCRLR WFNQLDPRIN
101: RRAFTEEEEE RLMAAHRAYG NKWALIARLF PGRTDNAVKN HWHVLMARRH REQSGAFRRR KPSSSSASPA PAPAPPPPPQ PVVALHHHHH RYSQQYSGYS
201: GAAESDESAS TCTTDLSLSS GSAAAAAAAA AAANIPCCFY QRGGAQATTD SHTIPFFDFL GVGAT

Best Arabidopsis Sequence Match ( AT1G69560.1 )
(BLAST)

001: MEMVHADVAS LSITPCFPSS LSSSSHHHYN QQQHCIMSED QHHSMDQTTS SDYFSLNIDN AQHLRSYYTS HREEDMNPNL SDYSNCNKKD TTVYRSCGHS
101: SKASVSRGHW RPAEDTKLKE LVAVYGPQNW NLIAEKLQGR SGKSCRLRWF NQLDPRINRR AFTEEEEERL MQAHRLYGNK WAMIARLFPG RTDNSVKNHW
201: HVIMARKFRE QSSSYRRRKT MVSLKPLINP NPHIFNDFDP TRLALTHLAS SDHKQLMLPV PCFPGYDHEN ESPLMVDMFE TQMMVGDYIA WTQEATTFDF
301: LNQTGKSEIF ERINEEKKPP FFDFLGLGTV

Arabidopsis Description

MYB105myb domain protein 105 [Source:TAIR;Acc:AT1G69560]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.