Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4A01G047900.1 | Wheat | nucleus | 58.5 | 61.58 |
| EES13945 | Sorghum | nucleus | 64.0 | 56.89 |
| CDX83109 | Canola | nucleus | 28.5 | 35.19 |
| Os01t0977300-01 | Rice | nucleus | 33.5 | 26.8 |
| Os02t0187700-00 | Rice | nucleus | 34.5 | 22.92 |
| Os06t0637500-02 | Rice | cytosol, mitochondrion, nucleus | 35.0 | 22.51 |
| Os09t0106700-01 | Rice | nucleus | 35.5 | 22.26 |
| Os01t0274800-01 | Rice | nucleus | 27.5 | 20.75 |
| Os03t0720800-01 | Rice | nucleus | 24.5 | 20.0 |
| Os11t0207600-00 | Rice | nucleus, plastid | 26.5 | 19.85 |
| Os08t0435700-00 | Rice | nucleus | 25.0 | 19.38 |
| Os05t0350900-01 | Rice | nucleus | 18.5 | 17.54 |
| CDY43567 | Canola | nucleus | 18.5 | 17.05 |
| Os01t0850400-01 | Rice | nucleus | 29.5 | 14.29 |
| CDX83108 | Canola | cytosol | 0.5 | 2.56 |
| Os08t0435725-00 | Rice | cytosol | 0.0 | 0.0 |
Protein Annotations
| Gene3D:1.10.10.60 | EntrezGene:107275352 | MapMan:15.5.2.1 | ProteinID:BAD08736.1 | ProteinID:BAT05700.1 | GO:GO:0000981 |
| GO:GO:0001135 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006357 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0030154 | GO:GO:0043565 |
| GO:GO:0044212 | InterPro:Homeobox-like_sf | InterPro:IPR017930 | InterPro:Myb_dom | EnsemblPlantsGene:Os08g0450900 | EnsemblPlants:Os08t0450900-00 |
| PFAM:PF00249 | PFscan:PS51294 | PANTHER:PTHR10641 | PANTHER:PTHR10641:SF504 | UniProt:Q6ZLF1 | InterPro:SANT/Myb |
| SMART:SM00717 | SUPFAM:SSF46689 | UniParc:UPI000023ABC7 | RefSeq:XP_015649306.1 | SEG:seg | : |
Description
SANT domain, DNA binding domain containing protein. (Os08t0450900-00)
Coordinates
chr8:+:22012617..22013219
Molecular Weight (calculated)
21606.5 Da
IEP (calculated)
6.514
GRAVY (calculated)
-0.458
Length
200 amino acids
Sequence
(BLAST)
(BLAST)
001: MAADGGDGSG GGRKTPWTQE EDEALRRAVR EHRRQNWAEI ALALPRRGPK SCRLRWCQHL SPELDSRVFT AEEDAIILAQ QRVHGNKWAT IARCLPGRYD
101: NAVKNRWNSA LRKLLQVQHA SGAGSPPAAA AAAAGDDRDD APVCLQLFPA RAGGVKEAGL FAGEKDVEEE DVATSLTLGL PVLCEAELEL RLGPAWPATA
101: NAVKNRWNSA LRKLLQVQHA SGAGSPPAAA AAAAGDDRDD APVCLQLFPA RAGGVKEAGL FAGEKDVEEE DVATSLTLGL PVLCEAELEL RLGPAWPATA
001: MADRVKGPWS QEEDEQLRRM VEKYGPRNWS AISKSIPGRS GKSCRLRWCN QLSPEVEHRP FSPEEDETIV TARAQFGNKW ATIARLLNGR TDNAVKNHWN
101: STLKRKCSGG VAVTTVTETE EDQDRPKKRR SVSFDSAFAP VDTGLYMSPE SPNGIDVSDS STIPSPSSPV AQLFKPMPIS GGFTVVPQPL PVEMSSSSED
201: PPTSLSLSLP GAENTSSSHN NNNNALMFPR FESQMKINVE ERGEGRRGEF MTVVQEMIKA EVRSYMAEMQ KTSGGFVVGG LYESGGNGGF RDCGVITPKV
301: E
101: STLKRKCSGG VAVTTVTETE EDQDRPKKRR SVSFDSAFAP VDTGLYMSPE SPNGIDVSDS STIPSPSSPV AQLFKPMPIS GGFTVVPQPL PVEMSSSSED
201: PPTSLSLSLP GAENTSSSHN NNNNALMFPR FESQMKINVE ERGEGRRGEF MTVVQEMIKA EVRSYMAEMQ KTSGGFVVGG LYESGGNGGF RDCGVITPKV
301: E
Arabidopsis Description
MYB77Transcription factor MYB77 [Source:UniProtKB/Swiss-Prot;Acc:Q9SN12]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.