CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	mitochondrion
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os08t0450900-00	Rice	nucleus	56.89	64.0
TraesCS4A01G047900.1	Wheat	nucleus	51.56	61.05
CDX83109	Canola	nucleus	24.44	33.95
OQU75658	Sorghum	nucleus	29.33	23.16
EES04668	Sorghum	nucleus	32.44	22.32
EER90085	Sorghum	nucleus	30.67	22.04
EES18041	Sorghum	nucleus	34.22	21.57
EER93554	Sorghum	nucleus	21.78	20.5
EES15780	Sorghum	nucleus	22.22	19.84
EER98550	Sorghum	nucleus	31.11	19.13
EES02758	Sorghum	nucleus	24.89	18.48
EES09660	Sorghum	nucleus	22.67	18.48
EES02759	Sorghum	nucleus	22.67	18.09
CDY43567	Canola	nucleus	16.0	16.59
EES02760	Sorghum	nucleus	18.67	15.73
OQU87862	Sorghum	nucleus	25.78	14.54
OQU80507	Sorghum	nucleus	23.56	7.76
CDX83108	Canola	cytosol	1.33	7.69

Protein Annotations

Gene3D:1.10.10.60	MapMan:15.5.2.1	EntrezGene:8077877	UniProt:C5YLR9	EnsemblPlants:EES13945	ProteinID:EES13945
ProteinID:EES13945.1	GO:GO:0000981	GO:GO:0001135	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0006139	GO:GO:0006357	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
GO:GO:0030154	GO:GO:0043565	GO:GO:0044212	InterPro:Homeobox-like_sf	InterPro:IPR017930	InterPro:Myb_dom
PFAM:PF00249	PFscan:PS51294	PANTHER:PTHR10641	PANTHER:PTHR10641:SF504	InterPro:SANT/Myb	SMART:SM00717
EnsemblPlantsGene:SORBI_3007G146500	SUPFAM:SSF46689	UniParc:UPI0001A879DD	RefSeq:XP_002444450.1	SEG:seg	:

Description

hypothetical protein

Coordinates

chr7:+:57642054..57642731

Molecular Weight (calculated)

24240.5 Da

IEP (calculated)

5.423

GRAVY (calculated)

-0.445

Length

225 amino acids

Sequence
(BLAST)

001: MAAAQCGEGK AADCKKTPWT EKEDEALRRA VREHGRQNWA AIAGAVAGRG AKSCRLRWCQ HLAPELDSRP FTPEEDARIV ELQGVHGNKW ATIARFLHGR
101: SDNAVKNRWN SALRKMHQQG YYPAAVAAAA EDDAEDTDGQ AAEAVVCLDL FPLRARAMGE ATAADRLVVR EEEVEGEGDV AVEPIGLGLK LGSPGLSDAE
201: LELSLGPVRP SSSNRGEAAS FRLCL

Best Arabidopsis Sequence Match ( AT3G50060.1 )
(BLAST)

001: MADRVKGPWS QEEDEQLRRM VEKYGPRNWS AISKSIPGRS GKSCRLRWCN QLSPEVEHRP FSPEEDETIV TARAQFGNKW ATIARLLNGR TDNAVKNHWN
101: STLKRKCSGG VAVTTVTETE EDQDRPKKRR SVSFDSAFAP VDTGLYMSPE SPNGIDVSDS STIPSPSSPV AQLFKPMPIS GGFTVVPQPL PVEMSSSSED
201: PPTSLSLSLP GAENTSSSHN NNNNALMFPR FESQMKINVE ERGEGRRGEF MTVVQEMIKA EVRSYMAEMQ KTSGGFVVGG LYESGGNGGF RDCGVITPKV
301: E

Arabidopsis Description

MYB77Transcription factor MYB77 [Source:UniProtKB/Swiss-Prot;Acc:Q9SN12]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.