Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
- plastid 1
Predictors | GFP | MS/MS | Papers |
---|---|---|---|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
Zm00001d012379_P001 | Maize | nucleus | 85.71 | 85.29 |
Os01t0850400-01 | Rice | nucleus | 65.16 | 62.95 |
TraesCS3A01G365200.1 | Wheat | nucleus | 61.15 | 52.81 |
TraesCS3B01G397100.1 | Wheat | nucleus | 61.15 | 52.14 |
TraesCS3D01G358400.1 | Wheat | nucleus | 60.9 | 51.81 |
HORVU3Hr1G085570.1 | Barley | plastid | 56.64 | 49.02 |
GSMUA_Achr6P33470_001 | Banana | nucleus | 26.32 | 46.67 |
GSMUA_Achr9P03720_001 | Banana | nucleus | 35.84 | 44.41 |
KRG88785 | Soybean | nucleus | 37.34 | 42.33 |
KRH75766 | Soybean | nucleus | 37.09 | 42.29 |
PGSC0003DMT400052395 | Potato | nucleus | 37.59 | 39.58 |
Solyc09g011780.2.1 | Tomato | nucleus | 37.59 | 39.47 |
PGSC0003DMT400069921 | Potato | nucleus | 36.09 | 38.5 |
VIT_13s0019g03200.t01 | Wine grape | nucleus | 36.34 | 38.36 |
Solyc05g052850.2.1 | Tomato | nucleus | 35.84 | 38.24 |
VIT_08s0007g01540.t01 | Wine grape | nucleus | 37.34 | 36.34 |
CDX72208 | Canola | nucleus | 33.08 | 35.87 |
Bra007186.1-P | Field mustard | nucleus | 33.33 | 35.85 |
CDY27271 | Canola | nucleus | 33.33 | 35.66 |
KRH15016 | Soybean | nucleus | 34.84 | 35.37 |
AT3G55730.1 | Thale cress | nucleus | 35.09 | 35.09 |
CDY20494 | Canola | nucleus | 31.58 | 34.24 |
KRH73115 | Soybean | nucleus | 32.58 | 32.58 |
Bra005006.1-P | Field mustard | nucleus | 31.33 | 31.41 |
GSMUA_Achr5P28780_001 | Banana | nucleus | 30.58 | 30.73 |
CDX74825 | Canola | nucleus | 30.83 | 30.67 |
AT2G39880.1 | Thale cress | nucleus | 27.07 | 29.43 |
EER90085 | Sorghum | nucleus | 23.06 | 29.39 |
EES04668 | Sorghum | nucleus | 22.81 | 27.83 |
OQU75658 | Sorghum | nucleus | 19.8 | 27.72 |
EER93554 | Sorghum | nucleus | 16.29 | 27.2 |
EES13945 | Sorghum | nucleus | 14.54 | 25.78 |
EES09660 | Sorghum | nucleus | 17.79 | 25.72 |
EER98550 | Sorghum | nucleus | 23.56 | 25.68 |
EES15780 | Sorghum | nucleus | 15.79 | 25.0 |
EES18041 | Sorghum | nucleus | 21.8 | 24.37 |
EES02758 | Sorghum | nucleus | 18.05 | 23.76 |
EES02759 | Sorghum | nucleus | 16.79 | 23.76 |
EES02760 | Sorghum | nucleus | 15.54 | 23.22 |
OQU80507 | Sorghum | nucleus | 19.05 | 11.13 |
Protein Annotations
Gene3D:1.10.10.60 | MapMan:15.5.2.1 | EntrezGene:8058913 | UniProt:A0A1W0W0H5 | GO:GO:0003674 | GO:GO:0003676 |
GO:GO:0003677 | GO:GO:0005488 | InterPro:Homeobox-like_sf | InterPro:IPR017930 | InterPro:Myb_dom | EnsemblPlants:OQU87862 |
ProteinID:OQU87862 | ProteinID:OQU87862.1 | PFAM:PF00249 | PFscan:PS51294 | PANTHER:PTHR10641 | PANTHER:PTHR10641:SF524 |
InterPro:SANT/Myb | SMART:SM00717 | EnsemblPlantsGene:SORBI_3003G357300 | SUPFAM:SSF46689 | UniParc:UPI0001A851F1 | RefSeq:XP_002458769.1 |
SEG:seg | : | : | : | : | : |
Description
hypothetical protein
Coordinates
chr3:-:67562436..67564795
Molecular Weight (calculated)
42817.8 Da
IEP (calculated)
5.757
GRAVY (calculated)
-0.493
Length
399 amino acids
Sequence
(BLAST)
(BLAST)
001: MSAAETAVSP APQPPSDPNA AANADAAHSN SFSMADEAQT LTEALLQPQP NHMSPPPSGE EDDGVTASGA PVGGDAAASA AAAAAANATM EERVRGPWSP
101: EEDTVLSNLV EKLGARNWTL IARGIPGRSG KSCRLRWCNQ LDPQVKRKPF TEEEDRIIMA AHAVHGNKWA CIAKLLDGRT DNAIKNHWNS TLRRRYCNDG
201: RCKHGGSVQR SILEVSRAVS EEPWPSKDLS SFNAMDVSDA PVQTVPETSA GAWHITDQCS MTQGVDPPYL SRPAAKIGAF RPYNLGHTEP TQQEIPSSVV
301: KSDSTHKVLT PESEVFKFVD PICFSAEVPS KCGHGCCGAH KQPRKNSLLG PEFNEFEDHP PILNTSFASL VSEISSIAWM RSGMQSSDAS TLFQSVPPT
101: EEDTVLSNLV EKLGARNWTL IARGIPGRSG KSCRLRWCNQ LDPQVKRKPF TEEEDRIIMA AHAVHGNKWA CIAKLLDGRT DNAIKNHWNS TLRRRYCNDG
201: RCKHGGSVQR SILEVSRAVS EEPWPSKDLS SFNAMDVSDA PVQTVPETSA GAWHITDQCS MTQGVDPPYL SRPAAKIGAF RPYNLGHTEP TQQEIPSSVV
301: KSDSTHKVLT PESEVFKFVD PICFSAEVPS KCGHGCCGAH KQPRKNSLLG PEFNEFEDHP PILNTSFASL VSEISSIAWM RSGMQSSDAS TLFQSVPPT
001: MEGETHQSEP LPLASGDSDE GISAAIEAEL AELAAGDSSG GGGCGGGGGG IRSKVKGPWS TEEDAVLTKL VRKLGPRNWS LIARGIPGRS GKSCRLRWCN
101: QLDPCLKRKP FSDEEDRMII SAHAVHGNKW AVIAKLLTGR TDNAIKNHWN STLRRKYADL WNNGQWMANS VTTASVKNEN VDETTNPPSS KQQLPQGDIN
201: SSPPKPPQVS DVVMEEAANE PQEPQEQQEQ APPVVSNVPT ENNVFRPVAR VGAFSIYNPT SQKNGYRDYN IVPCEGPLIQ AAKPDSLAGK FLQSLCDEPQ
301: IPSKCGHGCS TLPAETKFSR NSVLGPEFVD YEEPSAVFNQ ELISIATDLN NIAWIKSGLD NAVVREAEQS LKMDNYNYND PRIKFTGMMP RQDFFCARS
101: QLDPCLKRKP FSDEEDRMII SAHAVHGNKW AVIAKLLTGR TDNAIKNHWN STLRRKYADL WNNGQWMANS VTTASVKNEN VDETTNPPSS KQQLPQGDIN
201: SSPPKPPQVS DVVMEEAANE PQEPQEQQEQ APPVVSNVPT ENNVFRPVAR VGAFSIYNPT SQKNGYRDYN IVPCEGPLIQ AAKPDSLAGK FLQSLCDEPQ
301: IPSKCGHGCS TLPAETKFSR NSVLGPEFVD YEEPSAVFNQ ELISIATDLN NIAWIKSGLD NAVVREAEQS LKMDNYNYND PRIKFTGMMP RQDFFCARS
Arabidopsis Description
MYB109MYB transcription factor-like protein [Source:UniProtKB/TrEMBL;Acc:Q9LDW5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.