CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH73115	Soybean	nucleus	71.5	70.43
VIT_13s0019g03200.t01	Wine grape	nucleus	50.38	52.38
KRH75766	Soybean	nucleus	45.04	50.57
GSMUA_Achr9P03720_001	Banana	nucleus	41.22	50.31
KRG88785	Soybean	nucleus	44.53	49.72
Solyc05g052850.2.1	Tomato	nucleus	43.26	45.45
PGSC0003DMT400069921	Potato	nucleus	42.75	44.92
KRH37830	Soybean	nucleus	16.03	44.37
GSMUA_Achr6P33470_001	Banana	nucleus	24.68	43.11
CDX72208	Canola	nucleus	38.42	41.03
Bra007186.1-P	Field mustard	nucleus	38.68	40.97
CDY27271	Canola	nucleus	38.68	40.75
AT3G55730.1	Thale cress	nucleus	41.22	40.6
KRH61246	Soybean	nucleus	21.63	40.48
CDY20494	Canola	nucleus	37.15	39.67
KRH51945	Soybean	nucleus	22.14	39.37
KRH14928	Soybean	nucleus	23.66	39.08
Bra005006.1-P	Field mustard	nucleus	37.66	37.19
CDX74825	Canola	nucleus	37.91	37.16
KRH73284	Soybean	nucleus	23.16	36.84
Os01t0850400-01	Rice	nucleus	38.68	36.8
KRH61351	Soybean	nucleus	23.92	36.29
OQU87862	Sorghum	nucleus	35.37	34.84
KRH05621	Soybean	nucleus	23.66	34.7
KRH28419	Soybean	nucleus	25.95	34.34
Zm00001d012379_P001	Maize	nucleus	34.86	34.16
KRH05732	Soybean	nucleus	21.12	33.6
AT2G39880.1	Thale cress	nucleus	31.3	33.52
KRH15420	Soybean	nucleus	22.65	32.6
KRH77058	Soybean	nucleus	25.19	32.46
KRH57983	Soybean	nucleus	24.17	32.2
HORVU3Hr1G085570.1	Barley	plastid	36.64	31.24
TraesCS3B01G397100.1	Wheat	nucleus	36.64	30.77
GSMUA_Achr5P28780_001	Banana	nucleus	31.04	30.73
TraesCS3A01G365200.1	Wheat	nucleus	35.88	30.52
KRG94450	Soybean	nucleus	12.21	30.38
TraesCS3D01G358400.1	Wheat	nucleus	36.13	30.28
KRH09502	Soybean	nucleus	16.79	28.21
KRH38975	Soybean	nucleus	16.54	27.43
KRH15916	Soybean	nucleus	14.76	23.97
KRH64569	Soybean	nucleus	20.1	23.37
KRH53362	Soybean	nucleus	19.59	23.26
KRG94926	Soybean	nucleus	18.32	19.05
KRH64970	Soybean	nucleus	18.32	17.78
KRH50566	Soybean	nucleus	19.59	17.66
KRH74887	Soybean	plastid	19.59	16.56
KRH70748	Soybean	nucleus	19.34	16.27
KRG89586	Soybean	nucleus	20.1	16.26

Protein Annotations

Gene3D:1.10.10.60	EntrezGene:100781228	MapMan:15.5.2.1	EMBL:ACUP02008549	EnsemblPlantsGene:GLYMA_14G063400	GO:GO:0000981
GO:GO:0001135	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006357
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0030154	GO:GO:0043565
GO:GO:0044212	InterPro:Homeobox-like_sf	InterPro:IPR017930	UniProt:K7M582	EnsemblPlants:KRH15016	ProteinID:KRH15016
ProteinID:KRH15016.1	InterPro:Myb_dom	PFAM:PF00249	PFscan:PS51294	PANTHER:PTHR10641	PANTHER:PTHR10641:SF524
InterPro:SANT/Myb	SMART:SM00717	SUPFAM:SSF46689	UniParc:UPI0001E24235	:	:

Description

hypothetical protein

Coordinates

chr14:+:5144548..5149286

Molecular Weight (calculated)

42863.4 Da

IEP (calculated)

6.055

GRAVY (calculated)

-0.529

Length

393 amino acids

Sequence
(BLAST)

001: MTEEDRSAQE TVHNGVASTE LGGEEMDIAE VTAAGRVKGP WSPEEDALLS RLVAQFGARN WSMIARGVPG RSGKSCRLRW CNQLDPCVKR KPFTEEEDSI
101: IVSAHAIHGN KWAAIARLLP GRTDNAIKNH WNSTLKRRCM EMGRYVPAHA DVMEDGTGSF DKTKASSEET MSIGDINSKN PAEVRNVMMD NENKPPTKDD
201: AKVEEHPTLH RPVARVSAFS VYNTPGRSTM GSCSKMFPRQ SPLIQSPKPD VGSCKLFDDI DCEPMVPSQC GHGCCTGDSR ESHSHGSLLG PEFVDYLESP
301: SSSHAFISIA TDLNNIAWIK SGLENCSTGV TENTANLTAS RGVASALQTN FLGQDLKNGY GQFEEGHGMF LGAMQEVLST KMARQHYAMP AEV

Best Arabidopsis Sequence Match ( AT3G55730.1 )
(BLAST)

001: MEGETHQSEP LPLASGDSDE GISAAIEAEL AELAAGDSSG GGGCGGGGGG IRSKVKGPWS TEEDAVLTKL VRKLGPRNWS LIARGIPGRS GKSCRLRWCN
101: QLDPCLKRKP FSDEEDRMII SAHAVHGNKW AVIAKLLTGR TDNAIKNHWN STLRRKYADL WNNGQWMANS VTTASVKNEN VDETTNPPSS KQQLPQGDIN
201: SSPPKPPQVS DVVMEEAANE PQEPQEQQEQ APPVVSNVPT ENNVFRPVAR VGAFSIYNPT SQKNGYRDYN IVPCEGPLIQ AAKPDSLAGK FLQSLCDEPQ
301: IPSKCGHGCS TLPAETKFSR NSVLGPEFVD YEEPSAVFNQ ELISIATDLN NIAWIKSGLD NAVVREAEQS LKMDNYNYND PRIKFTGMMP RQDFFCARS

Arabidopsis Description

MYB109MYB transcription factor-like protein [Source:UniProtKB/TrEMBL;Acc:Q9LDW5]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.