CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH14928	Soybean	nucleus	85.43	88.66
VIT_13s0067g01360.t01	Wine grape	nucleus	51.82	50.59
KRH37830	Soybean	nucleus	25.1	43.66
KRH61246	Soybean	nucleus	36.44	42.86
KRH51945	Soybean	nucleus	36.03	40.27
KRH61351	Soybean	nucleus	40.49	38.61
KRH05621	Soybean	nucleus	39.68	36.57
KRH15420	Soybean	nucleus	40.08	36.26
KRH57983	Soybean	nucleus	42.11	35.25
KRH05732	Soybean	nucleus	34.41	34.41
KRH28419	Soybean	nucleus	41.3	34.34
KRH77058	Soybean	nucleus	41.7	33.77
KRH75766	Soybean	nucleus	37.25	26.29
KRG88785	Soybean	nucleus	37.25	26.14
KRG94450	Soybean	nucleus	16.19	25.32
KRH38975	Soybean	nucleus	22.67	23.63
KRH09502	Soybean	nucleus	22.27	23.5
KRH15016	Soybean	nucleus	36.84	23.16
KRH15916	Soybean	nucleus	21.86	22.31
KRH73115	Soybean	nucleus	33.6	20.8
KRH53362	Soybean	nucleus	25.51	19.03
KRH64569	Soybean	nucleus	25.91	18.93
KRG94926	Soybean	nucleus	25.51	16.67
KRH64970	Soybean	nucleus	25.1	15.31
KRH50566	Soybean	nucleus	24.7	13.99
KRH70748	Soybean	nucleus	24.7	13.06
KRH74887	Soybean	plastid	23.89	12.69
KRG89586	Soybean	nucleus	24.29	12.35

Protein Annotations

Gene3D:1.10.10.60	MapMan:15.5.2.1	EntrezGene:778069	EMBL:ACUP02001273	ncoils:Coil	EnsemblPlantsGene:GLYMA_02G264900
GO:GO:0000981	GO:GO:0001135	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139
GO:GO:0006357	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0030154
GO:GO:0043565	GO:GO:0044212	InterPro:Homeobox-like_sf	UniProt:I1JIG1	InterPro:IPR017930	ProteinID:KRH73283.1
EnsemblPlants:KRH73284	ProteinID:KRH73284	ProteinID:KRH73284.1	InterPro:Myb_dom	PFAM:PF00249	PFscan:PS51294
PANTHER:PTHR10641	PANTHER:PTHR10641:SF553	InterPro:SANT/Myb	SMART:SM00717	SUPFAM:SSF46689	UniParc:UPI0002336BC7
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr2:-:45000524..45002560

Molecular Weight (calculated)

28246.2 Da

IEP (calculated)

6.722

GRAVY (calculated)

-0.907

Length

247 amino acids

Sequence
(BLAST)

001: MTGGHDRVKG SWSPQEDATL LKLVNEHGAR NWSVISAGIS GRSGKSCRLR WCNQLSPEVQ HRPFTPAEDK MIIKAHAIHG NKWATISRLL PGRTDNAIKN
101: HWNSTLRRRR AVESSSSSSA SPPAKRHSSL FDTLHPFKKQ CIEKENEEER VLSPVTTSLS LFPPGEKSEE EEEEEEQEEE EKEKEELFQV NVNVNQKVTD
201: QNYFMQMMQR MIAEEVRNYM ETLRNCQRNN GLSLEPGLDL LPPTLPK

Best Arabidopsis Sequence Match ( AT2G23290.1 )
(BLAST)

001: MSGSTRKEMD RIKGPWSPEE DDLLQSLVQK HGPRNWSLIS KSIPGRSGKS CRLRWCNQLS PEVEHRGFTA EEDDTIILAH ARFGNKWATI ARLLNGRTDN
101: AIKNHWNSTL KRKCSGGGGG GEEGQSCDFG GNGGYDGNLT DEKPLKRRAS GGGGVVVVTA LSPTGSDVSE QSQSSGSVLP VSSSCHVFKP TARAGGVVIE
201: SSSPEEEEKD PMTCLRLSLP WVNESTTPPE LFPVKREEEE EKEREISGLG GDFMTVVQEM IKTEVRSYMA DLQLGNGGGA GGGASSCMVQ GTNGRNVGFR
301: EFIGLGRIE

Arabidopsis Description

AtMYB70At2g23280 [Source:UniProtKB/TrEMBL;Acc:O22179]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.