Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH53362 | Soybean | nucleus | 91.42 | 93.35 |
| GSMUA_Achr3P16490_001 | Banana | nucleus | 31.07 | 62.5 |
| VIT_18s0001g15260.t01 | Wine grape | nucleus | 54.44 | 57.32 |
| Zm00001d004681_P001 | Maize | nucleus | 31.66 | 56.02 |
| GSMUA_Achr9P08480_001 | Banana | nucleus | 40.53 | 53.52 |
| KRH09502 | Soybean | nucleus | 34.91 | 50.43 |
| PGSC0003DMT400063862 | Potato | nucleus | 44.67 | 50.0 |
| Solyc04g064540.2.1 | Tomato | nucleus | 45.27 | 49.51 |
| KRH38975 | Soybean | nucleus | 34.62 | 49.37 |
| KRG94450 | Soybean | nucleus | 22.49 | 48.1 |
| GSMUA_Achr6P17630_001 | Banana | nucleus | 36.98 | 47.53 |
| TraesCS4B01G105200.1 | Wheat | nucleus | 38.46 | 47.27 |
| Zm00001d041818_P001 | Maize | nucleus | 31.07 | 46.67 |
| TraesCS4D01G102100.1 | Wheat | nucleus | 38.17 | 46.57 |
| GSMUA_Achr10P... | Banana | nucleus | 35.8 | 46.54 |
| HORVU4Hr1G017040.2 | Barley | nucleus | 38.17 | 46.4 |
| TraesCS4A01G211100.1 | Wheat | nucleus | 37.87 | 46.38 |
| EES09660 | Sorghum | nucleus | 37.28 | 45.65 |
| Os11t0207600-00 | Rice | nucleus, plastid | 35.8 | 45.32 |
| Zm00001d049079_P001 | Maize | nucleus | 36.98 | 45.13 |
| GSMUA_Achr3P18970_001 | Banana | nucleus | 34.02 | 43.89 |
| AT4G33450.1 | Thale cress | nucleus | 32.25 | 43.6 |
| CDY71713 | Canola | nucleus | 29.59 | 43.48 |
| EES15780 | Sorghum | nucleus | 31.66 | 42.46 |
| CDX68977 | Canola | nucleus | 31.07 | 42.0 |
| CDY28302 | Canola | nucleus | 31.07 | 41.83 |
| CDX75353 | Canola | nucleus | 30.77 | 41.43 |
| Bra034565.1-P | Field mustard | nucleus | 30.77 | 41.43 |
| Bra011441.1-P | Field mustard | nucleus | 30.47 | 41.37 |
| KRH37830 | Soybean | nucleus | 15.38 | 36.62 |
| KRH15916 | Soybean | nucleus | 25.74 | 35.95 |
| KRH61246 | Soybean | nucleus | 19.82 | 31.9 |
| KRH51945 | Soybean | nucleus | 18.93 | 28.96 |
| KRG94926 | Soybean | nucleus | 32.25 | 28.84 |
| KRH05621 | Soybean | nucleus | 22.78 | 28.73 |
| KRH61351 | Soybean | nucleus | 21.89 | 28.57 |
| KRH15420 | Soybean | nucleus | 22.49 | 27.84 |
| KRH64970 | Soybean | nucleus | 32.84 | 27.41 |
| KRH14928 | Soybean | nucleus | 18.93 | 26.89 |
| KRH28419 | Soybean | nucleus | 22.78 | 25.93 |
| KRH50566 | Soybean | nucleus | 33.43 | 25.92 |
| KRH73284 | Soybean | nucleus | 18.93 | 25.91 |
| KRH74887 | Soybean | plastid | 35.5 | 25.81 |
| KRH57983 | Soybean | nucleus | 22.49 | 25.76 |
| KRH05732 | Soybean | nucleus | 18.64 | 25.51 |
| KRH70748 | Soybean | nucleus | 34.91 | 25.27 |
| KRH77058 | Soybean | nucleus | 22.49 | 24.92 |
| KRG89586 | Soybean | nucleus | 33.73 | 23.46 |
| KRH75766 | Soybean | nucleus | 23.96 | 23.14 |
| KRG88785 | Soybean | nucleus | 23.96 | 23.01 |
| KRH15016 | Soybean | nucleus | 23.37 | 20.1 |
| KRH73115 | Soybean | nucleus | 22.78 | 19.3 |
Protein Annotations
| Gene3D:1.10.10.60 | EntrezGene:100817328 | MapMan:15.5.2.1 | UniProt:A0A0R0KHA6 | EMBL:ACUP02002768 | EnsemblPlantsGene:GLYMA_04G242200 |
| GO:GO:0000981 | GO:GO:0001135 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 |
| GO:GO:0006357 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0030154 |
| GO:GO:0043565 | GO:GO:0044212 | InterPro:Homeobox-like_sf | InterPro:IPR017930 | EnsemblPlants:KRH64569 | ProteinID:KRH64569 |
| ProteinID:KRH64569.1 | InterPro:Myb_dom | PFAM:PF13921 | PFscan:PS51294 | PANTHER:PTHR10641 | PANTHER:PTHR10641:SF496 |
| InterPro:SANT/Myb | SMART:SM00717 | SUPFAM:SSF46689 | UniParc:UPI00054A1D1E | SEG:seg | : |
Description
hypothetical protein
Coordinates
chr4:+:51026128..51027901
Molecular Weight (calculated)
39010.9 Da
IEP (calculated)
8.923
GRAVY (calculated)
-0.993
Length
338 amino acids
Sequence
(BLAST)
(BLAST)
001: MEDSSAGEDT RTCPRGHWRP AEDEKLRQLV EQYGAQNWNS IAEKLQGRSG KSCRLRWFNQ LDPRINRRPF TEEEEERLLA AHRIHGNKWA LIARLFPGRT
101: DNAVKNHWHV IMARKQREQS KLCGKRSFQD VYNDSNNTFL EKRTTPQSHH QDMLFSTTRF GLENGRFFDF RSLDNNKDDD NNYRIVSDTT SSTSLASWNF
201: ASVPTTTSTT TKGARDYFNT SRSSSVYLSE CSRSSDRSFL YRIYPNPAFS LPNYKRVVPT SPFRTFLGSS DHHDGRIIKR DLMSFCDNNN NNSSSTFSKL
301: KASTEKDHQQ QQTNEDETNV EPKEVPFIDF LGVGVSSS
101: DNAVKNHWHV IMARKQREQS KLCGKRSFQD VYNDSNNTFL EKRTTPQSHH QDMLFSTTRF GLENGRFFDF RSLDNNKDDD NNYRIVSDTT SSTSLASWNF
201: ASVPTTTSTT TKGARDYFNT SRSSSVYLSE CSRSSDRSFL YRIYPNPAFS LPNYKRVVPT SPFRTFLGSS DHHDGRIIKR DLMSFCDNNN NNSSSTFSKL
301: KASTEKDHQQ QQTNEDETNV EPKEVPFIDF LGVGVSSS
001: MMCSRGHWRP AEDEKLRELV EQFGPHNWNA IAQKLSGRSG KSCRLRWFNQ LDPRINRNPF TEEEEERLLA SHRIHGNRWS VIARFFPGRT DNAVKNHWHV
101: IMARRGRERS KLRPRGLGHD GTVAATGMIG NYKDCDKERR LATTTAINFP YQFSHINHFQ VLKEFLTGKI GFRNSTTPIQ EGAIDQTKRP MEFYNFLQVN
201: TDSKIHELID NSRKDEEEDV DQNNRIPNEN CVPFFDFLSV GNSASQGLC
101: IMARRGRERS KLRPRGLGHD GTVAATGMIG NYKDCDKERR LATTTAINFP YQFSHINHFQ VLKEFLTGKI GFRNSTTPIQ EGAIDQTKRP MEFYNFLQVN
201: TDSKIHELID NSRKDEEEDV DQNNRIPNEN CVPFFDFLSV GNSASQGLC
Arabidopsis Description
MYB52Transcription factor MYB52 [Source:UniProtKB/Swiss-Prot;Acc:Q6R0C4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.