Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra011441.1-P | Field mustard | nucleus | 98.8 | 99.6 |
| CDX68977 | Canola | nucleus | 95.22 | 95.6 |
| CDY71713 | Canola | nucleus | 78.88 | 86.09 |
| CDY28302 | Canola | nucleus | 86.06 | 86.06 |
| AT4G33450.1 | Thale cress | nucleus | 82.47 | 82.8 |
| CDY21728 | Canola | nucleus | 34.26 | 54.78 |
| CDY35992 | Canola | nucleus | 33.86 | 54.14 |
| GSMUA_Achr3P16490_001 | Banana | nucleus | 32.27 | 48.21 |
| CDX83880 | Canola | nucleus | 34.26 | 47.25 |
| Zm00001d004681_P001 | Maize | nucleus | 35.06 | 46.07 |
| CDX96475 | Canola | nucleus | 41.04 | 45.18 |
| CDX72988 | Canola | nucleus | 40.64 | 45.13 |
| CDX82074 | Canola | nucleus | 39.44 | 42.49 |
| CDY58312 | Canola | nucleus | 39.44 | 42.31 |
| Zm00001d041818_P001 | Maize | nucleus | 37.05 | 41.33 |
| CDX96742 | Canola | nucleus | 38.65 | 40.08 |
| CDX81853 | Canola | nucleus | 39.44 | 40.08 |
| GSMUA_Achr9P08480_001 | Banana | nucleus | 40.64 | 39.84 |
| CDY46114 | Canola | nucleus | 37.85 | 39.42 |
| CDX72405 | Canola | nucleus | 37.85 | 39.42 |
| CDY21727 | Canola | nucleus | 38.65 | 38.65 |
| GSMUA_Achr10P... | Banana | nucleus | 39.44 | 38.08 |
| GSMUA_Achr6P17630_001 | Banana | nucleus | 38.65 | 36.88 |
| EES09660 | Sorghum | nucleus | 39.84 | 36.23 |
| Zm00001d049079_P001 | Maize | nucleus | 39.84 | 36.1 |
| VIT_04s0044g01380.t01 | Wine grape | nucleus | 43.43 | 36.09 |
| GSMUA_Achr3P18970_001 | Banana | nucleus | 37.45 | 35.88 |
| EES15780 | Sorghum | nucleus | 35.86 | 35.71 |
| Os11t0207600-00 | Rice | nucleus, plastid | 37.45 | 35.21 |
| TraesCS4B01G105200.1 | Wheat | nucleus | 38.25 | 34.91 |
| TraesCS4A01G211100.1 | Wheat | nucleus | 38.25 | 34.78 |
| TraesCS4D01G102100.1 | Wheat | nucleus | 38.25 | 34.66 |
| HORVU4Hr1G017040.2 | Barley | nucleus | 38.25 | 34.53 |
| PGSC0003DMT400063862 | Potato | nucleus | 40.64 | 33.77 |
| Solyc04g064540.2.1 | Tomato | nucleus | 39.84 | 32.36 |
| CDX83109 | Canola | nucleus | 20.72 | 32.1 |
| KRH53362 | Soybean | nucleus | 42.23 | 32.02 |
| CDY30264 | Canola | nucleus | 32.67 | 31.54 |
| CDY44415 | Canola | nucleus | 32.27 | 31.03 |
| CDY67808 | Canola | nucleus | 19.52 | 30.82 |
| KRH64569 | Soybean | nucleus | 41.43 | 30.77 |
| CDY16884 | Canola | nucleus | 37.85 | 30.45 |
| CDX78761 | Canola | nucleus | 37.45 | 30.03 |
| CDX70776 | Canola | nucleus | 36.65 | 29.39 |
| CDY38460 | Canola | nucleus | 37.85 | 29.32 |
| CDX85443 | Canola | nucleus | 35.86 | 29.32 |
| CDY67868 | Canola | nucleus | 34.26 | 28.86 |
| CDY07345 | Canola | nucleus | 34.26 | 28.86 |
| CDY02687 | Canola | nucleus | 35.46 | 28.71 |
| CDY69058 | Canola | nucleus | 29.88 | 28.41 |
| CDY40941 | Canola | nucleus | 35.86 | 28.12 |
| CDX95921 | Canola | nucleus | 35.86 | 28.12 |
| CDY66025 | Canola | nucleus | 31.87 | 27.78 |
| CDY20004 | Canola | nucleus | 31.47 | 27.53 |
| CDY50737 | Canola | nucleus | 35.46 | 25.87 |
| CDY66170 | Canola | nucleus | 32.27 | 25.8 |
| CDY44993 | Canola | nucleus | 35.86 | 25.5 |
| CDY46444 | Canola | nucleus | 35.86 | 25.5 |
| CDY12830 | Canola | nucleus | 23.9 | 23.72 |
| CDX72621 | Canola | nucleus | 24.7 | 23.4 |
| CDY01420 | Canola | nucleus | 23.9 | 22.81 |
| CDX74436 | Canola | nucleus | 32.67 | 22.71 |
| CDY30608 | Canola | nucleus | 23.9 | 22.64 |
| CDY29542 | Canola | nucleus | 23.9 | 22.64 |
| CDY23023 | Canola | nucleus | 25.5 | 22.07 |
| CDY38933 | Canola | nucleus | 25.5 | 21.92 |
| CDX89554 | Canola | nucleus | 25.5 | 21.84 |
| CDY02098 | Canola | nucleus | 25.5 | 21.84 |
| CDY22442 | Canola | nucleus | 23.9 | 21.82 |
| CDY57355 | Canola | nucleus | 23.9 | 21.58 |
| CDX75635 | Canola | nucleus | 25.1 | 21.07 |
| CDY44045 | Canola | nucleus | 23.9 | 21.05 |
| CDX69287 | Canola | nucleus | 25.5 | 20.91 |
| CDX73963 | Canola | nucleus | 24.7 | 18.51 |
| CDY07907 | Canola | nucleus | 24.3 | 18.37 |
| CDX68566 | Canola | nucleus | 22.71 | 18.15 |
| CDY43567 | Canola | nucleus | 15.14 | 17.51 |
| CDY20494 | Canola | nucleus | 24.3 | 16.58 |
| CDY27271 | Canola | nucleus | 24.3 | 16.35 |
| CDX72208 | Canola | nucleus | 23.51 | 16.03 |
| CDX74825 | Canola | nucleus | 24.7 | 15.46 |
| CDY70901 | Canola | nucleus | 13.94 | 12.24 |
| CDY70773 | Canola | nucleus | 13.94 | 12.24 |
| CDX83108 | Canola | cytosol | 0.8 | 5.13 |
Protein Annotations
| EnsemblPlants:CDX75353 | EnsemblPlantsGene:GSBRNA2T00121233001 | Gene3D:1.10.10.60 | GO:A0A078CJV2 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0005488 | InterPro:Homeobox-like_sf | InterPro:IPR017930 | InterPro:Myb_dom | InterPro:SANT/Myb |
| PANTHER:PTHR10641 | PANTHER:PTHR10641:SF525 | PFAM:PF13921 | PFscan:PS51294 | ProteinID:CDX75353 | ProteinID:CDX75353.1 |
| SMART:SM00717 | SUPFAM:SSF46689 | UniParc:UPI0004EDAFFF | MapMan:15.5.2.1 | : | : |
Description
BnaA01g03490D
Coordinates
chrLK031804:-:778360..779265
Molecular Weight (calculated)
29010.7 Da
IEP (calculated)
10.102
GRAVY (calculated)
-0.982
Length
251 amino acids
Sequence
(BLAST)
(BLAST)
001: MDMSRGSNSF DNKKISCQRG HWRPIEDDHL RQLVEQYGPK NWNFIAQHLC GRSGKSCRLR WYNQLDPNIT KKPFTEEEEE RLLKAHRIQG NRWASIARLF
101: PGRTDNAVKN HFHVIMARRK RESLSSTSTS TFNQSWHNIL SPSSSLTRLN RSSQFGLWRY QKDTSRGHWP YTFVSAPRDD QFGSSSISNV RKEVYPERRK
201: LKELVDEHNN AFHTATPDQN KNSVEDGPST GDDGGEKNVT FIDFLGVGLV S
101: PGRTDNAVKN HFHVIMARRK RESLSSTSTS TFNQSWHNIL SPSSSLTRLN RSSQFGLWRY QKDTSRGHWP YTFVSAPRDD QFGSSSISNV RKEVYPERRK
201: LKELVDEHNN AFHTATPDQN KNSVEDGPST GDDGGEKNVT FIDFLGVGLV S
001: MEMSRGSNSF DNKKPSCQRG HWRPVEDDNL RQLVEQYGPK NWNFIAQHLY GRSGKSCRLR WYNQLDPNIT KKPFTEEEEE RLLKAHRIQG NRWASIARLF
101: PGRTDNAVKN HFHVIMARRK RENFSSTATS TFNQTWHTVL SPSSSLTRLN RSHFGLWRYR KDKSCGLWPY SFVSPPTNGQ FGSSSVSNVH HEIYLERRKS
201: KELVDPQNYT FHAATPDHKM TSNEDGPSMG DDGEKNDVTF IDFLGVGLAS
101: PGRTDNAVKN HFHVIMARRK RENFSSTATS TFNQTWHTVL SPSSSLTRLN RSHFGLWRYR KDKSCGLWPY SFVSPPTNGQ FGSSSVSNVH HEIYLERRKS
201: KELVDPQNYT FHAATPDHKM TSNEDGPSMG DDGEKNDVTF IDFLGVGLAS
Arabidopsis Description
ATMYB69MYB transcription factor [Source:UniProtKB/TrEMBL;Acc:Q9SZC2]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.