Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- plastid 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra004394.1-P | Field mustard | nucleus | 95.94 | 95.94 |
| CDX95921 | Canola | nucleus | 95.62 | 95.62 |
| CDY67868 | Canola | nucleus | 71.25 | 76.51 |
| CDY07345 | Canola | nucleus | 70.62 | 75.84 |
| AT1G69560.2 | Thale cress | nucleus | 70.0 | 64.74 |
| CDY50737 | Canola | nucleus | 56.25 | 52.33 |
| CDY35992 | Canola | nucleus | 25.62 | 52.23 |
| CDY21728 | Canola | nucleus | 25.0 | 50.96 |
| CDY46444 | Canola | nucleus | 55.31 | 50.14 |
| CDY44993 | Canola | nucleus | 54.38 | 49.29 |
| CDX83880 | Canola | nucleus | 25.94 | 45.6 |
| CDX96475 | Canola | nucleus | 30.62 | 42.98 |
| CDX72988 | Canola | nucleus | 30.31 | 42.92 |
| CDX82074 | Canola | nucleus | 30.31 | 41.63 |
| CDY58312 | Canola | nucleus | 30.31 | 41.45 |
| Os08t0435700-00 | Rice | nucleus | 32.5 | 40.31 |
| CDX96742 | Canola | nucleus | 29.69 | 39.26 |
| CDX81853 | Canola | nucleus | 29.38 | 38.06 |
| CDY21727 | Canola | nucleus | 29.69 | 37.85 |
| CDY71713 | Canola | nucleus | 27.19 | 37.83 |
| CDY44415 | Canola | nucleus | 30.62 | 37.55 |
| CDY30264 | Canola | nucleus | 29.38 | 36.15 |
| CDX75353 | Canola | nucleus | 28.12 | 35.86 |
| CDX68977 | Canola | nucleus | 27.81 | 35.6 |
| GSMUA_Achr5P23290_001 | Banana | nucleus | 33.44 | 35.43 |
| CDX72405 | Canola | nucleus | 26.56 | 35.27 |
| CDY28302 | Canola | nucleus | 27.5 | 35.06 |
| GSMUA_Achr6P02580_001 | Banana | nucleus | 38.12 | 34.46 |
| CDY46114 | Canola | nucleus | 25.94 | 34.44 |
| CDY67808 | Canola | nucleus | 16.88 | 33.96 |
| CDY69058 | Canola | nucleus | 27.81 | 33.71 |
| CDX85443 | Canola | nucleus | 32.19 | 33.55 |
| CDY20004 | Canola | nucleus | 30.0 | 33.45 |
| CDY16884 | Canola | nucleus | 32.5 | 33.33 |
| CDY02687 | Canola | nucleus | 32.19 | 33.23 |
| CDY38460 | Canola | nucleus | 33.44 | 33.02 |
| CDX83109 | Canola | nucleus | 16.56 | 32.72 |
| CDY66025 | Canola | nucleus | 29.38 | 32.64 |
| CDX78761 | Canola | nucleus | 31.88 | 32.59 |
| CDX70776 | Canola | nucleus | 31.88 | 32.59 |
| KRH50566 | Soybean | nucleus | 42.81 | 31.42 |
| TraesCS3B01G473600.1 | Wheat | nucleus | 33.75 | 30.51 |
| TraesCS3A01G439500.1 | Wheat | nucleus | 33.75 | 30.51 |
| VIT_01s0026g02600.t01 | Wine grape | nucleus | 43.44 | 30.42 |
| TraesCS3D01G432300.2 | Wheat | nucleus | 33.44 | 30.23 |
| Solyc05g007870.1.1 | Tomato | nucleus | 39.38 | 30.22 |
| CDY66170 | Canola | nucleus | 29.38 | 29.94 |
| PGSC0003DMT400047415 | Potato | nucleus | 39.38 | 29.37 |
| Zm00001d032194_P002 | Maize | nucleus, plastid | 35.0 | 29.32 |
| KRH70748 | Soybean | nucleus | 40.31 | 27.62 |
| KRG89586 | Soybean | nucleus | 41.88 | 27.57 |
| KRH74887 | Soybean | plastid | 40.0 | 27.53 |
| HORVU3Hr1G096010.6 | Barley | nucleus | 31.56 | 26.44 |
| CDY12830 | Canola | nucleus | 20.62 | 26.09 |
| CDX74436 | Canola | nucleus | 29.06 | 25.76 |
| CDY01420 | Canola | nucleus | 20.31 | 24.71 |
| CDY29542 | Canola | nucleus | 20.0 | 24.15 |
| GSMUA_Achr7P18390_001 | Banana | nucleus, plastid | 35.31 | 24.04 |
| CDX72621 | Canola | nucleus | 19.69 | 23.77 |
| CDY30608 | Canola | nucleus | 19.69 | 23.77 |
| CDY23023 | Canola | nucleus | 21.25 | 23.45 |
| CDY57355 | Canola | nucleus | 20.31 | 23.38 |
| CDY02098 | Canola | nucleus | 21.25 | 23.21 |
| CDX75635 | Canola | nucleus | 21.56 | 23.08 |
| CDY38933 | Canola | nucleus | 20.62 | 22.6 |
| CDX69287 | Canola | nucleus | 21.56 | 22.55 |
| CDY22442 | Canola | nucleus | 19.38 | 22.55 |
| CDX89554 | Canola | nucleus | 20.31 | 22.18 |
| CDY44045 | Canola | nucleus | 19.38 | 21.75 |
| CDY20494 | Canola | nucleus | 23.12 | 20.11 |
| CDX68566 | Canola | nucleus | 19.69 | 20.06 |
| CDX73963 | Canola | nucleus | 20.94 | 20.0 |
| CDY07907 | Canola | nucleus | 20.62 | 19.88 |
| CDX74825 | Canola | nucleus | 24.06 | 19.2 |
| CDY27271 | Canola | nucleus | 22.19 | 19.03 |
| CDX72208 | Canola | nucleus | 21.88 | 19.02 |
| CDY43567 | Canola | nucleus | 12.19 | 17.97 |
| OQU80507 | Sorghum | nucleus | 35.31 | 16.54 |
| CDY70901 | Canola | nucleus | 11.56 | 12.94 |
| CDY70773 | Canola | nucleus | 11.56 | 12.94 |
| Os08t0435725-00 | Rice | cytosol | 2.19 | 7.0 |
| CDX83108 | Canola | cytosol | 0.62 | 5.13 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.2.1 | GO:A0A078HT75 | UniProt:A0A078HT75 | EnsemblPlants:CDY40941 | ProteinID:CDY40941 |
| ProteinID:CDY40941.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0008270 |
| EnsemblPlantsGene:GSBRNA2T00072002001 | InterPro:Homeobox-like_sf | InterPro:IPR007527 | InterPro:IPR017930 | InterPro:Myb_dom | PFAM:PF00249 |
| PFscan:PS50966 | PFscan:PS51294 | PANTHER:PTHR10641 | PANTHER:PTHR10641:SF473 | InterPro:SANT/Myb | SMART:SM00717 |
| SUPFAM:SSF46689 | UniParc:UPI0004EEC74E | InterPro:Znf_SWIM | : | : | : |
Description
BnaC06g30790DBnaC06g30790D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HT75]
Coordinates
chrLK032484:+:295130..296281
Molecular Weight (calculated)
37103.8 Da
IEP (calculated)
9.011
GRAVY (calculated)
-0.877
Length
320 amino acids
Sequence
(BLAST)
(BLAST)
001: MGMEIAYTNV SFPSITPHFP SSSHPLTNNN NIFMSKDHHR RMDQIAYFSL NVNNDQHKGH YYHASHGEEE MKNPNRCNCS TSSKKERRDG GSCRHSLKAS
101: VSRGHWRPAE DAKLKELVAV YGPQNWNLIA EKLQGRSGKS CRLRWFNQLD PRINRRAFTE EEEERLMQAH NLYGNKWAMI ARLFPGRTDN SVKNHWHVVM
201: ARKFREQSSV YPRRKTMITH KPLVNPNAHS CNDFEPTRSD LIHLVGNDQS HLMLPIPCFT GYDHGMFENQ MMIDDYSTRT REVATTFGDS NQTGKCEMLD
301: ESMNEKKKPH FFDFLGLGTV
101: VSRGHWRPAE DAKLKELVAV YGPQNWNLIA EKLQGRSGKS CRLRWFNQLD PRINRRAFTE EEEERLMQAH NLYGNKWAMI ARLFPGRTDN SVKNHWHVVM
201: ARKFREQSSV YPRRKTMITH KPLVNPNAHS CNDFEPTRSD LIHLVGNDQS HLMLPIPCFT GYDHGMFENQ MMIDDYSTRT REVATTFGDS NQTGKCEMLD
301: ESMNEKKKPH FFDFLGLGTV
001: MMFKVIFNIC SSPPMRMEMV HADVASLSIT PCFPSSLSSS SHHHYNQQQH CIMSEDQHHS MDQTTSSDYF SLNIDNAQHL RSYYTSHREE DMNPNLSDYS
101: NCNKKDTTVY RSCGHSSKAS VSRGHWRPAE DTKLKELVAV YGPQNWNLIA EKLQGRSGKS CRLRWFNQLD PRINRRAFTE EEEERLMQAH RLYGNKWAMI
201: ARLFPGRTDN SVKNHWHVIM ARKFREQSSS YRRRKTMVSL KPLINPNPHI FNDFDPTRLA LTHLASSDHK QLMLPVPCFP GYDHENESPL MVDMFETQMM
301: VGDYIAWTQE ATTFDFLNQT GKSEIFERIN EEKKPPFFDF LGLGTV
101: NCNKKDTTVY RSCGHSSKAS VSRGHWRPAE DTKLKELVAV YGPQNWNLIA EKLQGRSGKS CRLRWFNQLD PRINRRAFTE EEEERLMQAH RLYGNKWAMI
201: ARLFPGRTDN SVKNHWHVIM ARKFREQSSS YRRRKTMVSL KPLINPNPHI FNDFDPTRLA LTHLASSDHK QLMLPVPCFP GYDHENESPL MVDMFETQMM
301: VGDYIAWTQE ATTFDFLNQT GKSEIFERIN EEKKPPFFDF LGLGTV
Arabidopsis Description
MYB105myb domain protein 105 [Source:TAIR;Acc:AT1G69560]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.