CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

plastid 3
mitochondrion 2
nucleus 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d032194_P002	Maize	nucleus, plastid	48.9	87.43
Os08t0435700-00	Rice	nucleus	29.72	78.68
TraesCS3A01G439500.1	Wheat	nucleus	35.72	68.93
TraesCS3D01G432300.2	Wheat	nucleus	35.58	68.64
TraesCS3B01G473600.1	Wheat	nucleus	35.29	68.08
HORVU3Hr1G096010.6	Barley	nucleus	33.09	59.16
EES02759	Sorghum	nucleus	18.74	45.39
EER93554	Sorghum	nucleus	15.67	44.77
EES02758	Sorghum	nucleus	19.03	42.9
GSMUA_Achr11P...	Banana	nucleus	16.84	41.82
Os08t0435725-00	Rice	cytosol	6.0	41.0
EES09660	Sorghum	nucleus	15.81	39.13
CDY67868	Canola	nucleus	16.98	38.93
Bra003995.1-P	Field mustard	nucleus	16.84	38.72
CDY07345	Canola	nucleus	16.84	38.59
EES15780	Sorghum	nucleus	13.32	36.11
EES02760	Sorghum	nucleus	13.91	35.58
CDY40941	Canola	nucleus	16.54	35.31
VIT_14s0108g01010.t01	Wine grape	nucleus	24.6	35.29
CDY50737	Canola	nucleus	17.72	35.17
CDX95921	Canola	nucleus	16.4	35.0
Bra004394.1-P	Field mustard	nucleus	16.4	35.0
CDY46444	Canola	nucleus	17.86	34.56
Bra016285.1-P	Field mustard	nucleus	17.86	34.56
CDY44993	Canola	nucleus	17.86	34.56
AT1G26780.2	Thale cress	nucleus	18.16	34.54
AT1G69560.2	Thale cress	nucleus	17.42	34.39
Solyc05g007870.1.1	Tomato	nucleus	20.94	34.29
PGSC0003DMT400047415	Potato	nucleus	21.38	34.03
VIT_01s0026g02600.t01	Wine grape	nucleus	22.55	33.7
KRH50566	Soybean	nucleus	20.94	32.8
KRG89586	Soybean	nucleus	21.82	30.66
KRH74887	Soybean	plastid	20.79	30.54
KRH70748	Soybean	nucleus	20.35	29.76
OQU75658	Sorghum	nucleus	9.96	23.86
EES13945	Sorghum	nucleus	7.76	23.56
EER90085	Sorghum	nucleus	10.1	22.04
EES04668	Sorghum	nucleus	10.25	21.41
EER98550	Sorghum	nucleus	11.13	20.77
OQU87862	Sorghum	nucleus	11.13	19.05
EES18041	Sorghum	nucleus	9.66	18.49

Protein Annotations

EnsemblPlants:OQU80507	EnsemblPlantsGene:SORBI_3007G137101	Gene3D:1.10.10.60	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0005488	InterPro:Homeobox-like_sf	InterPro:IPR017930	InterPro:Myb_dom	InterPro:SANT/Myb	PANTHER:PTHR10641
PANTHER:PTHR10641:SF697	PFAM:PF13921	PFscan:PS51294	ProteinID:OQU80507	ProteinID:OQU80507.1	SEG:seg
SMART:SM00717	SUPFAM:SSF46689	UniParc:UPI000B8BA860	UniProt:A0A1Z5R9W1	MapMan:15.5.2.1	:

Description

hypothetical protein

Coordinates

chr7:-:56463393..56469232

Molecular Weight (calculated)

70545.4 Da

IEP (calculated)

10.132

GRAVY (calculated)

-0.289

Length

683 amino acids

Sequence
(BLAST)

001: MSKARANVAG VGRVDEAVRA CVRACVRARL ARGQSGSGTV RAGLPPVQLK RKVPVVAAVR ACMFMSCHQG SPAIDPSSGN AMQAAGLFIV GTLLFTAHSH
101: STHAPPCYRP RLPSPAPVPG GLPCPATAIP DPDPEQPPPP ARINGCRRPA SQPRPPPQTI PSPFPPPQQQ EQQLAYPTVK STRAPPGPPS SPAVRACGAA
201: ERSIHLTGGC VRCLPACLPP SLPVALASSS SSSLQPAVRV SAAAEEERAV RACPPAPTRT PSSSPQLISR APRPPTRTGT STMPCSSAAP TWLLRVASAA
301: DQASSSSSSK GGGRVLTAGT TGTTMDTAAT AAAAGCGGNG GGGGGSNAAD LQESSSSGQS RLAARGHWRP AEDAKLRELV ALYGPQNWNL IAEKLDGRSG
401: KSCRLRWFNQ LDPRISKRPF SDEEEERLMA AHRFYGNKWA MIARLFPGRT DNAVKNHWHV IMARKYREQS TAYRRRKLNQ AVQRKLEASA AAVATMPPAA
501: GSTGDVVGAA LGHHHHQLLA AAAAAAHDAA YGFAAADPYG AFGFRQYYPF PPASAEDTPP PPPPPFCLFP GPSSAAALHA DSRRLPWPSS SSSDAAAAAA
601: GGGRYGEPQQ QLLLPVVHGG SWIDGVGVAV AGGHHEAQFV LGNNGGAFEG TTRQQGAAAG AHFEAAAAAP PPAFIDFLGV GAT

Best Arabidopsis Sequence Match ( AT1G69560.1 )
(BLAST)

001: MEMVHADVAS LSITPCFPSS LSSSSHHHYN QQQHCIMSED QHHSMDQTTS SDYFSLNIDN AQHLRSYYTS HREEDMNPNL SDYSNCNKKD TTVYRSCGHS
101: SKASVSRGHW RPAEDTKLKE LVAVYGPQNW NLIAEKLQGR SGKSCRLRWF NQLDPRINRR AFTEEEEERL MQAHRLYGNK WAMIARLFPG RTDNSVKNHW
201: HVIMARKFRE QSSSYRRRKT MVSLKPLINP NPHIFNDFDP TRLALTHLAS SDHKQLMLPV PCFPGYDHEN ESPLMVDMFE TQMMVGDYIA WTQEATTFDF
301: LNQTGKSEIF ERINEEKKPP FFDFLGLGTV

Arabidopsis Description

MYB105myb domain protein 105 [Source:TAIR;Acc:AT1G69560]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.