Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY21728 | Canola | nucleus | 94.9 | 94.9 |
| CDX83880 | Canola | nucleus | 85.35 | 73.63 |
| CDY21727 | Canola | nucleus | 99.36 | 62.15 |
| CDX81853 | Canola | nucleus | 91.72 | 58.3 |
| Bra016575.1-P | Field mustard | nucleus | 86.62 | 56.2 |
| CDX96742 | Canola | nucleus | 86.62 | 56.2 |
| AT1G17950.1 | Thale cress | nucleus | 86.62 | 54.62 |
| CDY58312 | Canola | nucleus | 73.25 | 49.15 |
| CDX96475 | Canola | nucleus | 71.34 | 49.12 |
| CDX82074 | Canola | nucleus | 72.61 | 48.93 |
| CDX72988 | Canola | nucleus | 70.06 | 48.67 |
| GSMUA_Achr9P29090_001 | Banana | nucleus | 61.15 | 45.71 |
| VIT_17s0000g01890.t01 | Wine grape | nucleus | 64.33 | 45.7 |
| EER93554 | Sorghum | nucleus | 63.06 | 41.42 |
| KRH09502 | Soybean | nucleus | 61.15 | 41.03 |
| PGSC0003DMT400079714 | Potato | nucleus | 63.69 | 40.98 |
| HORVU4Hr1G008640.1 | Barley | nucleus | 63.06 | 40.74 |
| KRH38975 | Soybean | nucleus | 61.15 | 40.51 |
| Os03t0720800-01 | Rice | nucleus | 61.78 | 39.59 |
| Zm00001d013399_P001 | Maize | nucleus | 60.51 | 39.58 |
| TraesCS4B01G052400.2 | Wheat | nucleus | 62.42 | 39.36 |
| TraesCS4D01G052600.1 | Wheat | nucleus | 62.42 | 39.2 |
| Zm00001d033815_P001 | Maize | nucleus | 61.78 | 39.11 |
| CDY71713 | Canola | nucleus | 52.87 | 36.09 |
| TraesCS4A01G262500.3 | Wheat | nucleus | 61.78 | 35.14 |
| CDX68977 | Canola | nucleus | 54.14 | 34.0 |
| CDX75353 | Canola | nucleus | 54.14 | 33.86 |
| CDY28302 | Canola | nucleus | 53.5 | 33.47 |
| CDY67808 | Canola | nucleus | 33.12 | 32.7 |
| CDY69058 | Canola | nucleus | 52.87 | 31.44 |
| CDX83109 | Canola | nucleus | 31.21 | 30.25 |
| CDY46114 | Canola | nucleus | 45.22 | 29.46 |
| CDX72405 | Canola | nucleus | 44.59 | 29.05 |
| CDX85443 | Canola | nucleus | 56.05 | 28.66 |
| CDY30264 | Canola | nucleus | 47.13 | 28.46 |
| CDY44415 | Canola | nucleus | 47.13 | 28.35 |
| CDY02687 | Canola | nucleus | 55.41 | 28.06 |
| CDY67868 | Canola | nucleus | 52.23 | 27.52 |
| CDY16884 | Canola | nucleus | 54.14 | 27.24 |
| CDY07345 | Canola | nucleus | 50.96 | 26.85 |
| CDX78761 | Canola | nucleus | 53.5 | 26.84 |
| CDX70776 | Canola | nucleus | 53.5 | 26.84 |
| CDY38460 | Canola | nucleus | 54.14 | 26.23 |
| CDY20004 | Canola | nucleus | 47.13 | 25.78 |
| CDY66025 | Canola | nucleus | 47.13 | 25.69 |
| CDX95921 | Canola | nucleus | 52.23 | 25.62 |
| CDY40941 | Canola | nucleus | 52.23 | 25.62 |
| CDY50737 | Canola | nucleus | 54.14 | 24.71 |
| CDY44993 | Canola | nucleus | 53.5 | 23.8 |
| CDY46444 | Canola | nucleus | 53.5 | 23.8 |
| CDY66170 | Canola | nucleus | 46.5 | 23.25 |
| CDY12830 | Canola | nucleus | 33.76 | 20.95 |
| CDX74436 | Canola | nucleus | 47.77 | 20.78 |
| CDY01420 | Canola | nucleus | 33.76 | 20.15 |
| CDY22442 | Canola | nucleus | 34.39 | 19.64 |
| CDY30608 | Canola | nucleus | 33.12 | 19.62 |
| CDX72621 | Canola | nucleus | 32.48 | 19.25 |
| CDY29542 | Canola | nucleus | 31.85 | 18.87 |
| CDY38933 | Canola | nucleus | 35.03 | 18.84 |
| CDX89554 | Canola | nucleus | 35.03 | 18.77 |
| CDY44045 | Canola | nucleus | 33.76 | 18.6 |
| CDX75635 | Canola | nucleus | 35.03 | 18.39 |
| CDY57355 | Canola | nucleus | 32.48 | 18.35 |
| CDY23023 | Canola | nucleus | 33.76 | 18.28 |
| CDY02098 | Canola | nucleus | 33.76 | 18.09 |
| CDX69287 | Canola | nucleus | 34.39 | 17.65 |
| CDX73963 | Canola | nucleus | 36.94 | 17.31 |
| CDY07907 | Canola | nucleus | 36.31 | 17.17 |
| CDX68566 | Canola | nucleus | 31.85 | 15.92 |
| CDY20494 | Canola | nucleus | 35.67 | 15.22 |
| CDX72208 | Canola | nucleus | 35.67 | 15.22 |
| CDY27271 | Canola | nucleus | 35.67 | 15.01 |
| CDY43567 | Canola | nucleus | 19.75 | 14.29 |
| CDX74825 | Canola | nucleus | 36.31 | 14.21 |
| CDY70901 | Canola | nucleus | 17.2 | 9.44 |
| CDY70773 | Canola | nucleus | 17.2 | 9.44 |
| CDX83108 | Canola | cytosol | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:CDY35992 | EnsemblPlantsGene:GSBRNA2T00059552001 | Gene3D:1.10.10.60 | GO:A0A078HDV6 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0005488 | InterPro:Homeobox-like_sf | InterPro:IPR017930 | InterPro:Myb_dom | InterPro:SANT/Myb |
| PANTHER:PTHR10641 | PANTHER:PTHR10641:SF665 | PFAM:PF00249 | PFscan:PS51294 | ProteinID:CDY35992 | ProteinID:CDY35992.1 |
| SMART:SM00717 | SUPFAM:SSF46689 | UniParc:UPI0004EF3FD9 | UniProt:A0A078HDV6 | MapMan:15.5.2.1 | : |
Description
BnaA05g29580DBnaA05g29580D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HDV6]
Coordinates
chrLK032364:-:318666..319754
Molecular Weight (calculated)
18208.8 Da
IEP (calculated)
11.315
GRAVY (calculated)
-0.826
Length
157 amino acids
Sequence
(BLAST)
(BLAST)
001: MCSRGHWRPA EDEKLKELVQ QFGPHNWNAI AQKLTGRSGK SCRLRWFNQL DPRINRTPFT EEEEKRLLAS HRIHGNRWSV IARFFPGRTD NAVKNHWHVI
101: MARRGRELSK LRPRGLGHDG TTAATIGYDG CDKKRRLATA STISYPHQFS HISLCLR
101: MARRGRELSK LRPRGLGHDG TTAATIGYDG CDKKRRLATA STISYPHQFS HISLCLR
001: MMCSRGHWRP AEDEKLRELV EQFGPHNWNA IAQKLSGRSG KSCRLRWFNQ LDPRINRNPF TEEEEERLLA SHRIHGNRWS VIARFFPGRT DNAVKNHWHV
101: IMARRGRERS KLRPRGLGHD GTVAATGMIG NYKDCDKERR LATTTAINFP YQFSHINHFQ VLKEFLTGKI GFRNSTTPIQ EGAIDQTKRP MEFYNFLQVN
201: TDSKIHELID NSRKDEEEDV DQNNRIPNEN CVPFFDFLSV GNSASQGLC
101: IMARRGRERS KLRPRGLGHD GTVAATGMIG NYKDCDKERR LATTTAINFP YQFSHINHFQ VLKEFLTGKI GFRNSTTPIQ EGAIDQTKRP MEFYNFLQVN
201: TDSKIHELID NSRKDEEEDV DQNNRIPNEN CVPFFDFLSV GNSASQGLC
Arabidopsis Description
MYB52Transcription factor MYB52 [Source:UniProtKB/Swiss-Prot;Acc:Q6R0C4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.