Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra025652.1-P | Field mustard | nucleus | 71.19 | 99.23 |
| CDY30264 | Canola | nucleus | 69.25 | 96.15 |
| CDY67808 | Canola | nucleus | 26.59 | 60.38 |
| CDY44415 | Canola | nucleus | 37.12 | 51.34 |
| CDY35992 | Canola | nucleus | 20.78 | 47.77 |
| CDY20004 | Canola | nucleus | 37.67 | 47.39 |
| CDY66025 | Canola | nucleus | 37.12 | 46.53 |
| CDY21728 | Canola | nucleus | 20.22 | 46.5 |
| CDY66170 | Canola | nucleus | 37.4 | 42.99 |
| CDX83880 | Canola | nucleus | 21.05 | 41.76 |
| AT5G39700.1 | Thale cress | nucleus | 21.61 | 41.05 |
| CDX72988 | Canola | nucleus | 24.1 | 38.5 |
| CDX96475 | Canola | nucleus | 24.1 | 38.16 |
| CDX82074 | Canola | nucleus | 24.1 | 37.34 |
| CDY58312 | Canola | nucleus | 24.1 | 37.18 |
| GSMUA_Achr5P27750_001 | Banana | nucleus | 25.48 | 36.51 |
| CDX96742 | Canola | nucleus | 24.1 | 35.95 |
| CDX81853 | Canola | nucleus | 24.1 | 35.22 |
| Os01t0274800-01 | Rice | nucleus | 25.76 | 35.09 |
| CDY21727 | Canola | nucleus | 24.38 | 35.06 |
| CDY71713 | Canola | nucleus | 22.16 | 34.78 |
| GSMUA_Achr6P15900_001 | Banana | nucleus | 26.04 | 34.18 |
| CDX68977 | Canola | nucleus | 22.71 | 32.8 |
| CDY28302 | Canola | nucleus | 22.71 | 32.67 |
| CDX75353 | Canola | nucleus | 22.71 | 32.67 |
| GSMUA_Achr10P... | Banana | nucleus | 27.15 | 32.24 |
| GSMUA_Achr9P04990_001 | Banana | nucleus | 26.32 | 31.46 |
| CDX72405 | Canola | nucleus | 20.78 | 31.12 |
| CDY02687 | Canola | nucleus | 26.59 | 30.97 |
| CDX85443 | Canola | nucleus | 26.32 | 30.94 |
| CDY07345 | Canola | nucleus | 25.48 | 30.87 |
| EES02760 | Sorghum | nucleus | 22.71 | 30.71 |
| CDY46114 | Canola | nucleus | 20.5 | 30.71 |
| CDY67868 | Canola | nucleus | 25.21 | 30.54 |
| TraesCS3B01G217100.1 | Wheat | nucleus | 26.32 | 30.35 |
| CDY69058 | Canola | nucleus | 22.16 | 30.3 |
| CDX83109 | Canola | nucleus | 13.57 | 30.25 |
| CDY16884 | Canola | nucleus | 25.76 | 29.81 |
| GSMUA_Achr9P17000_001 | Banana | nucleus | 24.93 | 29.61 |
| TraesCS3D01G191400.1 | Wheat | nucleus | 26.32 | 29.59 |
| TraesCS3A01G187800.1 | Wheat | nucleus | 26.59 | 29.54 |
| CDX78761 | Canola | nucleus | 25.48 | 29.39 |
| CDX70776 | Canola | nucleus | 25.21 | 29.07 |
| CDX95921 | Canola | nucleus | 25.76 | 29.06 |
| CDY40941 | Canola | nucleus | 25.76 | 29.06 |
| CDY38460 | Canola | nucleus | 26.04 | 29.01 |
| HORVU3Hr1G038700.2 | Barley | nucleus | 26.32 | 28.79 |
| GSMUA_Achr10P... | Banana | nucleus | 25.48 | 28.66 |
| Zm00001d040428_P001 | Maize | nucleus | 22.16 | 28.27 |
| GSMUA_Achr3P09490_001 | Banana | nucleus | 24.93 | 28.21 |
| CDY50737 | Canola | nucleus | 25.76 | 27.03 |
| GSMUA_Achr6P32250_001 | Banana | nucleus | 25.76 | 26.88 |
| CDY44993 | Canola | nucleus | 26.04 | 26.63 |
| CDY46444 | Canola | nucleus | 25.76 | 26.35 |
| GSMUA_Achr11P... | Banana | endoplasmic reticulum, golgi | 28.25 | 25.89 |
| CDY12830 | Canola | nucleus | 16.9 | 24.11 |
| CDY01420 | Canola | nucleus | 16.9 | 23.19 |
| CDX72621 | Canola | nucleus | 16.07 | 21.89 |
| CDY22442 | Canola | nucleus | 16.62 | 21.82 |
| CDY30608 | Canola | nucleus | 15.79 | 21.51 |
| CDY44045 | Canola | nucleus | 16.9 | 21.4 |
| CDY57355 | Canola | nucleus | 16.34 | 21.22 |
| CDY29542 | Canola | nucleus | 15.51 | 21.13 |
| CDY23023 | Canola | nucleus | 16.9 | 21.03 |
| CDY38933 | Canola | nucleus | 16.9 | 20.89 |
| CDY02098 | Canola | nucleus | 16.9 | 20.82 |
| CDX89554 | Canola | nucleus | 16.9 | 20.82 |
| CDX75635 | Canola | nucleus | 16.9 | 20.4 |
| CDX69287 | Canola | nucleus | 16.9 | 19.93 |
| CDX73963 | Canola | nucleus | 18.28 | 19.7 |
| CDY07907 | Canola | nucleus | 18.01 | 19.58 |
| CDY27271 | Canola | nucleus | 18.28 | 17.69 |
| CDX72208 | Canola | nucleus | 18.01 | 17.66 |
| CDX68566 | Canola | nucleus | 15.24 | 17.52 |
| CDY20494 | Canola | nucleus | 17.45 | 17.12 |
| CDX74825 | Canola | nucleus | 18.01 | 16.21 |
| CDY43567 | Canola | nucleus | 9.7 | 16.13 |
| CDY70773 | Canola | nucleus | 9.7 | 12.24 |
| CDY70901 | Canola | nucleus | 9.7 | 12.24 |
| CDX83108 | Canola | cytosol | 0.55 | 5.13 |
Protein Annotations
| EnsemblPlants:CDX74436 | EnsemblPlantsGene:GSBRNA2T00114295001 | Gene3D:1.10.10.60 | GO:A0A078CBG9 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0005488 | InterPro:Homeobox-like_sf | InterPro:IPR017930 | InterPro:Myb_dom | InterPro:SANT/Myb |
| PANTHER:PTHR10641 | PANTHER:PTHR10641:SF473 | PFAM:PF00249 | PFscan:PS51294 | ProteinID:CDX74436 | ProteinID:CDX74436.1 |
| SEG:seg | SMART:SM00717 | SUPFAM:SSF46689 | UniParc:UPI0004EDECF3 | MapMan:15.5.2.1 | : |
Description
BnaA04g09530D
Coordinates
chrLK031801:+:273827..275837
Molecular Weight (calculated)
41813.2 Da
IEP (calculated)
10.638
GRAVY (calculated)
-0.716
Length
361 amino acids
Sequence
(BLAST)
(BLAST)
001: MMHQENKKKQ LSKVCTRGHW KPSEDFKLKE LVGVFGPKKW NHIARKMQGR TGKSCRLRWF NQLDPRIIKS AFSEEEEEKL LAVHRTFGNK WSLIAKLFPG
101: RTDNAVKNHW HILMARKLRK QSISYSKSRK RQTPSPDEIA PLNLLPSFNL FPGKSCRLRW FNQLDPRIIK SAFSEEEEEK LLAVHRTFGN KWSLIAKLFP
201: GRTDNAVKNH WHILMARKLR KQSISYSKSR KRQTPSPDEI TPLNLLPSFN LFPGFVGDES TEFNNYSWKM PKEESANLRD QFLLEEYCSM RMSMQYLGHH
301: HHHQHGFSTF PADSVELLTR YLSNSQPSSS PPTSALSTSG AENTMTTTPP RFIDFLGVGA S
101: RTDNAVKNHW HILMARKLRK QSISYSKSRK RQTPSPDEIA PLNLLPSFNL FPGKSCRLRW FNQLDPRIIK SAFSEEEEEK LLAVHRTFGN KWSLIAKLFP
201: GRTDNAVKNH WHILMARKLR KQSISYSKSR KRQTPSPDEI TPLNLLPSFN LFPGFVGDES TEFNNYSWKM PKEESANLRD QFLLEEYCSM RMSMQYLGHH
301: HHHQHGFSTF PADSVELLTR YLSNSQPSSS PPTSALSTSG AENTMTTTPP RFIDFLGVGA S
001: MEMVHADVAS LSITPCFPSS LSSSSHHHYN QQQHCIMSED QHHSMDQTTS SDYFSLNIDN AQHLRSYYTS HREEDMNPNL SDYSNCNKKD TTVYRSCGHS
101: SKASVSRGHW RPAEDTKLKE LVAVYGPQNW NLIAEKLQGR SGKSCRLRWF NQLDPRINRR AFTEEEEERL MQAHRLYGNK WAMIARLFPG RTDNSVKNHW
201: HVIMARKFRE QSSSYRRRKT MVSLKPLINP NPHIFNDFDP TRLALTHLAS SDHKQLMLPV PCFPGYDHEN ESPLMVDMFE TQMMVGDYIA WTQEATTFDF
301: LNQTGKSEIF ERINEEKKPP FFDFLGLGTV
101: SKASVSRGHW RPAEDTKLKE LVAVYGPQNW NLIAEKLQGR SGKSCRLRWF NQLDPRINRR AFTEEEEERL MQAHRLYGNK WAMIARLFPG RTDNSVKNHW
201: HVIMARKFRE QSSSYRRRKT MVSLKPLINP NPHIFNDFDP TRLALTHLAS SDHKQLMLPV PCFPGYDHEN ESPLMVDMFE TQMMVGDYIA WTQEATTFDF
301: LNQTGKSEIF ERINEEKKPP FFDFLGLGTV
Arabidopsis Description
MYB105myb domain protein 105 [Source:TAIR;Acc:AT1G69560]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.