Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 1
- nucleus 3
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY67808 | Canola | nucleus | 28.42 | 33.96 |
| Os01t0274800-01 | Rice | nucleus | 42.11 | 30.19 |
| Bra025652.1-P | Field mustard | nucleus | 41.05 | 30.12 |
| CDY30264 | Canola | nucleus | 40.53 | 29.62 |
| GSMUA_Achr5P27750_001 | Banana | nucleus | 36.84 | 27.78 |
| AT1G73410.1 | Thale cress | nucleus | 35.26 | 27.57 |
| AT3G29020.2 | Thale cress | nucleus | 42.63 | 26.56 |
| GSMUA_Achr6P15900_001 | Banana | nucleus | 38.42 | 26.55 |
| AT1G17950.1 | Thale cress | nucleus | 34.74 | 26.51 |
| GSMUA_Achr9P04990_001 | Banana | nucleus | 41.58 | 26.16 |
| GSMUA_Achr10P... | Banana | nucleus | 41.05 | 25.66 |
| AT4G33450.1 | Thale cress | nucleus | 33.68 | 25.6 |
| GSMUA_Achr10P... | Banana | nucleus | 42.11 | 24.92 |
| EES02760 | Sorghum | nucleus | 34.74 | 24.72 |
| GSMUA_Achr9P17000_001 | Banana | nucleus | 39.47 | 24.67 |
| AT5G17800.1 | Thale cress | nucleus | 41.58 | 24.46 |
| Zm00001d040428_P001 | Maize | nucleus | 35.79 | 24.03 |
| TraesCS3B01G217100.1 | Wheat | nucleus | 38.95 | 23.64 |
| AT1G69560.2 | Thale cress | nucleus | 42.63 | 23.41 |
| TraesCS3A01G187800.1 | Wheat | nucleus | 39.47 | 23.08 |
| TraesCS3D01G191400.1 | Wheat | nucleus | 38.95 | 23.05 |
| HORVU3Hr1G038700.2 | Barley | nucleus | 40.0 | 23.03 |
| GSMUA_Achr3P09490_001 | Banana | nucleus | 37.89 | 22.57 |
| GSMUA_Achr6P32250_001 | Banana | nucleus | 39.47 | 21.68 |
| CDX74436 | Canola | nucleus | 41.05 | 21.61 |
| AT1G26780.2 | Thale cress | nucleus | 40.0 | 21.17 |
| GSMUA_Achr11P... | Banana | endoplasmic reticulum, golgi | 40.0 | 19.29 |
| AT5G67300.1 | Thale cress | nucleus | 27.37 | 17.05 |
| AT3G50060.1 | Thale cress | nucleus | 26.84 | 16.94 |
| AT2G23290.1 | Thale cress | nucleus | 26.84 | 16.5 |
| AT4G37260.1 | Thale cress | nucleus | 26.84 | 15.94 |
| AT2G39880.1 | Thale cress | nucleus | 27.89 | 14.44 |
| AT3G09230.1 | Thale cress | nucleus | 27.89 | 13.49 |
| AT3G55730.1 | Thale cress | nucleus | 27.37 | 13.03 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.2.1 | EntrezGene:833966 | UniProt:A0A178UAD5 | ProteinID:AED94465.1 | EMBL:AF175995 |
| ArrayExpress:AT5G39700 | EnsemblPlantsGene:AT5G39700 | RefSeq:AT5G39700 | TAIR:AT5G39700 | RefSeq:AT5G39700-TAIR-G | EnsemblPlants:AT5G39700.1 |
| TAIR:AT5G39700.1 | Unigene:At.7527 | ProteinID:BAB08902.1 | GO:GO:0000981 | GO:GO:0001135 | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0006357 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0030154 | GO:GO:0043565 | GO:GO:0044212 |
| InterPro:Homeobox-like_sf | InterPro:IPR017930 | Symbol:MYB89 | InterPro:Myb_dom | RefSeq:NP_568569.1 | ProteinID:OAO90918.1 |
| PFAM:PF00249 | PO:PO:0009005 | PFscan:PS51294 | PANTHER:PTHR10641 | PANTHER:PTHR10641:SF473 | UniProt:Q9SPG4 |
| InterPro:SANT/Myb | SMART:SM00717 | SUPFAM:SSF46689 | UniParc:UPI00000A5482 | : | : |
Description
MYB89Myb domain protein 89 [Source:UniProtKB/TrEMBL;Acc:Q9SPG4]
Coordinates
chr5:-:15893761..15894424
Molecular Weight (calculated)
22677.3 Da
IEP (calculated)
10.299
GRAVY (calculated)
-0.829
Length
190 amino acids
Sequence
(BLAST)
(BLAST)
001: MYLFMYKCNI VLEETHVFQN TPCDVSLQRP FNGFGENNAL PLRKMHQEEK KKKHRGGHWT LSEDLKLKEL VAVFGPQNWK FIGEKMEPRT SLSCRQRWFN
101: QLDPKINKRN FTDEEEEKLL RAHILYGNKW SKIAKLFNRR TDHAVKNHWH SLMNRIIRKQ SASDIRSFDN IQNYQTSNFL PGLCLLNTKQ
101: QLDPKINKRN FTDEEEEKLL RAHILYGNKW SKIAKLFNRR TDHAVKNHWH SLMNRIIRKQ SASDIRSFDN IQNYQTSNFL PGLCLLNTKQ
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.