Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY20494 | Canola | nucleus | 43.05 | 42.93 |
| Bra005006.1-P | Field mustard | nucleus | 43.05 | 39.7 |
| CDX74825 | Canola | nucleus | 43.32 | 39.65 |
| AT3G55730.1 | Thale cress | nucleus | 43.05 | 39.6 |
| GSMUA_Achr9P03720_001 | Banana | nucleus | 31.61 | 36.02 |
| GSMUA_Achr6P33470_001 | Banana | nucleus | 21.8 | 35.56 |
| PGSC0003DMT400069921 | Potato | nucleus | 34.6 | 33.96 |
| Solyc05g052850.2.1 | Tomato | nucleus | 33.79 | 33.16 |
| AT5G67300.1 | Thale cress | nucleus | 27.25 | 32.79 |
| VIT_13s0019g03200.t01 | Wine grape | nucleus | 33.52 | 32.54 |
| AT3G50060.1 | Thale cress | nucleus | 26.16 | 31.89 |
| KRH15016 | Soybean | nucleus | 33.52 | 31.3 |
| KRH73115 | Soybean | nucleus | 32.97 | 30.33 |
| AT2G23290.1 | Thale cress | nucleus | 25.34 | 30.1 |
| AT4G37260.1 | Thale cress | nucleus | 25.34 | 29.06 |
| AT3G09230.1 | Thale cress | nucleus | 30.25 | 28.24 |
| AT5G39700.1 | Thale cress | nucleus | 14.44 | 27.89 |
| OQU87862 | Sorghum | nucleus | 29.43 | 27.07 |
| Zm00001d012379_P001 | Maize | nucleus | 29.43 | 26.93 |
| AT1G73410.1 | Thale cress | nucleus | 17.71 | 26.75 |
| Os01t0850400-01 | Rice | nucleus | 29.16 | 25.91 |
| TraesCS3A01G365200.1 | Wheat | nucleus | 31.88 | 25.32 |
| AT1G17950.1 | Thale cress | nucleus | 17.17 | 25.3 |
| AT4G33450.1 | Thale cress | nucleus | 17.17 | 25.2 |
| TraesCS3B01G397100.1 | Wheat | nucleus | 31.88 | 25.0 |
| TraesCS3D01G358400.1 | Wheat | nucleus | 31.88 | 24.95 |
| HORVU3Hr1G085570.1 | Barley | plastid | 31.34 | 24.95 |
| GSMUA_Achr5P28780_001 | Banana | nucleus | 26.7 | 24.69 |
| AT5G17800.1 | Thale cress | nucleus | 19.35 | 21.98 |
| AT3G29020.2 | Thale cress | nucleus | 17.98 | 21.64 |
| AT1G69560.2 | Thale cress | nucleus | 19.62 | 20.81 |
| AT1G26780.2 | Thale cress | nucleus | 18.26 | 18.66 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.2.1 | EntrezGene:818575 | ProteinID:AAB95273.1 | ProteinID:AAM14852.1 | EMBL:AB493582 |
| ProteinID:AEC09744.1 | EMBL:AF175988 | ArrayExpress:AT2G39880 | EnsemblPlantsGene:AT2G39880 | RefSeq:AT2G39880 | TAIR:AT2G39880 |
| RefSeq:AT2G39880-TAIR-G | EnsemblPlants:AT2G39880.1 | TAIR:AT2G39880.1 | GO:GO:0000981 | GO:GO:0001135 | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0006357 |
| GO:GO:0007275 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009555 | GO:GO:0009987 |
| GO:GO:0016020 | GO:GO:0016021 | GO:GO:0030154 | GO:GO:0043565 | GO:GO:0044212 | InterPro:Homeobox-like_sf |
| InterPro:IPR017930 | Symbol:MYB25 | InterPro:Myb_dom | RefSeq:NP_181517.1 | UniProt:O04192 | PFAM:PF00249 |
| PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 |
| PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007098 | PO:PO:0007115 |
| PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 |
| PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 |
| PO:PO:0009046 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020094 | PO:PO:0020100 |
| PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 | PFscan:PS51294 | PANTHER:PTHR10641 | PANTHER:PTHR10641:SF524 |
| InterPro:SANT/Myb | SMART:SM00717 | SUPFAM:SSF46689 | UniParc:UPI00000A34F9 | SEG:seg | : |
Description
MYB25Transcription factor MYB25 [Source:UniProtKB/Swiss-Prot;Acc:O04192]
Coordinates
chr2:-:16647711..16649527
Molecular Weight (calculated)
40914.5 Da
IEP (calculated)
7.913
GRAVY (calculated)
-0.661
Length
367 amino acids
Sequence
(BLAST)
(BLAST)
001: MNGEISRPPE LISSRNPCKS FENAIHKAVE AELAELAKSD ANGGGKSKVK GPWLPEQDEA LTRLVKMCGP RNWNLISRGI PGRSGKSCRL RWCNQLDPIL
101: KRKPFSDEEE HMIMSAQAVL GNKWSVIAKL LPGRTDNAIK NHWNSNLRRK PAEQWKIPLL MSNTEIVYQL YPSMVRRISN ASPKEHLPQE EETGVLSDDK
201: MDDEAKEPPR EQNSKTGVYR PVARMGAFSV CKPGYMAPCE GPLVQASRPD SLAGKFLQSL CYDPIIPSKC GHGCCNHQDS TTLSSSSVLG SEFVDYEEHS
301: SAELDKELIS ISNDLNNTAW IRSGKEAEQS LKADDQFRRE YAHSKFSGMV NNGVSSQMVR QDLRALS
101: KRKPFSDEEE HMIMSAQAVL GNKWSVIAKL LPGRTDNAIK NHWNSNLRRK PAEQWKIPLL MSNTEIVYQL YPSMVRRISN ASPKEHLPQE EETGVLSDDK
201: MDDEAKEPPR EQNSKTGVYR PVARMGAFSV CKPGYMAPCE GPLVQASRPD SLAGKFLQSL CYDPIIPSKC GHGCCNHQDS TTLSSSSVLG SEFVDYEEHS
301: SAELDKELIS ISNDLNNTAW IRSGKEAEQS LKADDQFRRE YAHSKFSGMV NNGVSSQMVR QDLRALS
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.