Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX89554 | Canola | nucleus | 74.43 | 78.5 |
| CDY38933 | Canola | nucleus | 73.79 | 78.08 |
| Bra032176.1-P | Field mustard | nucleus | 73.14 | 77.4 |
| AT4G37260.1 | Thale cress | nucleus | 72.49 | 70.0 |
| KRH28419 | Soybean | nucleus | 50.49 | 52.53 |
| KRH57983 | Soybean | nucleus | 49.19 | 51.53 |
| VIT_07s0129g01050.t01 | Wine grape | nucleus | 51.78 | 51.28 |
| KRH77058 | Soybean | nucleus | 50.16 | 50.82 |
| AT5G67300.1 | Thale cress | nucleus | 49.84 | 50.49 |
| VIT_18s0001g09850.t01 | Wine grape | nucleus | 50.16 | 49.52 |
| AT3G50060.1 | Thale cress | nucleus | 46.93 | 48.17 |
| Zm00001d005300_P001 | Maize | nucleus | 42.72 | 46.32 |
| Solyc02g092930.1.1 | Tomato | nucleus | 54.05 | 46.26 |
| Os09t0106700-01 | Rice | nucleus | 47.25 | 45.77 |
| PGSC0003DMT400064306 | Potato | mitochondrion, nucleus | 54.37 | 45.28 |
| TraesCS5B01G157300.1 | Wheat | nucleus | 47.57 | 43.88 |
| TraesCS5A01G159600.1 | Wheat | nucleus | 46.6 | 42.86 |
| TraesCS5D01G164600.1 | Wheat | nucleus | 46.6 | 41.98 |
| Zm00001d019712_P001 | Maize | nucleus | 46.28 | 41.45 |
| EER98550 | Sorghum | nucleus | 47.57 | 40.16 |
| HORVU5Hr1G049880.1 | Barley | plastid | 46.93 | 34.2 |
| AT5G39700.1 | Thale cress | nucleus | 16.5 | 26.84 |
| AT4G33450.1 | Thale cress | nucleus | 21.36 | 26.4 |
| AT1G73410.1 | Thale cress | nucleus | 20.71 | 26.34 |
| AT2G39880.1 | Thale cress | nucleus | 30.1 | 25.34 |
| AT3G09230.1 | Thale cress | nucleus | 31.07 | 24.43 |
| AT3G55730.1 | Thale cress | nucleus | 30.1 | 23.31 |
| AT1G17950.1 | Thale cress | nucleus | 18.77 | 23.29 |
| AT5G17800.1 | Thale cress | nucleus | 22.98 | 21.98 |
| AT3G29020.2 | Thale cress | nucleus | 21.04 | 21.31 |
| AT1G69560.2 | Thale cress | nucleus | 20.39 | 18.21 |
| AT1G26780.2 | Thale cress | nucleus | 21.04 | 18.11 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.2.1 | EntrezGene:816861 | ProteinID:AAB87103.1 | ProteinID:AEC07437.1 | EMBL:AK117263 |
| ArrayExpress:AT2G23290 | EnsemblPlantsGene:AT2G23290 | RefSeq:AT2G23290 | TAIR:AT2G23290 | RefSeq:AT2G23290-TAIR-G | EnsemblPlants:AT2G23290.1 |
| TAIR:AT2G23290.1 | EMBL:AY519574 | Symbol:AtMYB70 | EMBL:BT008343 | GO:GO:0000981 | GO:GO:0001135 |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006357 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0030154 | GO:GO:0043565 |
| GO:GO:0044212 | InterPro:Homeobox-like_sf | InterPro:IPR017930 | InterPro:Myb_dom | RefSeq:NP_179910.1 | UniProt:O22179 |
| PFAM:PF00249 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000084 | PO:PO:0000230 | PO:PO:0000293 |
| PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 |
| PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 |
| PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 |
| PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 |
| PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 |
| PO:PO:0025022 | PO:PO:0025195 | PO:PO:0025281 | PFscan:PS51294 | PANTHER:PTHR10641 | PANTHER:PTHR10641:SF691 |
| InterPro:SANT/Myb | SMART:SM00717 | SUPFAM:SSF46689 | UniParc:UPI00000ABEF1 | SEG:seg | : |
Description
AtMYB70At2g23280 [Source:UniProtKB/TrEMBL;Acc:O22179]
Coordinates
chr2:-:9904506..9906032
Molecular Weight (calculated)
33231.0 Da
IEP (calculated)
5.766
GRAVY (calculated)
-0.614
Length
309 amino acids
Sequence
(BLAST)
(BLAST)
001: MSGSTRKEMD RIKGPWSPEE DDLLQSLVQK HGPRNWSLIS KSIPGRSGKS CRLRWCNQLS PEVEHRGFTA EEDDTIILAH ARFGNKWATI ARLLNGRTDN
101: AIKNHWNSTL KRKCSGGGGG GEEGQSCDFG GNGGYDGNLT DEKPLKRRAS GGGGVVVVTA LSPTGSDVSE QSQSSGSVLP VSSSCHVFKP TARAGGVVIE
201: SSSPEEEEKD PMTCLRLSLP WVNESTTPPE LFPVKREEEE EKEREISGLG GDFMTVVQEM IKTEVRSYMA DLQLGNGGGA GGGASSCMVQ GTNGRNVGFR
301: EFIGLGRIE
101: AIKNHWNSTL KRKCSGGGGG GEEGQSCDFG GNGGYDGNLT DEKPLKRRAS GGGGVVVVTA LSPTGSDVSE QSQSSGSVLP VSSSCHVFKP TARAGGVVIE
201: SSSPEEEEKD PMTCLRLSLP WVNESTTPPE LFPVKREEEE EKEREISGLG GDFMTVVQEM IKTEVRSYMA DLQLGNGGGA GGGASSCMVQ GTNGRNVGFR
301: EFIGLGRIE
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.