Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX75635 | Canola | nucleus | 85.31 | 91.3 |
| CDX69287 | Canola | nucleus | 85.62 | 89.54 |
| Bra011749.1-P | Field mustard | nucleus | 90.94 | 88.72 |
| CDY44045 | Canola | nucleus | 76.88 | 86.32 |
| CDY22442 | Canola | nucleus | 73.12 | 85.09 |
| Bra010593.1-P | Field mustard | nucleus | 80.94 | 84.92 |
| AT2G23290.1 | Thale cress | nucleus | 70.0 | 72.49 |
| KRH28419 | Soybean | nucleus | 51.25 | 55.22 |
| KRH57983 | Soybean | nucleus | 49.69 | 53.9 |
| KRH77058 | Soybean | nucleus | 51.25 | 53.77 |
| AT5G67300.1 | Thale cress | nucleus | 51.25 | 53.77 |
| VIT_07s0129g01050.t01 | Wine grape | nucleus | 50.94 | 52.24 |
| VIT_18s0001g09850.t01 | Wine grape | nucleus | 50.31 | 51.44 |
| AT3G50060.1 | Thale cress | nucleus | 48.12 | 51.16 |
| Solyc02g092930.1.1 | Tomato | nucleus | 52.19 | 46.26 |
| PGSC0003DMT400064306 | Potato | mitochondrion, nucleus | 53.12 | 45.82 |
| Zm00001d005300_P001 | Maize | nucleus | 40.62 | 45.61 |
| Os09t0106700-01 | Rice | nucleus | 45.0 | 45.14 |
| TraesCS5B01G157300.1 | Wheat | nucleus | 46.25 | 44.18 |
| TraesCS5A01G159600.1 | Wheat | nucleus | 45.62 | 43.45 |
| TraesCS5D01G164600.1 | Wheat | nucleus | 45.62 | 42.57 |
| Zm00001d019712_P001 | Maize | nucleus | 45.0 | 41.74 |
| EER98550 | Sorghum | nucleus | 45.0 | 39.34 |
| HORVU5Hr1G049880.1 | Barley | plastid | 45.94 | 34.67 |
| AT5G39700.1 | Thale cress | nucleus | 15.94 | 26.84 |
| AT1G73410.1 | Thale cress | nucleus | 19.69 | 25.93 |
| AT2G39880.1 | Thale cress | nucleus | 29.06 | 25.34 |
| AT4G33450.1 | Thale cress | nucleus | 19.69 | 25.2 |
| AT3G09230.1 | Thale cress | nucleus | 30.31 | 24.68 |
| AT3G55730.1 | Thale cress | nucleus | 29.06 | 23.31 |
| AT1G17950.1 | Thale cress | nucleus | 17.81 | 22.89 |
| AT5G17800.1 | Thale cress | nucleus | 22.5 | 22.29 |
| AT3G29020.2 | Thale cress | nucleus | 20.94 | 21.97 |
| AT1G69560.2 | Thale cress | nucleus | 20.31 | 18.79 |
| AT1G26780.2 | Thale cress | nucleus | 19.69 | 17.55 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.2.1 | EntrezGene:829880 | UniProt:A0A178V4E7 | ProteinID:AEE86774.1 | EMBL:AF062906 |
| ArrayExpress:AT4G37260 | EnsemblPlantsGene:AT4G37260 | RefSeq:AT4G37260 | TAIR:AT4G37260 | RefSeq:AT4G37260-TAIR-G | EnsemblPlants:AT4G37260.1 |
| TAIR:AT4G37260.1 | EMBL:AY063912 | EMBL:AY091267 | EMBL:AY519613 | Unigene:At.56989 | ProteinID:CAB16756.1 |
| ProteinID:CAB80392.1 | GO:GO:0000981 | GO:GO:0001135 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0006357 | GO:GO:0006950 |
| GO:GO:0007154 | GO:GO:0007165 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009628 |
| GO:GO:0009719 | GO:GO:0009723 | GO:GO:0009737 | GO:GO:0009751 | GO:GO:0009753 | GO:GO:0009987 |
| GO:GO:0010200 | GO:GO:0010929 | GO:GO:0019748 | GO:GO:0019760 | GO:GO:0030154 | GO:GO:0043565 |
| GO:GO:0044212 | GO:GO:0046686 | GO:GO:1901001 | InterPro:Homeobox-like_sf | InterPro:IPR017930 | Symbol:MYB73 |
| InterPro:Myb_dom | RefSeq:NP_195443.1 | UniProt:O23160 | ProteinID:OAO99912.1 | PFAM:PF00249 | PO:PO:0000013 |
| PO:PO:0000037 | PO:PO:0000084 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 |
| PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 |
| PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 |
| PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 |
| PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 |
| PO:PO:0020003 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 |
| PO:PO:0025195 | PO:PO:0025281 | PFscan:PS51294 | PANTHER:PTHR10641 | PANTHER:PTHR10641:SF940 | InterPro:SANT/Myb |
| SMART:SM00717 | SUPFAM:SSF46689 | UniParc:UPI000009ED18 | SEG:seg | : | : |
Description
MYB73MYB73 [Source:UniProtKB/TrEMBL;Acc:A0A178V4E7]
Coordinates
chr4:+:17540490..17541799
Molecular Weight (calculated)
34850.7 Da
IEP (calculated)
6.376
GRAVY (calculated)
-0.711
Length
320 amino acids
Sequence
(BLAST)
(BLAST)
001: MSNPTRKNME RIKGPWSPEE DDLLQRLVQK HGPRNWSLIS KSIPGRSGKS CRLRWCNQLS PEVEHRAFSQ EEDETIIRAH ARFGNKWATI SRLLNGRTDN
101: AIKNHWNSTL KRKCSVEGQS CDFGGNGGYD GNLGEEQPLK RTASGGGGVS TGLYMSPGSP SGSDVSEQSS GGAHVFKPTV RSEVTASSSG EDPPTYLSLS
201: LPWTDETVRV NEPVQLNQNT VMDGGYTAEL FPVRKEEQVE VEEEEAKGIS GGFGGEFMTV VQEMIRTEVR SYMADLQRGN VGGSSSGGGG GGSCMPQSVN
301: SRRVGFREFI VNQIGIGKME
101: AIKNHWNSTL KRKCSVEGQS CDFGGNGGYD GNLGEEQPLK RTASGGGGVS TGLYMSPGSP SGSDVSEQSS GGAHVFKPTV RSEVTASSSG EDPPTYLSLS
201: LPWTDETVRV NEPVQLNQNT VMDGGYTAEL FPVRKEEQVE VEEEEAKGIS GGFGGEFMTV VQEMIRTEVR SYMADLQRGN VGGSSSGGGG GGSCMPQSVN
301: SRRVGFREFI VNQIGIGKME
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.