Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr6P15900_001 | Banana | nucleus | 70.07 | 77.45 |
| GSMUA_Achr11P... | Banana | nucleus | 38.49 | 63.93 |
| GSMUA_Achr3P09490_001 | Banana | nucleus | 66.45 | 63.32 |
| GSMUA_Achr9P17000_001 | Banana | nucleus | 61.51 | 61.51 |
| GSMUA_Achr9P04990_001 | Banana | nucleus | 55.59 | 55.96 |
| GSMUA_Achr10P... | Banana | nucleus | 58.55 | 55.45 |
| GSMUA_Achr6P32250_001 | Banana | nucleus | 59.87 | 52.6 |
| Os01t0274800-01 | Rice | nucleus | 45.72 | 52.45 |
| GSMUA_Achr3P16490_001 | Banana | nucleus | 28.95 | 52.38 |
| GSMUA_Achr9P29090_001 | Banana | nucleus | 33.88 | 49.05 |
| GSMUA_Achr3P07700_001 | Banana | nucleus | 32.57 | 48.29 |
| Zm00001d040423_P001 | Maize | nucleus | 46.38 | 47.32 |
| GSMUA_Achr5P27750_001 | Banana | nucleus | 38.49 | 46.43 |
| Zm00001d008251_P002 | Maize | nucleus | 45.39 | 46.15 |
| GSMUA_Achr9P15750_001 | Banana | nucleus | 31.58 | 45.5 |
| EES02758 | Sorghum | nucleus | 45.07 | 45.21 |
| Bra039036.1-P | Field mustard | nucleus | 27.63 | 43.52 |
| EES02759 | Sorghum | nucleus | 39.8 | 42.91 |
| GSMUA_Achr3P18970_001 | Banana | nucleus | 36.84 | 42.75 |
| TraesCS3B01G217100.1 | Wheat | nucleus | 43.75 | 42.49 |
| Zm00001d040426_P001 | Maize | nucleus | 38.82 | 42.45 |
| TraesCS3D01G191400.1 | Wheat | nucleus | 44.41 | 42.06 |
| HORVU3Hr1G038700.2 | Barley | nucleus | 45.39 | 41.82 |
| GSMUA_Achr6P17630_001 | Banana | nucleus | 35.86 | 41.44 |
| AT5G39700.1 | Thale cress | nucleus | 25.66 | 41.05 |
| GSMUA_Achr9P08480_001 | Banana | nucleus | 34.21 | 40.62 |
| TraesCS3A01G187800.1 | Wheat | nucleus | 43.42 | 40.62 |
| GSMUA_Achr10P... | Banana | nucleus | 33.55 | 39.23 |
| CDY67808 | Canola | nucleus | 20.39 | 38.99 |
| Bra025652.1-P | Field mustard | nucleus | 32.24 | 37.84 |
| GSMUA_Achr11P... | Banana | nucleus | 34.21 | 37.82 |
| CDY30264 | Canola | nucleus | 32.24 | 37.69 |
| GSMUA_Achr5P23290_001 | Banana | nucleus | 36.84 | 37.09 |
| CDY44415 | Canola | nucleus | 30.59 | 35.63 |
| GSMUA_Achr6P02580_001 | Banana | nucleus | 41.45 | 35.59 |
| CDY20004 | Canola | nucleus | 31.58 | 33.45 |
| CDY66025 | Canola | nucleus | 30.92 | 32.64 |
| Bra033078.1-P | Field mustard | nucleus | 30.59 | 32.52 |
| AT3G29020.2 | Thale cress | nucleus | 32.57 | 32.46 |
| CDY66170 | Canola | nucleus | 32.24 | 31.21 |
| GSMUA_Achr11P... | Banana | endoplasmic reticulum, golgi | 39.47 | 30.46 |
| GSMUA_Achr6P33470_001 | Banana | nucleus | 20.72 | 28.0 |
| CDX74436 | Canola | nucleus | 32.24 | 27.15 |
| GSMUA_Achr4P20150_001 | Banana | nucleus | 23.68 | 26.77 |
| GSMUA_Achr4P12950_001 | Banana | nucleus | 22.37 | 25.56 |
| GSMUA_Achr1P26140_001 | Banana | nucleus | 23.36 | 25.18 |
| GSMUA_AchrUn_... | Banana | nucleus | 23.03 | 24.73 |
| GSMUA_Achr1P09750_001 | Banana | nucleus | 23.68 | 24.24 |
| GSMUA_Achr3P13070_001 | Banana | nucleus | 23.03 | 24.14 |
| GSMUA_Achr4P09450_001 | Banana | nucleus | 23.36 | 23.51 |
| GSMUA_Achr3P28230_001 | Banana | nucleus | 21.71 | 22.92 |
| GSMUA_Achr9P22600_001 | Banana | nucleus | 21.71 | 22.92 |
| GSMUA_Achr8P25220_001 | Banana | nucleus | 22.04 | 22.64 |
| GSMUA_Achr7P18390_001 | Banana | nucleus, plastid | 34.87 | 22.55 |
| GSMUA_Achr9P03720_001 | Banana | nucleus | 21.38 | 20.19 |
| GSMUA_Achr5P28780_001 | Banana | nucleus | 21.38 | 16.37 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr10P12830_001 | EnsemblPlants:GSMUA_Achr10T12830_001 | EnsemblPlantsGene:GSMUA_Achr10G12830_001 | Gene3D:1.10.10.60 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0005488 | InterPro:Homeobox-like_sf | InterPro:IPR017930 | InterPro:Myb_dom | InterPro:SANT/Myb |
| PANTHER:PTHR10641 | PANTHER:PTHR10641:SF941 | PFAM:PF00249 | PFscan:PS51294 | SEG:seg | SMART:SM00717 |
| SUPFAM:SSF46689 | UniParc:UPI000294DC70 | UniProt:M0RHQ9 | MapMan:15.5.2.1 | : | : |
Description
Predicted protein [Source:GMGC_GENE;Acc:GSMUA_Achr10G12830_001]
Coordinates
chr10:+:21711545..21712802
Molecular Weight (calculated)
33567.1 Da
IEP (calculated)
6.506
GRAVY (calculated)
-0.679
Length
304 amino acids
Sequence
(BLAST)
(BLAST)
001: MASDEPKSIG DMGLFAPPPP PSPGAMECLG GERAWGFQGL AGGKDYHEGE QNSSLGEEAE GGDDTNHESG QQHKLCVRGH WRPAEDAKLK ELVSQYGPQN
101: WNLIAEKLEG RSGKSCRLRW FNQLDPRINR SAFSEEEEER LLAAHRLYGN KWALIARLFP GRTDNAVKNH WHVIMARKHR EQDESASTCT DLSLTSFTSR
201: AFPNLLYRSC PTYQPTHPCD ISIGIKNGCH DKFGDAGRGF FSGVAPMELV PGADQAAYSC STTEASASGT VVYHRRNAWP QAEPDHGREK IRIPFIDFLG
301: VGAT
101: WNLIAEKLEG RSGKSCRLRW FNQLDPRINR SAFSEEEEER LLAAHRLYGN KWALIARLFP GRTDNAVKNH WHVIMARKHR EQDESASTCT DLSLTSFTSR
201: AFPNLLYRSC PTYQPTHPCD ISIGIKNGCH DKFGDAGRGF FSGVAPMELV PGADQAAYSC STTEASASGT VVYHRRNAWP QAEPDHGREK IRIPFIDFLG
301: VGAT
001: MFITEKQVWM DEIVARRASS SWDFPFNDIN IHQHHHRHCN TSHEFEILKS PLGDVAVHEE ESNNNNPNFS NSESGKKETT DSGQSWSSSS SKPSVLGRGH
101: WRPAEDVKLK ELVSIYGPQN WNLIAEKLQG RSGKSCRLRW FNQLDPRINR RAFTEEEEER LMQAHRLYGN KWAMIARLFP GRTDNSVKNH WHVVMARKYR
201: EHSSAYRRRK LMSNNPLKPH LTNNHHPNPN PNYHSFISTN HYFAQPFPEF NLTHHLVNNA PITSDHNQLV LPFHCFQGSL
101: WRPAEDVKLK ELVSIYGPQN WNLIAEKLQG RSGKSCRLRW FNQLDPRINR RAFTEEEEER LMQAHRLYGN KWAMIARLFP GRTDNSVKNH WHVVMARKYR
201: EHSSAYRRRK LMSNNPLKPH LTNNHHPNPN PNYHSFISTN HYFAQPFPEF NLTHHLVNNA PITSDHNQLV LPFHCFQGSL
Arabidopsis Description
MYB117MYB117 [Source:UniProtKB/TrEMBL;Acc:A0A178WCI3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.