Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 3
- nucleus 5
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr3P16490_001 | Banana | nucleus | 27.48 | 49.4 |
| GSMUA_Achr11P... | Banana | nucleus | 28.15 | 46.45 |
| GSMUA_Achr6P02580_001 | Banana | nucleus | 51.99 | 44.35 |
| GSMUA_Achr9P29090_001 | Banana | nucleus | 30.79 | 44.29 |
| GSMUA_Achr3P07700_001 | Banana | nucleus | 29.14 | 42.93 |
| GSMUA_Achr5P27750_001 | Banana | nucleus | 34.44 | 41.27 |
| GSMUA_Achr9P15750_001 | Banana | nucleus | 28.15 | 40.28 |
| GSMUA_Achr10P... | Banana | nucleus | 34.11 | 39.62 |
| GSMUA_Achr11P... | Banana | nucleus | 35.76 | 39.27 |
| GSMUA_Achr9P08480_001 | Banana | nucleus | 33.11 | 39.06 |
| GSMUA_Achr3P18970_001 | Banana | nucleus | 33.77 | 38.93 |
| GSMUA_Achr6P17630_001 | Banana | nucleus | 33.44 | 38.4 |
| GSMUA_Achr6P15900_001 | Banana | nucleus | 34.77 | 38.18 |
| GSMUA_Achr10P... | Banana | nucleus | 37.09 | 36.84 |
| GSMUA_Achr9P17000_001 | Banana | nucleus | 35.43 | 35.2 |
| GSMUA_Achr9P04990_001 | Banana | nucleus | 34.77 | 34.77 |
| GSMUA_Achr3P09490_001 | Banana | nucleus | 36.42 | 34.48 |
| CDY67868 | Canola | nucleus | 33.44 | 33.89 |
| Bra003995.1-P | Field mustard | nucleus | 33.11 | 33.67 |
| CDY07345 | Canola | nucleus | 33.11 | 33.56 |
| Bra004394.1-P | Field mustard | nucleus | 35.43 | 33.44 |
| CDY40941 | Canola | nucleus | 35.43 | 33.44 |
| CDX95921 | Canola | nucleus | 35.1 | 33.12 |
| GSMUA_Achr10P... | Banana | nucleus | 35.1 | 33.02 |
| AT1G69560.2 | Thale cress | nucleus | 36.42 | 31.79 |
| CDY50737 | Canola | nucleus | 35.76 | 31.4 |
| VIT_01s0026g02600.t01 | Wine grape | nucleus | 47.35 | 31.29 |
| CDY46444 | Canola | nucleus | 36.09 | 30.88 |
| Bra016285.1-P | Field mustard | nucleus | 36.09 | 30.88 |
| CDY44993 | Canola | nucleus | 35.76 | 30.59 |
| KRH50566 | Soybean | nucleus | 43.71 | 30.28 |
| AT1G26780.2 | Thale cress | nucleus | 35.76 | 30.08 |
| GSMUA_Achr6P32250_001 | Banana | nucleus | 34.44 | 30.06 |
| GSMUA_Achr6P33470_001 | Banana | nucleus | 21.52 | 28.89 |
| Solyc05g007870.1.1 | Tomato | nucleus | 39.4 | 28.54 |
| KRH74887 | Soybean | plastid | 43.71 | 28.39 |
| KRG89586 | Soybean | nucleus | 45.36 | 28.19 |
| PGSC0003DMT400047415 | Potato | nucleus | 39.4 | 27.74 |
| KRH70748 | Soybean | nucleus | 42.72 | 27.62 |
| GSMUA_Achr11P... | Banana | endoplasmic reticulum, golgi | 34.44 | 26.4 |
| GSMUA_Achr4P20150_001 | Banana | nucleus | 22.52 | 25.28 |
| VIT_14s0108g01010.t01 | Wine grape | nucleus | 39.74 | 25.21 |
| GSMUA_Achr1P26140_001 | Banana | nucleus | 23.51 | 25.18 |
| GSMUA_Achr7P18390_001 | Banana | nucleus, plastid | 39.07 | 25.11 |
| GSMUA_Achr4P12950_001 | Banana | nucleus | 21.85 | 24.81 |
| GSMUA_Achr3P28230_001 | Banana | nucleus | 22.85 | 23.96 |
| GSMUA_Achr1P09750_001 | Banana | nucleus | 23.51 | 23.91 |
| GSMUA_Achr9P22600_001 | Banana | nucleus | 22.19 | 23.26 |
| GSMUA_Achr3P13070_001 | Banana | nucleus | 21.85 | 22.76 |
| GSMUA_AchrUn_... | Banana | nucleus | 21.19 | 22.61 |
| GSMUA_Achr9P03720_001 | Banana | nucleus | 23.18 | 21.74 |
| GSMUA_Achr4P09450_001 | Banana | nucleus | 21.52 | 21.52 |
| GSMUA_Achr8P25220_001 | Banana | nucleus | 20.86 | 21.28 |
| GSMUA_Achr5P28780_001 | Banana | nucleus | 20.86 | 15.87 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr5P23290_001 | EnsemblPlants:GSMUA_Achr5T23290_001 | EnsemblPlantsGene:GSMUA_Achr5G23290_001 | Gene3D:1.10.10.60 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0005488 | InterPro:Homeobox-like_sf | InterPro:IPR017930 | InterPro:Myb_dom | InterPro:SANT/Myb |
| PANTHER:PTHR10641 | PANTHER:PTHR10641:SF697 | PFAM:PF13921 | PFscan:PS51294 | SEG:seg | SMART:SM00717 |
| SUPFAM:SSF46689 | UniParc:UPI000294BF45 | UniProt:M0T104 | MapMan:15.5.2.1 | : | : |
Description
Putative Predicted protein [Source:GMGC_GENE;Acc:GSMUA_Achr5G23290_001]
Coordinates
chr5:+:25055605..25057119
Molecular Weight (calculated)
33956.9 Da
IEP (calculated)
10.176
GRAVY (calculated)
-0.763
Length
302 amino acids
Sequence
(BLAST)
(BLAST)
001: MASGWYADTS SSSSSKEVSS LFAGPTSSLE SCHYGRSSKR TCRTFPFMES CLGFQENPQE NTEVAHVVGE DNPDGGKTCA RGHWRPAEDS KLRRLVELYG
101: PQNWKLIAEN LKGRSGKSCR LRWFNQLDPK INRRPFTEQE EEKLMTAHRL HGNKWATIAR LFPGRTDNAV KNQWHVIMAR KYREQAVVHR RKKLGQHLHR
201: RLGEAAAARH HFFPSIGLHR VAHSGEDAVS GTPFDFFSED KKDQEKKSFN SNKTPISLAI QRSSHASHVS VNGRPFEGNK ESSHLDAVVS PALIDFLGVG
301: AP
101: PQNWKLIAEN LKGRSGKSCR LRWFNQLDPK INRRPFTEQE EEKLMTAHRL HGNKWATIAR LFPGRTDNAV KNQWHVIMAR KYREQAVVHR RKKLGQHLHR
201: RLGEAAAARH HFFPSIGLHR VAHSGEDAVS GTPFDFFSED KKDQEKKSFN SNKTPISLAI QRSSHASHVS VNGRPFEGNK ESSHLDAVVS PALIDFLGVG
301: AP
001: MMCSRGHWRP AEDEKLRELV EQFGPHNWNA IAQKLSGRSG KSCRLRWFNQ LDPRINRNPF TEEEEERLLA SHRIHGNRWS VIARFFPGRT DNAVKNHWHV
101: IMARRGRERS KLRPRGLGHD GTVAATGMIG NYKDCDKERR LATTTAINFP YQFSHINHFQ VLKEFLTGKI GFRNSTTPIQ EGAIDQTKRP MEFYNFLQVN
201: TDSKIHELID NSRKDEEEDV DQNNRIPNEN CVPFFDFLSV GNSASQGLC
101: IMARRGRERS KLRPRGLGHD GTVAATGMIG NYKDCDKERR LATTTAINFP YQFSHINHFQ VLKEFLTGKI GFRNSTTPIQ EGAIDQTKRP MEFYNFLQVN
201: TDSKIHELID NSRKDEEEDV DQNNRIPNEN CVPFFDFLSV GNSASQGLC
Arabidopsis Description
MYB52Transcription factor MYB52 [Source:UniProtKB/Swiss-Prot;Acc:Q6R0C4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.