Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr4P20150_001 | Banana | nucleus | 54.86 | 58.74 |
| KRH05621 | Soybean | nucleus | 52.08 | 55.97 |
| GSMUA_Achr3P28230_001 | Banana | nucleus | 55.21 | 55.21 |
| GSMUA_Achr4P12950_001 | Banana | nucleus | 50.69 | 54.89 |
| GSMUA_Achr3P13070_001 | Banana | nucleus | 54.86 | 54.48 |
| KRH61351 | Soybean | nucleus | 47.92 | 53.28 |
| KRH15420 | Soybean | nucleus | 48.96 | 51.65 |
| GSMUA_Achr1P09750_001 | Banana | nucleus | 53.12 | 51.52 |
| GSMUA_Achr1P26140_001 | Banana | nucleus | 48.96 | 50.0 |
| GSMUA_Achr8P25220_001 | Banana | nucleus | 51.39 | 50.0 |
| CDY12830 | Canola | nucleus | 43.06 | 49.01 |
| GSMUA_Achr4P09450_001 | Banana | nucleus | 50.69 | 48.34 |
| Zm00001d005300_P001 | Maize | nucleus | 47.22 | 47.72 |
| GSMUA_AchrUn_... | Banana | nucleus | 46.88 | 47.7 |
| Os09t0106700-01 | Rice | nucleus | 51.74 | 46.71 |
| Bra036048.1-P | Field mustard | nucleus | 43.06 | 46.62 |
| CDY01420 | Canola | nucleus | 42.36 | 46.39 |
| CDY30608 | Canola | nucleus | 42.36 | 46.04 |
| CDY23023 | Canola | nucleus | 45.83 | 45.52 |
| CDY57355 | Canola | nucleus | 43.75 | 45.32 |
| Bra012149.1-P | Field mustard | nucleus | 46.53 | 45.27 |
| AT5G67300.1 | Thale cress | nucleus | 47.57 | 44.92 |
| Bra012910.1-P | Field mustard | nucleus | 45.14 | 44.37 |
| CDY02098 | Canola | nucleus | 45.14 | 44.37 |
| TraesCS5B01G157300.1 | Wheat | nucleus | 51.04 | 43.88 |
| VIT_03s0180g00210.t01 | Wine grape | nucleus | 45.83 | 43.56 |
| TraesCS5A01G159600.1 | Wheat | nucleus | 50.69 | 43.45 |
| Zm00001d019712_P001 | Maize | nucleus | 51.39 | 42.9 |
| TraesCS5D01G164600.1 | Wheat | nucleus | 51.04 | 42.86 |
| AT3G50060.1 | Thale cress | nucleus | 44.79 | 42.86 |
| Bra029990.1-P | Field mustard | nucleus | 43.06 | 42.18 |
| EER98550 | Sorghum | nucleus | 51.39 | 40.44 |
| GSMUA_Achr3P16490_001 | Banana | nucleus | 21.53 | 36.9 |
| CDX68566 | Canola | nucleus | 38.54 | 35.35 |
| GSMUA_Achr6P33470_001 | Banana | nucleus | 26.74 | 34.22 |
| HORVU5Hr1G049880.1 | Barley | plastid | 49.65 | 33.73 |
| GSMUA_Achr3P07700_001 | Banana | nucleus | 21.88 | 30.73 |
| GSMUA_Achr11P... | Banana | nucleus | 19.44 | 30.6 |
| GSMUA_Achr9P29090_001 | Banana | nucleus | 21.18 | 29.05 |
| GSMUA_Achr9P15750_001 | Banana | nucleus | 20.83 | 28.44 |
| GSMUA_Achr9P03720_001 | Banana | nucleus | 31.25 | 27.95 |
| GSMUA_Achr9P08480_001 | Banana | nucleus | 23.61 | 26.56 |
| GSMUA_Achr6P17630_001 | Banana | nucleus | 23.26 | 25.48 |
| GSMUA_Achr10P... | Banana | nucleus | 22.22 | 24.62 |
| GSMUA_Achr3P18970_001 | Banana | nucleus | 22.22 | 24.43 |
| GSMUA_Achr6P15900_001 | Banana | nucleus | 23.26 | 24.36 |
| GSMUA_Achr9P04990_001 | Banana | nucleus | 25.0 | 23.84 |
| GSMUA_Achr5P27750_001 | Banana | nucleus | 20.83 | 23.81 |
| GSMUA_Achr5P28780_001 | Banana | nucleus | 31.25 | 22.67 |
| GSMUA_Achr11P... | Banana | nucleus | 21.53 | 22.55 |
| GSMUA_Achr5P23290_001 | Banana | nucleus | 23.26 | 22.19 |
| GSMUA_Achr6P32250_001 | Banana | nucleus | 26.39 | 21.97 |
| GSMUA_Achr10P... | Banana | nucleus | 22.92 | 21.71 |
| GSMUA_Achr3P09490_001 | Banana | nucleus | 23.96 | 21.63 |
| GSMUA_Achr10P... | Banana | nucleus | 23.96 | 21.5 |
| GSMUA_Achr9P17000_001 | Banana | nucleus | 22.22 | 21.05 |
| GSMUA_Achr6P02580_001 | Banana | nucleus | 24.65 | 20.06 |
| GSMUA_Achr11P... | Banana | endoplasmic reticulum, golgi | 24.31 | 17.77 |
| GSMUA_Achr7P18390_001 | Banana | nucleus, plastid | 23.26 | 14.26 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr9P22600_001 | EnsemblPlants:GSMUA_Achr9T22600_001 | EnsemblPlantsGene:GSMUA_Achr9G22600_001 | Gene3D:1.10.10.60 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0005488 | InterPro:Homeobox-like_sf | InterPro:IPR017930 | InterPro:Myb_dom | InterPro:SANT/Myb |
| PANTHER:PTHR10641 | PANTHER:PTHR10641:SF940 | PFAM:PF00249 | PFscan:PS51294 | SEG:seg | SMART:SM00717 |
| SUPFAM:SSF46689 | UniParc:UPI000296FA13 | UniProt:M0U2L9 | MapMan:15.5.2.1 | : | : |
Description
Transcription factor MYB44 [Source:GMGC_GENE;Acc:GSMUA_Achr9G22600_001]
Coordinates
chr9:+:27709017..27714201
Molecular Weight (calculated)
31751.7 Da
IEP (calculated)
9.220
GRAVY (calculated)
-0.516
Length
288 amino acids
Sequence
(BLAST)
(BLAST)
001: MDRIKGPWSI EEDEALRRLV ERHGPRNWTL ISRSIPGRSG KSCRLRWCNQ LSPQVEHRPF TPEEDETIIR AHRRFGNKWA TIARLLSGRT DNAIKNHWNS
101: TLKRKASSVG PVPASASAQL CLSPGSPTGT AGITVPPSSS PSTATFQEHD LQIEATGVSC TASPSSYAKD DPLTSLTLSL PGTDRTVTSN QIHQCPDAKT
201: GDDRPPQRPF QFSAELLAVM QEMVRSEVRS YMSCLEQSGI TRALQPPEAA ICDAAPKRIG LKPNSVFVLS ITKIQRSNCR YLFPMTNC
101: TLKRKASSVG PVPASASAQL CLSPGSPTGT AGITVPPSSS PSTATFQEHD LQIEATGVSC TASPSSYAKD DPLTSLTLSL PGTDRTVTSN QIHQCPDAKT
201: GDDRPPQRPF QFSAELLAVM QEMVRSEVRS YMSCLEQSGI TRALQPPEAA ICDAAPKRIG LKPNSVFVLS ITKIQRSNCR YLFPMTNC
001: MSNPTRKNME RIKGPWSPEE DDLLQRLVQK HGPRNWSLIS KSIPGRSGKS CRLRWCNQLS PEVEHRAFSQ EEDETIIRAH ARFGNKWATI SRLLNGRTDN
101: AIKNHWNSTL KRKCSVEGQS CDFGGNGGYD GNLGEEQPLK RTASGGGGVS TGLYMSPGSP SGSDVSEQSS GGAHVFKPTV RSEVTASSSG EDPPTYLSLS
201: LPWTDETVRV NEPVQLNQNT VMDGGYTAEL FPVRKEEQVE VEEEEAKGIS GGFGGEFMTV VQEMIRTEVR SYMADLQRGN VGGSSSGGGG GGSCMPQSVN
301: SRRVGFREFI VNQIGIGKME
101: AIKNHWNSTL KRKCSVEGQS CDFGGNGGYD GNLGEEQPLK RTASGGGGVS TGLYMSPGSP SGSDVSEQSS GGAHVFKPTV RSEVTASSSG EDPPTYLSLS
201: LPWTDETVRV NEPVQLNQNT VMDGGYTAEL FPVRKEEQVE VEEEEAKGIS GGFGGEFMTV VQEMIRTEVR SYMADLQRGN VGGSSSGGGG GGSCMPQSVN
301: SRRVGFREFI VNQIGIGKME
Arabidopsis Description
MYB73MYB73 [Source:UniProtKB/TrEMBL;Acc:A0A178V4E7]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.