Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY01420 | Canola | nucleus | 86.82 | 97.72 |
| CDY12830 | Canola | nucleus | 78.72 | 92.09 |
| AT5G67300.1 | Thale cress | nucleus | 87.5 | 84.92 |
| Bra012910.1-P | Field mustard | nucleus | 61.49 | 62.12 |
| Bra036048.1-P | Field mustard | nucleus | 55.41 | 61.65 |
| Bra017813.1-P | Field mustard | nucleus | 50.0 | 55.85 |
| Bra029990.1-P | Field mustard | nucleus | 54.73 | 55.1 |
| GSMUA_Achr4P20150_001 | Banana | nucleus | 50.0 | 55.02 |
| KRH61351 | Soybean | nucleus | 47.3 | 54.05 |
| Bra032176.1-P | Field mustard | nucleus | 53.04 | 53.77 |
| KRH05621 | Soybean | nucleus | 47.64 | 52.61 |
| Bra010593.1-P | Field mustard | nucleus | 54.05 | 52.46 |
| KRH15420 | Soybean | nucleus | 46.96 | 50.92 |
| GSMUA_Achr1P26140_001 | Banana | nucleus | 47.97 | 50.35 |
| Bra011749.1-P | Field mustard | nucleus | 54.73 | 49.39 |
| GSMUA_Achr3P13070_001 | Banana | nucleus | 47.64 | 48.62 |
| Zm00001d005300_P001 | Maize | nucleus | 46.62 | 48.42 |
| GSMUA_Achr1P09750_001 | Banana | nucleus | 47.97 | 47.81 |
| GSMUA_Achr4P12950_001 | Banana | nucleus | 41.89 | 46.62 |
| GSMUA_Achr9P22600_001 | Banana | nucleus | 45.27 | 46.53 |
| GSMUA_Achr4P09450_001 | Banana | nucleus | 47.3 | 46.36 |
| GSMUA_Achr3P28230_001 | Banana | nucleus | 44.93 | 46.18 |
| Os09t0106700-01 | Rice | nucleus | 49.66 | 46.08 |
| VIT_03s0180g00210.t01 | Wine grape | nucleus | 46.28 | 45.21 |
| GSMUA_Achr8P25220_001 | Banana | nucleus | 44.59 | 44.59 |
| TraesCS5B01G157300.1 | Wheat | nucleus | 50.0 | 44.18 |
| GSMUA_AchrUn_... | Banana | nucleus | 41.89 | 43.82 |
| TraesCS5A01G159600.1 | Wheat | nucleus | 49.66 | 43.75 |
| TraesCS5D01G164600.1 | Wheat | nucleus | 50.0 | 43.15 |
| Zm00001d019712_P001 | Maize | nucleus | 50.0 | 42.9 |
| EER98550 | Sorghum | nucleus | 49.66 | 40.16 |
| HORVU5Hr1G049880.1 | Barley | plastid | 48.99 | 34.2 |
| Bra039036.1-P | Field mustard | nucleus | 20.61 | 31.61 |
| Bra015992.1-P | Field mustard | nucleus | 22.64 | 29.39 |
| Bra008096.1-P | Field mustard | nucleus | 21.96 | 27.78 |
| Bra011441.1-P | Field mustard | nucleus | 21.96 | 26.1 |
| Bra034565.1-P | Field mustard | nucleus | 21.96 | 25.9 |
| Bra016575.1-P | Field mustard | nucleus | 20.95 | 25.62 |
| Bra031008.1-P | Field mustard | nucleus | 21.28 | 25.51 |
| Bra001323.1-P | Field mustard | nucleus | 28.72 | 25.37 |
| Bra037004.1-P | Field mustard | nucleus | 20.61 | 25.31 |
| Bra025652.1-P | Field mustard | nucleus | 21.62 | 24.71 |
| Bra007186.1-P | Field mustard | nucleus | 30.74 | 24.53 |
| Bra033078.1-P | Field mustard | nucleus | 23.65 | 24.48 |
| Bra034057.1-P | Field mustard | nucleus | 31.42 | 24.03 |
| Bra005006.1-P | Field mustard | nucleus | 30.41 | 22.61 |
| Bra003995.1-P | Field mustard | nucleus | 22.64 | 22.56 |
| Bra004394.1-P | Field mustard | nucleus | 22.97 | 21.25 |
| Bra002107.1-P | Field mustard | nucleus | 22.64 | 20.68 |
| Bra006422.1-P | Field mustard | nucleus | 21.62 | 20.45 |
| Bra023637.1-P | Field mustard | nucleus | 21.96 | 20.44 |
| Bra016285.1-P | Field mustard | nucleus | 21.96 | 18.41 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.2.1 | EnsemblPlantsGene:Bra012149 | EnsemblPlants:Bra012149.1 | EnsemblPlants:Bra012149.1-P | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0006950 | GO:GO:0007154 |
| GO:GO:0007165 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009414 | GO:GO:0009605 |
| GO:GO:0009607 | GO:GO:0009628 | GO:GO:0009651 | GO:GO:0009719 | GO:GO:0009723 | GO:GO:0009733 |
| GO:GO:0009737 | GO:GO:0009739 | GO:GO:0009751 | GO:GO:0009753 | GO:GO:0009987 | GO:GO:0010200 |
| GO:GO:0010929 | GO:GO:0042742 | GO:GO:0046686 | GO:GO:0050832 | GO:GO:2000022 | GO:GO:2000031 |
| InterPro:Homeobox-like_sf | InterPro:IPR017930 | UniProt:M4D6P0 | InterPro:Myb_dom | PFAM:PF00249 | PFscan:PS51294 |
| PANTHER:PTHR10641 | PANTHER:PTHR10641:SF691 | InterPro:SANT/Myb | SMART:SM00717 | SUPFAM:SSF46689 | UniParc:UPI00025416EE |
| SEG:seg | : | : | : | : | : |
Description
AT5G67300 (E=4e-133) ATMYBR1, ATMYB44, MYBR1 | MYBR1 (MYB DOMAIN PROTEIN R1); DNA binding / transcription factor
Coordinates
chrA07:-:9724881..9725771
Molecular Weight (calculated)
32340.1 Da
IEP (calculated)
8.335
GRAVY (calculated)
-0.577
Length
296 amino acids
Sequence
(BLAST)
(BLAST)
001: MADRIKGPWS PEEDEQLRKL VVKYGPRNWT VISKSIPGRS GKSCRLRWCN QLSPQVEHRP FSAEEDETIA RAHAQFGNKW ATIARLLNGR TDNAVKNHWN
101: STLKRKCGGF YASTEDQRPV KRSVSDGYPL VANGLLMSPG SPTGSDVSDS STLPVLTSVE VFKPVPRAGG VMLPLPIETS TFCDDPATSL SLSLPGADVS
201: EESNRSHEST NNNTSRSHNT NTMSLMQFSG GFRGAIEEMG RSFGGNGGEF MAVVQEMIKA EVRSYMAEMQ RNHNGGGGFR DNGMIPMSQV GVGRIE
101: STLKRKCGGF YASTEDQRPV KRSVSDGYPL VANGLLMSPG SPTGSDVSDS STLPVLTSVE VFKPVPRAGG VMLPLPIETS TFCDDPATSL SLSLPGADVS
201: EESNRSHEST NNNTSRSHNT NTMSLMQFSG GFRGAIEEMG RSFGGNGGEF MAVVQEMIKA EVRSYMAEMQ RNHNGGGGFR DNGMIPMSQV GVGRIE
001: MADRIKGPWS PEEDEQLRRL VVKYGPRNWT VISKSIPGRS GKSCRLRWCN QLSPQVEHRP FSAEEDETIA RAHAQFGNKW ATIARLLNGR TDNAVKNHWN
101: STLKRKCGGY DHRGYDGSED HRPVKRSVSA GSPPVVTGLY MSPGSPTGSD VSDSSTIPIL PSVELFKPVP RPGAVVLPLP IETSSSSDDP PTSLSLSLPG
201: ADVSEESNRS HESTNINNTT SSRHNHNNTV SFMPFSGGFR GAIEEMGKSF PGNGGEFMAV VQEMIKAEVR SYMTEMQRNN GGGFVGGFID NGMIPMSQIG
301: VGRIE
101: STLKRKCGGY DHRGYDGSED HRPVKRSVSA GSPPVVTGLY MSPGSPTGSD VSDSSTIPIL PSVELFKPVP RPGAVVLPLP IETSSSSDDP PTSLSLSLPG
201: ADVSEESNRS HESTNINNTT SSRHNHNNTV SFMPFSGGFR GAIEEMGKSF PGNGGEFMAV VQEMIKAEVR SYMTEMQRNN GGGFVGGFID NGMIPMSQIG
301: VGRIE
Arabidopsis Description
MYB44MYBR1 [Source:UniProtKB/TrEMBL;Acc:A0A178UQ74]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.