Factsheet for Bra034057.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY70901	Canola	nucleus	73.13	98.95
CDY70773	Canola	nucleus	71.83	97.2
Bra001323.1-P	Field mustard	nucleus	72.61	83.88
AT3G09230.1	Thale cress	nucleus	70.8	69.72
Bra007186.1-P	Field mustard	nucleus	33.85	35.31
Bra017813.1-P	Field mustard	nucleus	23.26	33.96
Bra005006.1-P	Field mustard	nucleus	34.37	33.42
Bra036048.1-P	Field mustard	nucleus	22.74	33.08
Bra032176.1-P	Field mustard	nucleus	24.81	32.88
Bra010593.1-P	Field mustard	nucleus	25.32	32.13
Bra012910.1-P	Field mustard	nucleus	24.29	32.08
Bra012149.1-P	Field mustard	nucleus	24.03	31.42
Bra015992.1-P	Field mustard	nucleus	18.35	31.14
Bra011749.1-P	Field mustard	nucleus	26.1	30.79
Bra029990.1-P	Field mustard	nucleus	23.26	30.61
Bra008096.1-P	Field mustard	nucleus	17.83	29.49
Bra031008.1-P	Field mustard	nucleus	18.6	29.15
Bra039036.1-P	Field mustard	nucleus	14.47	29.02
Bra011441.1-P	Field mustard	nucleus	17.83	27.71
Bra016575.1-P	Field mustard	nucleus	17.31	27.69
Bra034565.1-P	Field mustard	nucleus	17.83	27.49
Bra037004.1-P	Field mustard	nucleus	16.8	26.97
Bra025652.1-P	Field mustard	nucleus	16.8	25.1
Bra003995.1-P	Field mustard	nucleus	17.31	22.56
Bra033078.1-P	Field mustard	nucleus	16.54	22.38
Bra004394.1-P	Field mustard	nucleus	18.35	22.19
Bra006422.1-P	Field mustard	nucleus	17.83	22.04
Bra023637.1-P	Field mustard	nucleus	16.8	20.44
Bra016285.1-P	Field mustard	nucleus	18.6	20.4
Bra002107.1-P	Field mustard	nucleus	16.8	20.06

Protein Annotations

EnsemblPlants:Bra034057.1	EnsemblPlants:Bra034057.1-P	EnsemblPlantsGene:Bra034057	Gene3D:1.10.10.60	GO:GO:0003674	GO:GO:0003676
GO:GO:0003677	GO:GO:0005488	InterPro:Homeobox-like_sf	InterPro:IPR017930	InterPro:Myb_dom	InterPro:SANT/Myb
PANTHER:PTHR10641	PANTHER:PTHR10641:SF524	PFAM:PF00249	PFscan:PS51294	SEG:seg	SMART:SM00717
SUPFAM:SSF46689	UniParc:UPI0002176E0A	UniProt:M4EZ14	MapMan:15.5.2.1	:	:

Description

AT3G09230 (E=1e-140) AtMYB1 | AtMYB1 (myb domain protein 1); DNA binding / transcription factor

Coordinates

chrA01:-:27665372..27667503

Molecular Weight (calculated)

42656.9 Da

IEP (calculated)

6.837

GRAVY (calculated)

-0.688

Length

387 amino acids

Sequence
(BLAST)

001: MEGEMWGRSG IGEIEEAVAG GRRDEHDGGV AMFVGEGTSG RRRKKRIKGT WSREEDVMLS ELVEKFGPRN WSLMARSIPG RSGKSCRLRW CNQLDPSLKR
101: NPFTEVEDEA IITAHAIHGN KWSIIAKLLP GRTDNAIKNH WNATLRRRCT DFETPTTNTA TRNLVLHDSR LDRTMNTFAS SEETLSSGGG GGGGGHVTTP
201: LVSSDGKEAT SMEISEEQCA DKANEEDISR QECNNDPPTL FRPVAKLSSF NPYNHMEGSS TPHTLNQNKF QSCKQDTAML RLLEGAYSER FVPQKCGSGC
301: CSVSQKDSLL GPEFVDYLDP PTFPSYELAA IATDISSLAW LRSGLESSSV RTMEEAAGRL RPQGTRGHRD HCLVSEQGKS RTNVLST

Best Arabidopsis Sequence Match ( AT3G09230.1 )
(BLAST)

001: MEAEIVRRSE VTGLRREVEE SSIGRGDCDG DGGDVGEDAA GFVGTSGRGR RDRVKGPWSK EEDDVLSELV KRLGARNWSF IARSIPGRSG KSCRLRWCNQ
101: LNPNLIRNSF TEVEDQAIIA AHAIHGNKWA VIAKLLPGRT DNAIKNHWNS ALRRRFIDFE KAKNIGTGSL VVDDSGFDRT TTVASSEETL SSGGGCHVTT
201: PIVSPEGKEA TTSMEMSEEQ CVEKTNGEGI SRQDDKDPPT LFRPVPRLSS FNACNHMEGS PSPHIQDQNQ LQSSKQDAAM LRLLEGAYSE RFVPQTCGGG
301: CCSNNPDGSF QQESLLGPEF VDYLDSPTFP SSELAAIATE IGSLAWLRSG LESSSVRVME DAVGRLRPQG SRGHRDHYLV SEQGTNITNV LST

Arabidopsis Description

MYB1Transcription factor MYB1 [Source:UniProtKB/Swiss-Prot;Acc:Q42575]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.