Factsheet for GSMUA_Achr3P09490_001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr9P17000_001	Banana	nucleus	70.53	74.01
GSMUA_Achr6P15900_001	Banana	nucleus	57.99	67.27
GSMUA_Achr10P...	Banana	nucleus	63.32	66.45
GSMUA_Achr11P...	Banana	nucleus	36.05	62.84
GSMUA_Achr9P04990_001	Banana	nucleus	51.72	54.64
GSMUA_Achr10P...	Banana	nucleus	54.23	53.89
GSMUA_Achr3P16490_001	Banana	nucleus	28.21	53.57
GSMUA_Achr6P32250_001	Banana	nucleus	57.37	52.89
Os01t0274800-01	Rice	nucleus	41.07	49.43
GSMUA_Achr9P29090_001	Banana	nucleus	31.03	47.14
GSMUA_Achr3P07700_001	Banana	nucleus	29.47	45.85
Bra039036.1-P	Field mustard	nucleus	26.96	44.56
GSMUA_Achr9P15750_001	Banana	nucleus	29.47	44.55
GSMUA_Achr5P27750_001	Banana	nucleus	34.8	44.05
Zm00001d040423_P001	Maize	nucleus	41.07	43.96
EES02758	Sorghum	nucleus	41.69	43.89
Zm00001d008251_P002	Maize	nucleus	41.07	43.81
EES02759	Sorghum	nucleus	38.24	43.26
GSMUA_Achr6P17630_001	Banana	nucleus	35.42	42.97
TraesCS3B01G217100.1	Wheat	nucleus	41.69	42.49
TraesCS3D01G191400.1	Wheat	nucleus	42.32	42.06
GSMUA_Achr9P08480_001	Banana	nucleus	33.23	41.41
Zm00001d040426_P001	Maize	nucleus	36.05	41.37
TraesCS3A01G187800.1	Wheat	nucleus	41.69	40.92
HORVU3Hr1G038700.2	Barley	nucleus	41.69	40.3
GSMUA_Achr3P18970_001	Banana	nucleus	32.6	39.69
GSMUA_Achr10P...	Banana	nucleus	32.29	39.62
AT5G39700.1	Thale cress	nucleus	22.57	37.89
GSMUA_Achr11P...	Banana	nucleus	32.6	37.82
GSMUA_Achr5P23290_001	Banana	nucleus	34.48	36.42
CDY44415	Canola	nucleus	29.15	35.63
CDY67808	Canola	nucleus	17.55	35.22
Bra025652.1-P	Field mustard	nucleus	28.21	34.75
CDY30264	Canola	nucleus	28.21	34.62
CDY20004	Canola	nucleus	30.41	33.8
GSMUA_Achr6P02580_001	Banana	nucleus	37.3	33.62
AT3G29020.2	Thale cress	nucleus	31.66	33.11
CDY66025	Canola	nucleus	29.78	32.99
Bra033078.1-P	Field mustard	nucleus	29.15	32.52
CDY66170	Canola	nucleus	30.72	31.21
GSMUA_Achr11P...	Banana	endoplasmic reticulum, golgi	36.36	29.44
GSMUA_Achr6P33470_001	Banana	nucleus	19.75	28.0
GSMUA_Achr4P20150_001	Banana	nucleus	23.2	27.51
GSMUA_Achr4P12950_001	Banana	nucleus	21.63	25.94
GSMUA_Achr1P26140_001	Banana	nucleus	22.88	25.89
GSMUA_Achr3P13070_001	Banana	nucleus	22.88	25.17
CDX74436	Canola	nucleus	28.21	24.93
GSMUA_Achr1P09750_001	Banana	nucleus	23.2	24.92
GSMUA_Achr4P09450_001	Banana	nucleus	22.88	24.17
GSMUA_Achr9P22600_001	Banana	nucleus	21.63	23.96
GSMUA_AchrUn_...	Banana	nucleus	21.0	23.67
GSMUA_Achr3P28230_001	Banana	nucleus	21.0	23.26
GSMUA_Achr7P18390_001	Banana	nucleus, plastid	34.17	23.19
GSMUA_Achr8P25220_001	Banana	nucleus	20.69	22.3
GSMUA_Achr9P03720_001	Banana	nucleus	20.69	20.5
GSMUA_Achr5P28780_001	Banana	nucleus	20.38	16.37

Protein Annotations

EnsemblPlants:GSMUA_Achr3P09490_001	EnsemblPlants:GSMUA_Achr3T09490_001	EnsemblPlantsGene:GSMUA_Achr3G09490_001	Gene3D:1.10.10.60	GO:GO:0003674	GO:GO:0003676
GO:GO:0003677	GO:GO:0005488	InterPro:Homeobox-like_sf	InterPro:IPR017930	InterPro:Myb_dom	InterPro:SANT/Myb
PANTHER:PTHR10641	PANTHER:PTHR10641:SF697	PFAM:PF00249	PFscan:PS51294	SEG:seg	SMART:SM00717
SUPFAM:SSF46689	UniParc:UPI0002956D15	UniProt:M0SD66	MapMan:15.5.2.1	:	:

Description

MYB family transcription factor, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr3G09490_001]

Coordinates

chr3:+:6873436..6874824

Molecular Weight (calculated)

35440.3 Da

IEP (calculated)

7.719

GRAVY (calculated)

-0.731

Length

319 amino acids

Sequence
(BLAST)

001: MASNELKATA DMGFFPPPLP PFPGALGSPF GERECKGVEQ GWVFQISRWG GQEHHGGEED EGGGNSTTHE SVQHHKLCAR GHWRPAEDTR LRQLVSQYGP
101: QNWNLIAEKL EGRSGKSCRL RWFNQLDPRI NRRAFSEEEE KRLLAAHRLY GNKWALIARL FPGRTDNAVK NHWHVIMARK HREQSNDESA STCTTDLSLN
201: SFSTITSVVG PSSLSRHNPP PYQTHLHDLV NGYGEKVLSA GNQCHQKSDD PGSGFLPNGG APIRWFPGFD QSGSSANPEI SAKGTVDYHM SKAWLQGETT
301: YGREKISLPF IDFLGVGAT

Best Arabidopsis Sequence Match ( AT1G69560.2 )
(BLAST)

001: MMFKVIFNIC SSPPMRMEMV HADVASLSIT PCFPSSLSSS SHHHYNQQQH CIMSEDQHHS MDQTTSSDYF SLNIDNAQHL RSYYTSHREE DMNPNLSDYS
101: NCNKKDTTVY RSCGHSSKAS VSRGHWRPAE DTKLKELVAV YGPQNWNLIA EKLQGRSGKS CRLRWFNQLD PRINRRAFTE EEEERLMQAH RLYGNKWAMI
201: ARLFPGRTDN SVKNHWHVIM ARKFREQSSS YRRRKTMVSL KPLINPNPHI FNDFDPTRLA LTHLASSDHK QLMLPVPCFP GYDHENESPL MVDMFETQMM
301: VGDYIAWTQE ATTFDFLNQT GKSEIFERIN EEKKPPFFDF LGLGTV

Arabidopsis Description

MYB105myb domain protein 105 [Source:TAIR;Acc:AT1G69560]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.