Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra025652.1-P | Field mustard | nucleus | 95.0 | 95.37 |
| CDX74436 | Canola | nucleus | 96.15 | 69.25 |
| CDY67808 | Canola | nucleus | 35.77 | 58.49 |
| CDY44415 | Canola | nucleus | 51.15 | 50.96 |
| CDY20004 | Canola | nucleus | 52.69 | 47.74 |
| CDY35992 | Canola | nucleus | 28.46 | 47.13 |
| CDY66025 | Canola | nucleus | 51.92 | 46.88 |
| CDY21728 | Canola | nucleus | 28.08 | 46.5 |
| CDY66170 | Canola | nucleus | 51.54 | 42.68 |
| CDX83880 | Canola | nucleus | 28.85 | 41.21 |
| AT5G39700.1 | Thale cress | nucleus | 29.62 | 40.53 |
| CDX72988 | Canola | nucleus | 33.08 | 38.05 |
| CDX96475 | Canola | nucleus | 33.08 | 37.72 |
| CDX82074 | Canola | nucleus | 33.08 | 36.91 |
| CDY58312 | Canola | nucleus | 33.08 | 36.75 |
| CDX96742 | Canola | nucleus | 33.46 | 35.95 |
| GSMUA_Achr5P27750_001 | Banana | nucleus | 34.62 | 35.71 |
| CDX81853 | Canola | nucleus | 33.46 | 35.22 |
| CDY71713 | Canola | nucleus | 30.77 | 34.78 |
| Os01t0274800-01 | Rice | nucleus | 35.38 | 34.72 |
| CDY21727 | Canola | nucleus | 33.46 | 34.66 |
| GSMUA_Achr6P15900_001 | Banana | nucleus | 36.15 | 34.18 |
| CDX68977 | Canola | nucleus | 31.54 | 32.8 |
| CDY28302 | Canola | nucleus | 31.54 | 32.67 |
| CDX75353 | Canola | nucleus | 31.54 | 32.67 |
| GSMUA_Achr10P... | Banana | nucleus | 37.69 | 32.24 |
| CDY07345 | Canola | nucleus | 35.77 | 31.21 |
| GSMUA_Achr9P04990_001 | Banana | nucleus | 36.15 | 31.13 |
| CDX72405 | Canola | nucleus | 28.85 | 31.12 |
| CDY67868 | Canola | nucleus | 35.38 | 30.87 |
| CDY46114 | Canola | nucleus | 28.46 | 30.71 |
| CDY02687 | Canola | nucleus | 36.54 | 30.65 |
| CDX85443 | Canola | nucleus | 36.15 | 30.62 |
| CDX83109 | Canola | nucleus | 18.85 | 30.25 |
| EES02760 | Sorghum | nucleus | 30.77 | 29.96 |
| CDY69058 | Canola | nucleus | 30.38 | 29.92 |
| CDY16884 | Canola | nucleus | 35.38 | 29.49 |
| CDX78761 | Canola | nucleus | 35.38 | 29.39 |
| TraesCS3B01G217100.1 | Wheat | nucleus | 35.38 | 29.39 |
| CDY40941 | Canola | nucleus | 36.15 | 29.38 |
| CDX95921 | Canola | nucleus | 36.15 | 29.38 |
| GSMUA_Achr9P17000_001 | Banana | nucleus | 34.23 | 29.28 |
| CDX70776 | Canola | nucleus | 34.62 | 28.75 |
| CDY38460 | Canola | nucleus | 35.77 | 28.7 |
| TraesCS3D01G191400.1 | Wheat | nucleus | 35.38 | 28.66 |
| TraesCS3A01G187800.1 | Wheat | nucleus | 35.77 | 28.62 |
| GSMUA_Achr10P... | Banana | nucleus | 35.0 | 28.35 |
| GSMUA_Achr3P09490_001 | Banana | nucleus | 34.62 | 28.21 |
| HORVU3Hr1G038700.2 | Barley | nucleus | 35.38 | 27.88 |
| Zm00001d040428_P001 | Maize | nucleus | 30.0 | 27.56 |
| CDY50737 | Canola | nucleus | 35.38 | 26.74 |
| GSMUA_Achr6P32250_001 | Banana | nucleus | 35.38 | 26.59 |
| CDY44993 | Canola | nucleus | 35.77 | 26.35 |
| CDY46444 | Canola | nucleus | 35.38 | 26.06 |
| GSMUA_Achr11P... | Banana | endoplasmic reticulum, golgi | 39.23 | 25.89 |
| CDY12830 | Canola | nucleus | 23.46 | 24.11 |
| CDY01420 | Canola | nucleus | 23.46 | 23.19 |
| CDX72621 | Canola | nucleus | 22.69 | 22.26 |
| CDY22442 | Canola | nucleus | 23.46 | 22.18 |
| CDY44045 | Canola | nucleus | 23.85 | 21.75 |
| CDY29542 | Canola | nucleus | 21.92 | 21.51 |
| CDY30608 | Canola | nucleus | 21.92 | 21.51 |
| CDY38933 | Canola | nucleus | 23.85 | 21.23 |
| CDY57355 | Canola | nucleus | 22.69 | 21.22 |
| CDX89554 | Canola | nucleus | 23.85 | 21.16 |
| CDY23023 | Canola | nucleus | 23.46 | 21.03 |
| CDY02098 | Canola | nucleus | 23.46 | 20.82 |
| CDX75635 | Canola | nucleus | 23.85 | 20.74 |
| CDX69287 | Canola | nucleus | 23.85 | 20.26 |
| CDX73963 | Canola | nucleus | 25.38 | 19.7 |
| CDY07907 | Canola | nucleus | 25.0 | 19.58 |
| CDX68566 | Canola | nucleus | 21.54 | 17.83 |
| CDY27271 | Canola | nucleus | 25.38 | 17.69 |
| CDX72208 | Canola | nucleus | 25.0 | 17.66 |
| CDY20494 | Canola | nucleus | 24.23 | 17.12 |
| CDX74825 | Canola | nucleus | 25.0 | 16.21 |
| CDY43567 | Canola | nucleus | 13.46 | 16.13 |
| CDY70901 | Canola | nucleus | 13.46 | 12.24 |
| CDY70773 | Canola | nucleus | 13.46 | 12.24 |
| CDX83108 | Canola | cytosol | 0.77 | 5.13 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.2.1 | GO:A0A078GYN3 | UniProt:A0A078GYN3 | EnsemblPlants:CDY30264 | ProteinID:CDY30264 |
| ProteinID:CDY30264.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | EnsemblPlantsGene:GSBRNA2T00044905001 |
| InterPro:Homeobox-like_sf | InterPro:IPR017930 | InterPro:Myb_dom | PFAM:PF00249 | PFscan:PS51294 | PANTHER:PTHR10641 |
| PANTHER:PTHR10641:SF473 | InterPro:SANT/Myb | SMART:SM00717 | SUPFAM:SSF46689 | UniParc:UPI0004EDF07C | SEG:seg |
Description
BnaC04g31750DBnaC04g31750D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GYN3]
Coordinates
chrLK032251:-:153602..154749
Molecular Weight (calculated)
29944.8 Da
IEP (calculated)
10.475
GRAVY (calculated)
-0.747
Length
260 amino acids
Sequence
(BLAST)
(BLAST)
001: MMHQENKKKH LSKVCTRGHW KPSEDFKLQE LVTVFGPKKW NHIARKMQGR TGKSCRLRWF NQLDPRIIKS AFSEEEEEKL LAVHRTFGNK WSLIAKLFPG
101: RTDNAVKNHW HILMARKLRK QSISYSKSRK RQTPSPDEIA PLNLLPSFNL FPGFVGGEST EFKNYSWKMP KEESANLRDQ FLLEEYCSMR MSMQYLGHHH
201: HQHGFSTLPA DSVELHTRYL SNSQPSSSSP PTSALSTSGA ENTMTTKPPR FIDFLGVGAS
101: RTDNAVKNHW HILMARKLRK QSISYSKSRK RQTPSPDEIA PLNLLPSFNL FPGFVGGEST EFKNYSWKMP KEESANLRDQ FLLEEYCSMR MSMQYLGHHH
201: HQHGFSTLPA DSVELHTRYL SNSQPSSSSP PTSALSTSGA ENTMTTKPPR FIDFLGVGAS
001: MKMDFSCFQE YPFEFHCRGT TFNGFRENNA VSETVEEFCN KRRMQKKSDD LKTKKKKKQS VSRVCSRGHW RISEDTQLME LVSVYGPQNW NHIAESMQGR
101: TGKSCRLRWF NQLDPRINKR AFSDEEEERL LAAHRAFGNK WAMIAKLFNG RTDNALKNHW HVLMARKMRQ QSSSYVQRFN GSAHESNTDH KIFNLSPGNV
201: DDDEDVNLKK CSWEMLKEGT TNLKAQYLQE EYSSSRMPMQ GPHHHYSTFP ADSLALTLHV SIQEPSSSSS LSLPSSSTTG EHTMVTRYFE TIKPPAFIDF
301: LGVGH
101: TGKSCRLRWF NQLDPRINKR AFSDEEEERL LAAHRAFGNK WAMIAKLFNG RTDNALKNHW HVLMARKMRQ QSSSYVQRFN GSAHESNTDH KIFNLSPGNV
201: DDDEDVNLKK CSWEMLKEGT TNLKAQYLQE EYSSSRMPMQ GPHHHYSTFP ADSLALTLHV SIQEPSSSSS LSLPSSSTTG EHTMVTRYFE TIKPPAFIDF
301: LGVGH
Arabidopsis Description
MYB110Myb domain protein 110 [Source:UniProtKB/TrEMBL;Acc:F4J1R5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.