Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3B01G217100.1 | Wheat | nucleus | 94.7 | 97.12 |
| TraesCS3A01G187800.1 | Wheat | nucleus | 95.95 | 94.77 |
| HORVU3Hr1G038700.2 | Barley | nucleus | 91.59 | 89.09 |
| Os01t0274800-01 | Rice | nucleus | 57.32 | 69.43 |
| EES02758 | Sorghum | nucleus | 62.31 | 66.01 |
| Zm00001d008251_P002 | Maize | nucleus | 61.06 | 65.55 |
| Zm00001d040423_P001 | Maize | nucleus | 60.75 | 65.44 |
| EES02759 | Sorghum | nucleus | 51.09 | 58.16 |
| GSMUA_Achr6P15900_001 | Banana | nucleus | 40.81 | 47.64 |
| Zm00001d040426_P001 | Maize | nucleus | 40.19 | 46.4 |
| Bra039036.1-P | Field mustard | nucleus | 27.73 | 46.11 |
| GSMUA_Achr9P04990_001 | Banana | nucleus | 42.06 | 44.7 |
| GSMUA_Achr9P17000_001 | Banana | nucleus | 42.06 | 44.41 |
| GSMUA_Achr10P... | Banana | nucleus | 42.06 | 44.41 |
| GSMUA_Achr5P27750_001 | Banana | nucleus | 34.27 | 43.65 |
| GSMUA_Achr3P09490_001 | Banana | nucleus | 42.06 | 42.32 |
| GSMUA_Achr10P... | Banana | nucleus | 41.43 | 41.43 |
| TraesCS4D01G102100.1 | Wheat | nucleus | 34.27 | 39.71 |
| GSMUA_Achr6P32250_001 | Banana | nucleus | 42.68 | 39.6 |
| TraesCS4D01G052600.1 | Wheat | nucleus | 30.53 | 39.2 |
| AT5G39700.1 | Thale cress | nucleus | 23.05 | 38.95 |
| CDY44415 | Canola | nucleus | 31.15 | 38.31 |
| Bra025652.1-P | Field mustard | nucleus | 29.91 | 37.07 |
| CDY30264 | Canola | nucleus | 28.66 | 35.38 |
| CDY67808 | Canola | nucleus | 17.45 | 35.22 |
| Bra033078.1-P | Field mustard | nucleus | 31.15 | 34.97 |
| CDY20004 | Canola | nucleus | 31.15 | 34.84 |
| TraesCS3D01G432300.2 | Wheat | nucleus | 38.01 | 34.46 |
| CDY66025 | Canola | nucleus | 30.53 | 34.03 |
| AT3G29020.2 | Thale cress | nucleus | 31.46 | 33.11 |
| CDY66170 | Canola | nucleus | 31.15 | 31.85 |
| GSMUA_Achr11P... | Banana | endoplasmic reticulum, golgi | 36.76 | 29.95 |
| CDX74436 | Canola | nucleus | 29.59 | 26.32 |
| TraesCS6D01G162900.1 | Wheat | nucleus | 23.68 | 25.59 |
| TraesCS4D01G297900.1 | Wheat | nucleus | 20.56 | 25.48 |
| TraesCS7D01G515000.1 | Wheat | nucleus | 22.74 | 24.5 |
| TraesCS7D01G515100.1 | Wheat | nucleus | 22.43 | 24.49 |
| TraesCS5D01G164600.1 | Wheat | nucleus | 24.3 | 22.74 |
| TraesCS7D01G514800.1 | Wheat | nucleus | 24.3 | 21.79 |
| TraesCS1D01G225200.1 | Wheat | nucleus | 19.0 | 20.07 |
| TraesCS3D01G358400.1 | Wheat | nucleus | 23.68 | 16.2 |
Protein Annotations
| EnsemblPlants:TraesCS3D01G191400.1 | EnsemblPlantsGene:TraesCS3D01G191400 | Gene3D:1.10.10.60 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0005488 | InterPro:Homeobox-like_sf | InterPro:IPR017930 | InterPro:Myb_dom | InterPro:SANT/Myb | PANTHER:PTHR10641 |
| PANTHER:PTHR10641:SF473 | PFAM:PF00249 | PFscan:PS51294 | SEG:seg | SMART:SM00717 | SUPFAM:SSF46689 |
| TIGR:cd00167 | MapMan:15.5.2.1 | : | : | : | : |
Description
No Description!
Coordinates
chr3D:-:180469659..180471317
Molecular Weight (calculated)
35372.0 Da
IEP (calculated)
8.610
GRAVY (calculated)
-0.764
Length
321 amino acids
Sequence
(BLAST)
(BLAST)
001: MAREMNGYFS HPPPPPPVPA PYQEEAAADV DDAEDGSGGQ GKLCSRGHWR PAEDARLKEL VGQYGPQNWN LIAEKLDGRS GKSCRLRWFN QLDPRINRRA
101: FTEEEEDRLM AAHRAYGNKW ALIARLFPGR TDNAVKNHWH VLMARRQREQ SGAFRRRTKP ASSSSSSIAP APHYPGVFLQ HQHQHQHHYQ HHGASPIPMP
201: LQPFAMGVAI ATGVYSKAAT ATASRAYSGG ESDESASTCT TDLSLSSGSA AVPCFYHHQG YDMAPQAHAV TQAFSPSARS AFSAPSSSSA RQQQRRQQQH
301: EEQDGDKLSL PFFDFLGVGS T
101: FTEEEEDRLM AAHRAYGNKW ALIARLFPGR TDNAVKNHWH VLMARRQREQ SGAFRRRTKP ASSSSSSIAP APHYPGVFLQ HQHQHQHHYQ HHGASPIPMP
201: LQPFAMGVAI ATGVYSKAAT ATASRAYSGG ESDESASTCT TDLSLSSGSA AVPCFYHHQG YDMAPQAHAV TQAFSPSARS AFSAPSSSSA RQQQRRQQQH
301: EEQDGDKLSL PFFDFLGVGS T
001: MMFKVIFNIC SSPPMRMEMV HADVASLSIT PCFPSSLSSS SHHHYNQQQH CIMSEDQHHS MDQTTSSDYF SLNIDNAQHL RSYYTSHREE DMNPNLSDYS
101: NCNKKDTTVY RSCGHSSKAS VSRGHWRPAE DTKLKELVAV YGPQNWNLIA EKLQGRSGKS CRLRWFNQLD PRINRRAFTE EEEERLMQAH RLYGNKWAMI
201: ARLFPGRTDN SVKNHWHVIM ARKFREQSSS YRRRKTMVSL KPLINPNPHI FNDFDPTRLA LTHLASSDHK QLMLPVPCFP GYDHENESPL MVDMFETQMM
301: VGDYIAWTQE ATTFDFLNQT GKSEIFERIN EEKKPPFFDF LGLGTV
101: NCNKKDTTVY RSCGHSSKAS VSRGHWRPAE DTKLKELVAV YGPQNWNLIA EKLQGRSGKS CRLRWFNQLD PRINRRAFTE EEEERLMQAH RLYGNKWAMI
201: ARLFPGRTDN SVKNHWHVIM ARKFREQSSS YRRRKTMVSL KPLINPNPHI FNDFDPTRLA LTHLASSDHK QLMLPVPCFP GYDHENESPL MVDMFETQMM
301: VGDYIAWTQE ATTFDFLNQT GKSEIFERIN EEKKPPFFDF LGLGTV
Arabidopsis Description
MYB105myb domain protein 105 [Source:TAIR;Acc:AT1G69560]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.