Factsheet for TraesCS7D01G514800.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

plastid 1
nucleus 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus
iPSORT:	plastid
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7D01G515000.1	Wheat	nucleus	75.7	90.94
TraesCS7B01G443800.1	Wheat	nucleus	72.91	88.47
TraesCS7D01G515100.1	Wheat	nucleus	70.67	86.05
HORVU7Hr1G116750.3	Barley	nucleus	69.27	84.35
Zm00001d046632_P001	Maize	nucleus	57.54	67.76
EER90085	Sorghum	nucleus	57.26	65.5
TraesCS6D01G162900.1	Wheat	nucleus	53.91	64.98
Zm00001d036768_P001	Maize	nucleus	55.59	64.61
CDX83109	Canola	nucleus	21.51	47.53
CDY43567	Canola	nucleus	23.74	39.17
TraesCS5D01G164600.1	Wheat	nucleus	37.15	38.78
TraesCS4D01G297900.1	Wheat	nucleus	26.26	36.29
TraesCS1D01G225200.1	Wheat	nucleus	28.49	33.55
TraesCS4D01G052600.1	Wheat	nucleus	18.44	26.4
TraesCS4D01G102100.1	Wheat	nucleus	20.11	25.99
TraesCS3D01G191400.1	Wheat	nucleus	21.79	24.3
TraesCS3D01G358400.1	Wheat	nucleus	27.37	20.9
TraesCS3D01G432300.2	Wheat	nucleus	18.16	18.36
CDX83108	Canola	cytosol	1.12	10.26

Protein Annotations

EnsemblPlants:TraesCS7D01G514800.1	EnsemblPlantsGene:TraesCS7D01G514800	Gene3D:1.10.10.60	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0005488	InterPro:Homeobox-like_sf	InterPro:IPR017930	InterPro:Myb_dom	InterPro:SANT/Myb	PANTHER:PTHR10641
PANTHER:PTHR10641:SF896	PFAM:PF00249	PFscan:PS51294	SEG:seg	SMART:SM00717	SUPFAM:SSF46689
TIGR:cd00167	MapMan:15.5.2.1	:	:	:	:

Description

No Description!

Coordinates

chr7D:-:615558565..615559641

Molecular Weight (calculated)

38856.6 Da

IEP (calculated)

7.965

GRAVY (calculated)

-0.534

Length

358 amino acids

Sequence
(BLAST)

001: MQLDGASCGQ LCLPATSPAV PAYKYYTHLI SFPRQPPPPL AATHNPFNRL PIPVCISGPS SSKRAMEGCD RIRGPWSPEE DSALRQLVER HGARNWTAIG
101: RGVPGRSGKS CRLRWCNQLS PGVERRPFTA EEDAVIARAH ARLGNRWAAI ARLLRGRTDN AVKNHWNCSL KRRLGDLGAD GVAEGELEER PCKRASVTPE
201: STSGSDRSDL SHGGAFGLGQ VYRPVARAGG FEPADCAMSQ RHEEEEEQED PFTSLSLSLP GTDAHGFHFH HDSSHSHFHQ PSVSSSPPPA PAFTTAPPAS
301: SYPFSPAFAA AMQEMIHDEV RRYISGVSCG VNLPSMPQLV DGVMRAAAER AGEVSRMR

Best Arabidopsis Sequence Match ( AT2G23290.1 )
(BLAST)

001: MSGSTRKEMD RIKGPWSPEE DDLLQSLVQK HGPRNWSLIS KSIPGRSGKS CRLRWCNQLS PEVEHRGFTA EEDDTIILAH ARFGNKWATI ARLLNGRTDN
101: AIKNHWNSTL KRKCSGGGGG GEEGQSCDFG GNGGYDGNLT DEKPLKRRAS GGGGVVVVTA LSPTGSDVSE QSQSSGSVLP VSSSCHVFKP TARAGGVVIE
201: SSSPEEEEKD PMTCLRLSLP WVNESTTPPE LFPVKREEEE EKEREISGLG GDFMTVVQEM IKTEVRSYMA DLQLGNGGGA GGGASSCMVQ GTNGRNVGFR
301: EFIGLGRIE

Arabidopsis Description

AtMYB70At2g23280 [Source:UniProtKB/TrEMBL;Acc:O22179]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.