Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
Predictors | GFP | MS/MS | Papers | ||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
TraesCS1B01G236900.1 | Wheat | nucleus | 94.41 | 94.72 |
TraesCS1A01G223600.1 | Wheat | nucleus | 96.71 | 88.82 |
HORVU1Hr1G060030.1 | Barley | nucleus | 83.22 | 75.75 |
EES18041 | Sorghum | nucleus | 49.34 | 42.02 |
TraesCS4D01G297900.1 | Wheat | nucleus | 35.53 | 41.7 |
Os05t0350900-01 | Rice | nucleus | 28.29 | 40.76 |
CDX83109 | Canola | nucleus | 21.71 | 40.74 |
Zm00001d037994_P001 | Maize | nucleus | 44.08 | 36.31 |
TraesCS7D01G515100.1 | Wheat | nucleus | 34.21 | 35.37 |
TraesCS7D01G515000.1 | Wheat | nucleus | 32.89 | 33.56 |
TraesCS6D01G162900.1 | Wheat | nucleus | 32.57 | 33.33 |
TraesCS5D01G164600.1 | Wheat | nucleus | 33.88 | 30.03 |
CDY43567 | Canola | nucleus | 21.38 | 29.95 |
Zm00001d037999_P001 | Maize | nucleus | 27.3 | 28.52 |
TraesCS7D01G514800.1 | Wheat | nucleus | 33.55 | 28.49 |
Zm00001d037998_P001 | Maize | nucleus | 26.64 | 25.23 |
TraesCS4D01G052600.1 | Wheat | nucleus | 19.08 | 23.2 |
TraesCS4D01G102100.1 | Wheat | nucleus | 19.08 | 20.94 |
TraesCS3D01G191400.1 | Wheat | nucleus | 20.07 | 19.0 |
TraesCS3D01G358400.1 | Wheat | nucleus | 26.64 | 17.27 |
TraesCS3D01G432300.2 | Wheat | nucleus | 18.42 | 15.82 |
CDX83108 | Canola | cytosol | 1.32 | 10.26 |
Protein Annotations
EnsemblPlants:TraesCS1D01G225200.1 | EnsemblPlantsGene:TraesCS1D01G225200 | Gene3D:1.10.10.60 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
GO:GO:0005488 | InterPro:Homeobox-like_sf | InterPro:IPR017930 | InterPro:Myb_dom | InterPro:SANT/Myb | PANTHER:PTHR10641 |
PANTHER:PTHR10641:SF907 | PFAM:PF00249 | PFscan:PS51294 | SEG:seg | SMART:SM00717 | SUPFAM:SSF46689 |
TIGR:cd00167 | MapMan:15.5.2.1 | : | : | : | : |
Description
No Description!
Coordinates
chr1D:+:313849794..313850708
Molecular Weight (calculated)
32144.6 Da
IEP (calculated)
7.607
GRAVY (calculated)
-0.605
Length
304 amino acids
Sequence
(BLAST)
(BLAST)
001: MPDGGGGSDG AGTGAGRIKG SWSPEEDELL RDAVARHGAR NWTVISAEIP GRTGKSCRLR WCNQLSPGVH RRAFTPDEDR LIFDLHSKHG NKWATIARKL
101: VGRTDNSVKN HWNSTLRKRR RAAAAAATAG NAAGGPVFAP AAAMSFQSVD LTKGGEDDYD DDDDSDGSVE PPANAKRPRV DVPPAVKVDD QAPPPDPPTS
201: LSLSLPGTGV GAVTPPAPPA PVPAPAPVKE AWMESARAML EQNPWFMEAM KRMVEDEVRR QMGSVCSIMA SLGRAGAAAA TLPTARVDRA ETHPAGGRDQ
301: RTDG
101: VGRTDNSVKN HWNSTLRKRR RAAAAAATAG NAAGGPVFAP AAAMSFQSVD LTKGGEDDYD DDDDSDGSVE PPANAKRPRV DVPPAVKVDD QAPPPDPPTS
201: LSLSLPGTGV GAVTPPAPPA PVPAPAPVKE AWMESARAML EQNPWFMEAM KRMVEDEVRR QMGSVCSIMA SLGRAGAAAA TLPTARVDRA ETHPAGGRDQ
301: RTDG
001: MADRVKGPWS QEEDEQLRRM VEKYGPRNWS AISKSIPGRS GKSCRLRWCN QLSPEVEHRP FSPEEDETIV TARAQFGNKW ATIARLLNGR TDNAVKNHWN
101: STLKRKCSGG VAVTTVTETE EDQDRPKKRR SVSFDSAFAP VDTGLYMSPE SPNGIDVSDS STIPSPSSPV AQLFKPMPIS GGFTVVPQPL PVEMSSSSED
201: PPTSLSLSLP GAENTSSSHN NNNNALMFPR FESQMKINVE ERGEGRRGEF MTVVQEMIKA EVRSYMAEMQ KTSGGFVVGG LYESGGNGGF RDCGVITPKV
301: E
101: STLKRKCSGG VAVTTVTETE EDQDRPKKRR SVSFDSAFAP VDTGLYMSPE SPNGIDVSDS STIPSPSSPV AQLFKPMPIS GGFTVVPQPL PVEMSSSSED
201: PPTSLSLSLP GAENTSSSHN NNNNALMFPR FESQMKINVE ERGEGRRGEF MTVVQEMIKA EVRSYMAEMQ KTSGGFVVGG LYESGGNGGF RDCGVITPKV
301: E
Arabidopsis Description
MYB77Transcription factor MYB77 [Source:UniProtKB/Swiss-Prot;Acc:Q9SN12]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.