Factsheet for Zm00001d037998_P001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d037999_P001	Maize	nucleus	79.13	87.29
CDX83109	Canola	nucleus	19.0	37.65
EES18041	Sorghum	nucleus	32.4	29.13
Zm00001d015614_P001	Maize	nucleus	25.86	27.3
TraesCS1B01G236900.1	Wheat	nucleus	25.23	26.73
TraesCS1D01G225200.1	Wheat	nucleus	25.23	26.64
Zm00001d041935_P001	Maize	nucleus	21.81	26.52
Zm00001d005300_P001	Maize	nucleus	23.36	26.32
Zm00001d046632_P001	Maize	nucleus	24.92	26.32
Zm00001d036768_P001	Maize	nucleus	24.61	25.65
Zm00001d037994_P001	Maize	nucleus	28.35	24.66
TraesCS1A01G223600.1	Wheat	nucleus	25.23	24.47
HORVU1Hr1G060030.1	Barley	nucleus	25.23	24.25
Zm00001d004681_P001	Maize	nucleus	14.33	24.08
Zm00001d019712_P001	Maize	nucleus	23.68	22.03
Zm00001d041818_P001	Maize	nucleus	14.64	20.89
CDY43567	Canola	nucleus	14.02	20.74
Zm00001d040423_P001	Maize	nucleus	17.76	19.13
Zm00001d033815_P001	Maize	nucleus	14.64	18.95
Zm00001d013399_P001	Maize	nucleus	14.02	18.75
Zm00001d008251_P002	Maize	nucleus	17.45	18.73
Zm00001d040426_P001	Maize	nucleus	16.2	18.7
Zm00001d012379_P001	Maize	nucleus	23.05	18.45
Os05t0350900-01	Rice	nucleus	11.21	17.06
Zm00001d049079_P001	Maize	nucleus	14.64	16.97
Zm00001d040428_P001	Maize	nucleus	14.95	16.96
Zm00001d032194_P002	Maize	nucleus, plastid	16.82	14.14
CDX83108	Canola	cytosol	0.93	7.69

Protein Annotations

Gene3D:1.10.10.60	EntrezGene:100382333	MapMan:15.5.2.1	ProteinID:AQK85449.1	EMBL:BT063950	UniProt:C0P6N1
GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0005488	InterPro:Homeobox-like_sf	InterPro:IPR017930
EMBL:KJ727506	InterPro:Myb_dom	PFAM:PF00249	PFscan:PS51294	PANTHER:PTHR10641	PANTHER:PTHR10641:SF907
InterPro:SANT/Myb	SMART:SM00717	SUPFAM:SSF46689	UniParc:UPI0001948E48	EnsemblPlantsGene:Zm00001d037998	EnsemblPlants:Zm00001d037998_P001
EnsemblPlants:Zm00001d037998_T001	SEG:seg	:	:	:	:

Description

MYB-transcription factor 93Transcription factor MYB44

Coordinates

chr6:+:144731260..144732225

Molecular Weight (calculated)

33995.7 Da

IEP (calculated)

4.942

GRAVY (calculated)

-0.408

Length

321 amino acids

Sequence
(BLAST)

001: MEGGDGCGSS AAASGSGRVT RRWTPEEDDL LRRAVARHGP RKWPELSVDI PGRSGRSCHR RWVQHLSPGL ERRAFTPEED AVIVAAQAMY GNKWTTIARM
101: LPGRTRTDIS IKNRWNSALQ QHCRAATASA NTAGCALPLR PATTAPVPIP DLMYLNKKLA AAEASLPFPR LEPKDDEDDE DMDETGEDED MNELGDDGSS
201: EVFPPVPAVP LTLTLSLSSG VHGTLASQST FASAATLASA ATLASQSTLA SQSTFASAAA TAGSAMTMRS NLGQDPWLVP ALRLIVSDEV QRKMQEMPQV
301: TAPASRSSAD AADGSAANGQ D

Best Arabidopsis Sequence Match ( AT4G37260.1 )
(BLAST)

001: MSNPTRKNME RIKGPWSPEE DDLLQRLVQK HGPRNWSLIS KSIPGRSGKS CRLRWCNQLS PEVEHRAFSQ EEDETIIRAH ARFGNKWATI SRLLNGRTDN
101: AIKNHWNSTL KRKCSVEGQS CDFGGNGGYD GNLGEEQPLK RTASGGGGVS TGLYMSPGSP SGSDVSEQSS GGAHVFKPTV RSEVTASSSG EDPPTYLSLS
201: LPWTDETVRV NEPVQLNQNT VMDGGYTAEL FPVRKEEQVE VEEEEAKGIS GGFGGEFMTV VQEMIRTEVR SYMADLQRGN VGGSSSGGGG GGSCMPQSVN
301: SRRVGFREFI VNQIGIGKME

Arabidopsis Description

MYB73MYB73 [Source:UniProtKB/TrEMBL;Acc:A0A178V4E7]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.