Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra037004.1-P | Field mustard | nucleus | 98.34 | 98.34 |
| CDX72405 | Canola | nucleus | 93.36 | 93.36 |
| CDY21728 | Canola | nucleus | 29.88 | 45.86 |
| CDY35992 | Canola | nucleus | 29.46 | 45.22 |
| CDX83880 | Canola | nucleus | 30.29 | 40.11 |
| CDX96475 | Canola | nucleus | 37.76 | 39.91 |
| CDX72988 | Canola | nucleus | 37.34 | 39.82 |
| CDY71713 | Canola | nucleus | 37.76 | 39.57 |
| CDX82074 | Canola | nucleus | 37.76 | 39.06 |
| CDY58312 | Canola | nucleus | 37.76 | 38.89 |
| CDX75353 | Canola | nucleus | 39.42 | 37.85 |
| CDX68977 | Canola | nucleus | 39.0 | 37.6 |
| CDY28302 | Canola | nucleus | 39.0 | 37.45 |
| CDX81853 | Canola | nucleus | 37.76 | 36.84 |
| CDX96742 | Canola | nucleus | 36.1 | 35.95 |
| CDY21727 | Canola | nucleus | 36.93 | 35.46 |
| KRH15916 | Soybean | nucleus | 33.2 | 33.06 |
| CDX83109 | Canola | nucleus | 20.75 | 30.86 |
| CDY44415 | Canola | nucleus | 32.37 | 29.89 |
| CDY30264 | Canola | nucleus | 30.71 | 28.46 |
| CDX78761 | Canola | nucleus | 36.1 | 27.8 |
| CDX70776 | Canola | nucleus | 35.68 | 27.48 |
| CDY67808 | Canola | nucleus | 17.84 | 27.04 |
| CDX85443 | Canola | nucleus | 34.44 | 27.04 |
| CDY02687 | Canola | nucleus | 34.44 | 26.77 |
| CDY20004 | Canola | nucleus | 31.54 | 26.48 |
| CDY66025 | Canola | nucleus | 31.54 | 26.39 |
| CDY16884 | Canola | nucleus | 33.61 | 25.96 |
| CDY40941 | Canola | nucleus | 34.44 | 25.94 |
| CDY69058 | Canola | nucleus | 28.22 | 25.76 |
| CDY07345 | Canola | nucleus | 31.54 | 25.5 |
| CDX95921 | Canola | nucleus | 33.61 | 25.31 |
| CDY67868 | Canola | nucleus | 31.12 | 25.17 |
| CDY38460 | Canola | nucleus | 33.61 | 25.0 |
| CDY50737 | Canola | nucleus | 34.85 | 24.42 |
| CDY66170 | Canola | nucleus | 31.54 | 24.2 |
| CDY12830 | Canola | nucleus | 24.9 | 23.72 |
| CDY46444 | Canola | nucleus | 34.44 | 23.51 |
| CDY44993 | Canola | nucleus | 34.02 | 23.23 |
| CDY01420 | Canola | nucleus | 24.9 | 22.81 |
| CDY30608 | Canola | nucleus | 24.9 | 22.64 |
| CDX72621 | Canola | nucleus | 24.48 | 22.26 |
| CDY29542 | Canola | nucleus | 24.07 | 21.89 |
| CDY57355 | Canola | nucleus | 24.9 | 21.58 |
| CDY22442 | Canola | nucleus | 24.48 | 21.45 |
| CDY23023 | Canola | nucleus | 25.73 | 21.38 |
| CDY02098 | Canola | nucleus | 25.73 | 21.16 |
| CDX89554 | Canola | nucleus | 25.31 | 20.82 |
| CDX75635 | Canola | nucleus | 25.73 | 20.74 |
| CDY38933 | Canola | nucleus | 24.9 | 20.55 |
| CDX74436 | Canola | nucleus | 30.71 | 20.5 |
| CDY44045 | Canola | nucleus | 24.07 | 20.35 |
| CDX69287 | Canola | nucleus | 25.73 | 20.26 |
| CDX73963 | Canola | nucleus | 24.9 | 17.91 |
| CDX68566 | Canola | nucleus | 23.24 | 17.83 |
| CDY07907 | Canola | nucleus | 24.48 | 17.77 |
| CDY20494 | Canola | nucleus | 24.9 | 16.3 |
| CDY43567 | Canola | nucleus | 14.52 | 16.13 |
| CDY27271 | Canola | nucleus | 24.9 | 16.09 |
| CDX72208 | Canola | nucleus | 24.48 | 16.03 |
| CDX74825 | Canola | nucleus | 25.73 | 15.46 |
| CDY70773 | Canola | nucleus | 14.11 | 11.89 |
| CDY70901 | Canola | nucleus | 14.11 | 11.89 |
| CDX83108 | Canola | cytosol | 0.83 | 5.13 |
Protein Annotations
| EnsemblPlants:CDY46114 | EnsemblPlantsGene:GSBRNA2T00083274001 | Gene3D:1.10.10.60 | GO:A0A078I9V1 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0005488 | InterPro:Homeobox-like_sf | InterPro:IPR017930 | InterPro:Myb_dom | InterPro:SANT/Myb |
| PANTHER:PTHR10641 | PANTHER:PTHR10641:SF941 | PFAM:PF13921 | PFscan:PS51294 | ProteinID:CDY46114 | ProteinID:CDY46114.1 |
| SMART:SM00717 | SUPFAM:SSF46689 | UniParc:UPI0004EECF58 | UniProt:A0A078I9V1 | MapMan:15.5.2.1 | : |
Description
BnaA03g52540DBnaA03g52540D protein [Source:UniProtKB/TrEMBL;Acc:A0A078I9V1]
Coordinates
chrLK032650:+:103599..104433
Molecular Weight (calculated)
27765.6 Da
IEP (calculated)
10.371
GRAVY (calculated)
-1.048
Length
241 amino acids
Sequence
(BLAST)
(BLAST)
001: MSRGSNSCDN KKTKGHRKGL WKPFEDDKLK QLVEQYGPHN WNNIGQLLSG RTGQSCRQRW CNQLAPNINK GPFTKEEEER LLEAHRIHGS RWAYIAKLFP
101: GRTDNALKNH YRVTMKRRKR IGLSSTPTSP FNQIRSPIFP LPRLSHNLYP FQRYQMHNSR GPWPYTSASA PRSDQFGSSW ISNAQQETDL YRRKSNELVV
201: HQAATPDHEK NSSGEDGTSM IDHGEKRDVP FFDFLGVGLD S
101: GRTDNALKNH YRVTMKRRKR IGLSSTPTSP FNQIRSPIFP LPRLSHNLYP FQRYQMHNSR GPWPYTSASA PRSDQFGSSW ISNAQQETDL YRRKSNELVV
201: HQAATPDHEK NSSGEDGTSM IDHGEKRDVP FFDFLGVGLD S
001: MEMSRGSNSF DNKKPSCQRG HWRPVEDDNL RQLVEQYGPK NWNFIAQHLY GRSGKSCRLR WYNQLDPNIT KKPFTEEEEE RLLKAHRIQG NRWASIARLF
101: PGRTDNAVKN HFHVIMARRK RENFSSTATS TFNQTWHTVL SPSSSLTRLN RSHFGLWRYR KDKSCGLWPY SFVSPPTNGQ FGSSSVSNVH HEIYLERRKS
201: KELVDPQNYT FHAATPDHKM TSNEDGPSMG DDGEKNDVTF IDFLGVGLAS
101: PGRTDNAVKN HFHVIMARRK RENFSSTATS TFNQTWHTVL SPSSSLTRLN RSHFGLWRYR KDKSCGLWPY SFVSPPTNGQ FGSSSVSNVH HEIYLERRKS
201: KELVDPQNYT FHAATPDHKM TSNEDGPSMG DDGEKNDVTF IDFLGVGLAS
Arabidopsis Description
ATMYB69MYB transcription factor [Source:UniProtKB/TrEMBL;Acc:Q9SZC2]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.