Factsheet for Os06t0637500-02

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, nucleus, cytosol

Predictor Summary:

nucleus 4
cytosol 1
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os02t0187700-00	Rice	nucleus	66.88	69.1
CDX83109	Canola	nucleus	24.76	47.53
Os09t0106700-01	Rice	nucleus	47.27	46.08
CDY43567	Canola	nucleus	29.9	42.86
Os01t0977300-01	Rice	nucleus	31.19	38.8
Os08t0450900-00	Rice	nucleus	22.51	35.0
Os03t0720800-01	Rice	nucleus	22.19	28.16
Os01t0274800-01	Rice	nucleus	21.86	25.66
Os11t0207600-00	Rice	nucleus, plastid	21.54	25.09
Os08t0435700-00	Rice	nucleus	20.26	24.42
Os05t0350900-01	Rice	nucleus	15.43	22.75
Os01t0850400-01	Rice	nucleus	29.9	22.52
CDX83108	Canola	cytosol	1.61	12.82
Os08t0435725-00	Rice	cytosol	0.96	3.0

Protein Annotations

Gene3D:1.10.10.60	MapMan:15.5.2.1	EntrezGene:4341607	EMBL:AK105817	EMBL:AK121564	ProteinID:BAD37513.1
ProteinID:BAF20062.1	ProteinID:BAS98775.1	GO:GO:0000981	GO:GO:0001135	GO:GO:0003674	GO:GO:0003676
GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0006139	GO:GO:0006357	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	GO:GO:0030154	GO:GO:0043565	GO:GO:0044212	InterPro:Homeobox-like_sf	InterPro:IPR017930
InterPro:Myb_dom	EnsemblPlantsGene:Os06g0637500	EnsemblPlants:Os06t0637500-02	PFAM:PF00249	PFscan:PS51294	PANTHER:PTHR10641
PANTHER:PTHR10641:SF896	UniProt:Q67WF6	InterPro:SANT/Myb	SMART:SM00717	SUPFAM:SSF46689	UniParc:UPI00004262ED
RefSeq:XP_015641187.1	SEG:seg	:	:	:	:

Description

R2R3-MYBSimilar to MYB transcription factor R2R3 type. (Os06t0637500-02)

Coordinates

chr6:-:25899446..25900813

Molecular Weight (calculated)

33379.2 Da

IEP (calculated)

8.096

GRAVY (calculated)

-0.539

Length

311 amino acids

Sequence
(BLAST)

001: MGGGGGVEAD CDRIRGPWSP EEDEALRRLV ERHGARNWTA IGREIPGRSG KSCRLRWCNQ LSPQVERRPF TAEEDATILR AHARLGNRWA AIARLLQGRT
101: DNAVKNHWNC SLKRKLAVAT TTTTTTTGAA AAPGVVADAA ELVERPCKRF SPTPDSPSGS GSGSDRSDLS HGGGFGQIFR PVARTGAFEP VDCAISRRQE
201: EDPFTSLSLS LPGTDQRFNH DSAHSHFQEL PSSPSPPPPP PPAAAASTTQ YPFTPEFAAA MQEMIRAEVH KYMASVGVRA GCGDAGGADL HMPQLVEGVM
301: RAAAERVGRM H

Best Arabidopsis Sequence Match ( AT3G50060.1 )
(BLAST)

001: MADRVKGPWS QEEDEQLRRM VEKYGPRNWS AISKSIPGRS GKSCRLRWCN QLSPEVEHRP FSPEEDETIV TARAQFGNKW ATIARLLNGR TDNAVKNHWN
101: STLKRKCSGG VAVTTVTETE EDQDRPKKRR SVSFDSAFAP VDTGLYMSPE SPNGIDVSDS STIPSPSSPV AQLFKPMPIS GGFTVVPQPL PVEMSSSSED
201: PPTSLSLSLP GAENTSSSHN NNNNALMFPR FESQMKINVE ERGEGRRGEF MTVVQEMIKA EVRSYMAEMQ KTSGGFVVGG LYESGGNGGF RDCGVITPKV
301: E

Arabidopsis Description

MYB77Transcription factor MYB77 [Source:UniProtKB/Swiss-Prot;Acc:Q9SN12]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.