Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 2
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4D01G254600.1 | Wheat | cytosol | 99.09 | 98.19 |
| HORVU4Hr1G069390.1 | Barley | cytosol | 99.09 | 98.19 |
| TraesCS4A01G049900.1 | Wheat | cytosol | 98.18 | 97.29 |
| Os03t0207300-01 | Rice | cytosol | 91.79 | 90.96 |
| GSMUA_Achr6P16850_001 | Banana | cytosol | 87.84 | 86.79 |
| GSMUA_Achr10P... | Banana | cytosol | 87.54 | 86.49 |
| VIT_18s0001g09320.t01 | Wine grape | cytosol | 87.23 | 86.19 |
| Solyc03g044140.2.1 | Tomato | cytosol, nucleus | 87.23 | 86.19 |
| CDY57359 | Canola | cytosol | 86.93 | 86.14 |
| Bra029986.1-P | Field mustard | cytosol | 86.02 | 86.02 |
| CDX83104 | Canola | cytosol | 86.02 | 86.02 |
| KRH28388 | Soybean | cytosol | 86.93 | 85.89 |
| CDY30613 | Canola | cytosol | 86.93 | 85.89 |
| CDY57680 | Canola | cytosol | 86.63 | 85.59 |
| KRH77093 | Soybean | nucleus | 86.63 | 85.59 |
| Solyc02g092640.2.1 | Tomato | cytosol, nucleus | 86.32 | 85.29 |
| PGSC0003DMT400064191 | Potato | cytosol | 86.32 | 85.29 |
| CDY70654 | Canola | cytosol | 44.38 | 84.88 |
| AT2G23080.1 | Thale cress | cytosol | 84.19 | 83.18 |
| TraesCS5B01G404900.1 | Wheat | cytosol, mitochondrion | 86.32 | 74.54 |
| Bra036806.1-P | Field mustard | cytosol | 75.38 | 73.59 |
| Bra036044.1-P | Field mustard | plasma membrane | 86.93 | 73.52 |
| KRH04471 | Soybean | nucleus | 87.84 | 72.61 |
| TraesCS2B01G278700.2 | Wheat | cytosol | 82.67 | 71.96 |
| CDX98044 | Canola | cytosol | 34.95 | 71.88 |
| VIT_07s0129g00410.t01 | Wine grape | golgi, plasma membrane | 87.23 | 70.86 |
| AT3G50000.1 | Thale cress | golgi, plasma membrane, vacuole | 86.63 | 70.72 |
| KRH58068 | Soybean | mitochondrion | 87.23 | 69.83 |
| AT5G67380.1 | Thale cress | golgi, plasma membrane | 86.63 | 69.68 |
| Bra031829.1-P | Field mustard | cytosol | 57.14 | 68.61 |
| CDY71648 | Canola | plastid | 29.79 | 60.87 |
| TraesCS5B01G405700.1 | Wheat | mitochondrion, plastid | 74.47 | 59.32 |
| CDY67469 | Canola | vacuole | 51.98 | 58.36 |
| CDY15289 | Canola | vacuole | 48.02 | 57.25 |
| CDY29766 | Canola | golgi, plasma membrane | 59.88 | 55.65 |
| CDY25489 | Canola | golgi, plasma membrane | 55.02 | 37.24 |
| TraesCS1B01G142300.1 | Wheat | cytosol | 30.4 | 24.88 |
| TraesCS3B01G201800.2 | Wheat | cytosol | 30.4 | 24.63 |
| TraesCS1B01G095200.2 | Wheat | cytosol | 29.48 | 23.66 |
| TraesCS5B01G529300.1 | Wheat | cytosol | 30.4 | 23.47 |
| TraesCS5B01G511800.1 | Wheat | cytosol | 28.88 | 23.23 |
| TraesCS1B01G196700.3 | Wheat | cytosol | 30.09 | 20.84 |
| TraesCS5B01G230700.1 | Wheat | endoplasmic reticulum, extracellular, plastid | 5.47 | 15.38 |
| TraesCS1B01G361800.1 | Wheat | endoplasmic reticulum, extracellular, plastid | 4.86 | 13.91 |
Protein Annotations
| Gene3D:1.10.510.10 | MapMan:18.4.3.9.1 | Gene3D:3.30.200.20 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0004672 | GO:GO:0005488 | GO:GO:0005524 | GO:GO:0006464 | GO:GO:0006468 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016301 | GO:GO:0016740 | GO:GO:0019538 | InterPro:IPR000719 |
| InterPro:Kinase-like_dom_sf | PFAM:PF00069 | ScanProsite:PS00107 | ScanProsite:PS00108 | PFscan:PS50011 | PANTHER:PTHR24054 |
| PANTHER:PTHR24054:SF35 | InterPro:Prot_kinase_dom | InterPro:Protein_kinase_ATP_BS | SMART:SM00220 | SUPFAM:SSF56112 | InterPro:Ser/Thr_kinase_AS |
| EnsemblPlantsGene:TraesCS4B01G254800 | EnsemblPlants:TraesCS4B01G254800.1 | TIGR:cd14132 | SEG:seg | : | : |
Description
No Description!
Coordinates
chr4B:+:520209568..520214702
Molecular Weight (calculated)
38882.5 Da
IEP (calculated)
7.668
GRAVY (calculated)
-0.475
Length
329 amino acids
Sequence
(BLAST)
(BLAST)
001: MSTARVYADV NVRRPREYWD YEALSVQWGE QDDYEVVRKV GRGKYSEVFE GINVTNDERC VIKILKPVKK KKIKREIKIL QNLCGGTNII KLLNVVRDQQ
101: SKTPSLVFEY VNSTDFKVLY PTFTDYDIRF YIYELLKALD YCHSQGIMHR DVKPHNVMID HELRLIDWGL AEFYFPEKEY NVRVASRYFK GPELLVDFQG
201: YDYSLDMWSL GCMFAGMIFR KEPFFYGHDN HDQLFKIAKV LGTDELNAYL GKYRIVLDPQ LEALIGRHNR KPWSKFVNAE NRHLVSEEAI DFLDKLLRFD
301: HQDRLTAEEA MAHAYFHQVR AAENSRGRT
101: SKTPSLVFEY VNSTDFKVLY PTFTDYDIRF YIYELLKALD YCHSQGIMHR DVKPHNVMID HELRLIDWGL AEFYFPEKEY NVRVASRYFK GPELLVDFQG
201: YDYSLDMWSL GCMFAGMIFR KEPFFYGHDN HDQLFKIAKV LGTDELNAYL GKYRIVLDPQ LEALIGRHNR KPWSKFVNAE NRHLVSEEAI DFLDKLLRFD
301: HQDRLTAEEA MAHAYFHQVR AAENSRGRT
001: MALRPCTGFT ISSLRNASAA NNNLFSLLSF SSSSPAKRNL LLSSLQDNLR RFASSASLYR QHLRNQQQQH QQQQQSRVKE KSETLAQKIG KSIRRAGAPS
101: KARVYADVNV VRPKDYWDYE SLAVQWGVQD DYEVVRKVGR GKYSEVFEGI HATDNEKCVI KILKPVKKKK IKREIKILQN LCGGPNIVKL LDIVRDQQSK
201: TPSLIFEHVN NKDFKVLYPT LSDYDVRYYI FELLKALDFC HSRGIMHRDV KPHNVMIDHE QRKLRLIDWG LAEFYHPGKE YNVRVASRYF KGPELLVDLQ
301: DYDYSLDLWS LGCMFAGMIF RKEPFFYGHD NYDQLVKIAK VLGTDELNAY LNKYRIELDP NLTSLVGRHS RKPWTKFINS ENQHLAVPEA VDFVDKLLRY
401: DHQERPTAKE AMAHPYFYPI RNAESSRTPR SQ
101: KARVYADVNV VRPKDYWDYE SLAVQWGVQD DYEVVRKVGR GKYSEVFEGI HATDNEKCVI KILKPVKKKK IKREIKILQN LCGGPNIVKL LDIVRDQQSK
201: TPSLIFEHVN NKDFKVLYPT LSDYDVRYYI FELLKALDFC HSRGIMHRDV KPHNVMIDHE QRKLRLIDWG LAEFYHPGKE YNVRVASRYF KGPELLVDLQ
301: DYDYSLDLWS LGCMFAGMIF RKEPFFYGHD NYDQLVKIAK VLGTDELNAY LNKYRIELDP NLTSLVGRHS RKPWTKFINS ENQHLAVPEA VDFVDKLLRY
401: DHQERPTAKE AMAHPYFYPI RNAESSRTPR SQ
Arabidopsis Description
CKA4Casein kinase II subunit alpha-4, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:O64816]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.