Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, cytosol
Predictor Summary:
Predictor Summary:
- plastid 2
- cytosol 2
- mitochondrion 3
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5A01G400100.1 | Wheat | cytosol, mitochondrion | 98.95 | 98.95 |
| HORVU5Hr1G097230.1 | Barley | cytosol, plastid | 98.95 | 98.69 |
| TraesCS5D01G410000.1 | Wheat | plastid | 98.69 | 98.69 |
| Solyc03g044140.2.1 | Tomato | cytosol, nucleus | 80.84 | 92.49 |
| KRH28388 | Soybean | cytosol | 80.84 | 92.49 |
| KRH77093 | Soybean | nucleus | 80.58 | 92.19 |
| GSMUA_Achr5P01690_001 | Banana | cytosol | 80.58 | 92.19 |
| CDY70654 | Canola | cytosol | 41.47 | 91.86 |
| Solyc02g092640.2.1 | Tomato | cytosol, nucleus | 79.79 | 91.29 |
| PGSC0003DMT400064191 | Potato | cytosol | 79.79 | 91.29 |
| CDY30613 | Canola | cytosol | 79.53 | 90.99 |
| CDY57359 | Canola | cytosol | 79.27 | 90.96 |
| Bra029986.1-P | Field mustard | cytosol | 78.48 | 90.88 |
| CDX83104 | Canola | cytosol | 78.48 | 90.88 |
| CDY57680 | Canola | cytosol | 79.27 | 90.69 |
| VIT_18s0001g09320.t01 | Wine grape | cytosol | 78.74 | 90.09 |
| AT2G23080.1 | Thale cress | cytosol | 77.95 | 89.19 |
| EER90840 | Sorghum | plastid | 89.5 | 88.57 |
| Zm00001d034125_P002 | Maize | mitochondrion, plastid | 88.98 | 88.05 |
| Zm00001d013217_P001 | Maize | cytosol | 87.14 | 86.68 |
| TraesCS4B01G254800.1 | Wheat | cytosol | 74.54 | 86.32 |
| KRH04471 | Soybean | nucleus | 83.2 | 79.65 |
| TraesCS2B01G278700.2 | Wheat | cytosol | 78.22 | 78.84 |
| Bra036806.1-P | Field mustard | cytosol | 69.55 | 78.64 |
| Bra036044.1-P | Field mustard | plasma membrane | 79.53 | 77.89 |
| CDX98044 | Canola | cytosol | 32.55 | 77.5 |
| VIT_07s0129g00410.t01 | Wine grape | golgi, plasma membrane | 82.15 | 77.28 |
| KRH58068 | Soybean | mitochondrion | 82.68 | 76.64 |
| AT3G50000.1 | Thale cress | golgi, plasma membrane, vacuole | 80.84 | 76.43 |
| AT5G67380.1 | Thale cress | golgi, plasma membrane | 81.1 | 75.55 |
| Bra031829.1-P | Field mustard | cytosol | 51.97 | 72.26 |
| CDY71648 | Canola | plastid | 28.08 | 66.46 |
| TraesCS5B01G405700.1 | Wheat | mitochondrion, plastid | 69.03 | 63.68 |
| CDY67469 | Canola | vacuole | 48.56 | 63.14 |
| CDY15289 | Canola | vacuole | 44.62 | 61.59 |
| CDY29766 | Canola | golgi, plasma membrane | 56.69 | 61.02 |
| Os03t0762000-01 | Rice | plastid | 23.1 | 60.69 |
| CDY25489 | Canola | golgi, plasma membrane | 51.18 | 40.12 |
| TraesCS3B01G201800.2 | Wheat | cytosol | 27.82 | 26.11 |
| TraesCS1B01G142300.1 | Wheat | cytosol | 27.03 | 25.62 |
| TraesCS5B01G511800.1 | Wheat | cytosol | 26.25 | 24.45 |
| TraesCS5B01G529300.1 | Wheat | cytosol | 26.77 | 23.94 |
| TraesCS1B01G095200.2 | Wheat | cytosol | 25.72 | 23.9 |
| TraesCS1B01G196700.3 | Wheat | cytosol | 27.03 | 21.68 |
| TraesCS5B01G230700.1 | Wheat | endoplasmic reticulum, extracellular, plastid | 4.46 | 14.53 |
| TraesCS1B01G361800.1 | Wheat | endoplasmic reticulum, extracellular, plastid | 3.94 | 13.04 |
Protein Annotations
| Gene3D:1.10.510.10 | MapMan:18.4.3.9.1 | Gene3D:3.30.200.20 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0004672 | GO:GO:0005488 | GO:GO:0005524 | GO:GO:0006464 | GO:GO:0006468 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016301 | GO:GO:0016740 | GO:GO:0019538 | InterPro:IPR000719 |
| InterPro:Kinase-like_dom_sf | PFAM:PF00069 | ScanProsite:PS00107 | ScanProsite:PS00108 | PFscan:PS50011 | PANTHER:PTHR24054 |
| PANTHER:PTHR24054:SF33 | InterPro:Prot_kinase_dom | InterPro:Protein_kinase_ATP_BS | SMART:SM00220 | SUPFAM:SSF56112 | InterPro:Ser/Thr_kinase_AS |
| TMHMM:TMhelix | EnsemblPlantsGene:TraesCS5B01G404900 | EnsemblPlants:TraesCS5B01G404900.1 | TIGR:cd14132 | SEG:seg | : |
Description
No Description!
Coordinates
chr5B:-:580686553..580692831
Molecular Weight (calculated)
43956.9 Da
IEP (calculated)
9.307
GRAVY (calculated)
-0.424
Length
381 amino acids
Sequence
(BLAST)
(BLAST)
001: MSDAPPRKRP PASSVVRAAA AVVVAALASS FVALSPRCAP AAAGSRPSMS KARVYTDVNV VRPKEYWDYE ALTVQWGEQD DYEVVRKVGR GKYSEVFEGF
101: SVNNSEKCVI KILKPVKKKK IKREVKILQN LCGGPNIIKL LDIVRDQHSK TPSLIFEYVN NTDFKVLYPT LTDYDIRYYL YELLKALDHC HSQGIMHRDV
201: KPHNVMIDHD LRKLRLIDWG LAEFYHPGKE YNVRVASRYF KGPELLVDLQ DYDYSLDMWS LGCMFAGMIF RKEPFFYGHD NHDQLVKIAK VLGTDSLNAY
301: LKKYHLELDP QLEHLVGRHS RKPWSKFINA DNQHLVSPEA IDFLDKLLRY DHQDRLTARE AMAHPYFLQV RAAENSRARP Q
101: SVNNSEKCVI KILKPVKKKK IKREVKILQN LCGGPNIIKL LDIVRDQHSK TPSLIFEYVN NTDFKVLYPT LTDYDIRYYL YELLKALDHC HSQGIMHRDV
201: KPHNVMIDHD LRKLRLIDWG LAEFYHPGKE YNVRVASRYF KGPELLVDLQ DYDYSLDMWS LGCMFAGMIF RKEPFFYGHD NHDQLVKIAK VLGTDSLNAY
301: LKKYHLELDP QLEHLVGRHS RKPWSKFINA DNQHLVSPEA IDFLDKLLRY DHQDRLTARE AMAHPYFLQV RAAENSRARP Q
001: MHLIFFFSYF LRRYLLLLCA ILILRAPLAH SLIPPLTCVN TGTVESDVTG IRFDRCLDTD SLAKISLSTV MSKARVYTDV NVIRPKDYWD YESLNVQWGE
101: QDDYEVVRKV GRGKYSEVFE GINMNNNEKC IIKILKPVKK KKIRREIKIL QNLCGGPNIV KLLDVVRDQH SKTPSLIFEY VNSTDFKVLY PTLTDYDIRY
201: YIYELLKALD FCHSQGIMHR DVKPHNVMID HELRKLRLID WGLAEFYHPG KEYNVRVASR YFKGPELLVD LQDYDYSLDM WSLGCMFAGM IFRKEPFFYG
301: HDNQDQLVKI AKVLGTDELN AYLNKYQLEL DTQLEALVGR HSRKPWSKFI NADNRHLVSP EAIDYLDKLL RYDHQDRLTA KEAMAHPYFA QVRAAESSRM
401: RTQ
101: QDDYEVVRKV GRGKYSEVFE GINMNNNEKC IIKILKPVKK KKIRREIKIL QNLCGGPNIV KLLDVVRDQH SKTPSLIFEY VNSTDFKVLY PTLTDYDIRY
201: YIYELLKALD FCHSQGIMHR DVKPHNVMID HELRKLRLID WGLAEFYHPG KEYNVRVASR YFKGPELLVD LQDYDYSLDM WSLGCMFAGM IFRKEPFFYG
301: HDNQDQLVKI AKVLGTDELN AYLNKYQLEL DTQLEALVGR HSRKPWSKFI NADNRHLVSP EAIDYLDKLL RYDHQDRLTA KEAMAHPYFA QVRAAESSRM
401: RTQ
Arabidopsis Description
CKA2Casein kinase II subunit alpha-2 [Source:UniProtKB/Swiss-Prot;Acc:Q08466]
SUBAcon: [plasma membrane,golgi,vacuole]
SUBAcon: [plasma membrane,golgi,vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.