Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 8
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1D01G138100.2 | Wheat | plastid | 96.4 | 96.4 |
| TraesCS1B01G155700.3 | Wheat | plastid | 95.07 | 96.1 |
| HORVU1Hr1G035960.19 | Barley | cytosol, plastid | 93.87 | 87.8 |
| KRH01182 | Soybean | cytosol | 27.43 | 77.44 |
| CDY34695 | Canola | plastid | 14.11 | 74.13 |
| Os10t0437600-00 | Rice | plastid | 73.24 | 73.43 |
| OQU91730 | Sorghum | cytosol | 65.38 | 71.78 |
| Zm00001d014150_P005 | Maize | plastid | 73.1 | 70.93 |
| Bra021486.1-P | Field mustard | endoplasmic reticulum | 18.91 | 67.3 |
| CDY43274 | Canola | plastid | 55.79 | 60.03 |
| CDY37538 | Canola | plastid | 53.66 | 59.53 |
| TraesCS6A01G307800.1 | Wheat | plastid | 51.93 | 57.69 |
| GSMUA_Achr6P23190_001 | Banana | cytosol | 55.39 | 57.14 |
| KRH18473 | Soybean | plastid | 56.19 | 54.38 |
| KRG93537 | Soybean | plastid | 55.39 | 53.75 |
| VIT_14s0108g00940.t01 | Wine grape | plastid | 56.99 | 53.5 |
| PGSC0003DMT400003356 | Potato | cytosol | 54.46 | 53.32 |
| AT3G01180.1 | Thale cress | plastid | 56.19 | 53.28 |
| Solyc02g088000.2.1 | Tomato | nucleus, plastid | 54.33 | 53.12 |
| Bra039138.1-P | Field mustard | plastid | 54.19 | 52.79 |
| GSMUA_Achr1P24650_001 | Banana | mitochondrion | 54.59 | 52.03 |
| KRH15937 | Soybean | plastid | 8.39 | 48.46 |
| CDY55806 | Canola | plastid | 35.55 | 48.28 |
| TraesCS7A01G189000.1 | Wheat | plastid | 49.93 | 47.11 |
| TraesCS7A01G120300.1 | Wheat | plastid | 33.56 | 39.13 |
| Bra021487.1-P | Field mustard | cytosol | 19.31 | 39.08 |
| TraesCS7A01G070100.1 | Wheat | plastid | 28.5 | 35.43 |
| CDY34693 | Canola | endoplasmic reticulum, golgi | 18.77 | 35.43 |
| TraesCS4A01G418200.1 | Wheat | plastid | 28.5 | 35.37 |
| TraesCS2A01G373600.1 | Wheat | plastid | 28.1 | 35.23 |
| TraesCS1A01G353300.1 | Wheat | cytosol | 20.91 | 22.89 |
| TraesCS2A01G468800.1 | Wheat | plastid | 23.3 | 13.39 |
| TraesCS1A01G091500.1 | Wheat | plastid | 21.97 | 10.13 |
Protein Annotations
| EnsemblPlants:TraesCS1A01G137200.1 | EnsemblPlantsGene:TraesCS1A01G137200 | Gene3D:3.40.50.2000 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004373 |
| GO:GO:0016740 | HAMAP:MF_00484 | InterPro:GS/SS | InterPro:Glyco_trans_1 | InterPro:Starch_synth_cat_dom | KEGG:00500+2.4.1.21 |
| PANTHER:PTHR12526 | PANTHER:PTHR12526:SF542 | PFAM:PF00534 | PFAM:PF08323 | SEG:seg | SUPFAM:SSF53756 |
| TIGR:cd03791 | TIGRFAMs:TIGR02095 | MapMan:3.2.2.4.2 | : | : | : |
Description
No Description!
Coordinates
chr1A:+:221695822..221707703
Molecular Weight (calculated)
83656.0 Da
IEP (calculated)
6.572
GRAVY (calculated)
-0.348
Length
751 amino acids
Sequence
(BLAST)
(BLAST)
001: MAATSSSFFA PPPAALLRHG ASPRPTAAAS PSSSFRCHGR LQRPSVRVPR RRPAIPAAAR PVRFCVNGVY GWPAVLRGWT KRGSRKCLCA AGAHDDAVNQ
101: VGEDADHDDD DVRVSNEALR ATIRKSREVL AMHRDLLDQI SEKKKLISVI EASSIHNGQE PFSGSPFSRS DAVSEGEEIG YDLQMYLDRR SQKSEIRSTH
201: GESISGQHEY YGSLEDKLSY TDVNGSYSKD YEKGHSVTEE IDDNSSSSAA VDVMNIILVA AECAPWSKTG GLGDVAGALP KALSKRGHRV MAIVPMYGNY
301: EEPRQIGEPK RYQVAGQDME VKYYHAYIDG VDFVFIDNPI FHNVESEIYG GDRTVNFFLQ DILKRMILLC KAAVEAPWCV PCGGFCYGDG NLVFIANDWH
401: TALLPVYLKA YYRDNGFMIY ARSVLVIHNI AHQGRGPLDD FSYLDLPSNY LDLFKHHDPF GGDHLNIFAA GIKAADRLLT VSHGYAWELK TPEGGWGLHG
501: IINESDWKFQ GIVNGIDTTD WNPRCDVHLK SDGYSNYSLV TVETGKAQCK AALQKELGLP VRGDVPVIAF IGRLDNQKGV DLIAEAMPWI AGQDVQVILL
601: GTGRQDLEDT LRRLESQHYD RVRGWVGFSV RLAHRMTAGT DILLMPSRFE PCGLNQLYAM MYGTVPVVHA VGGLRDTVQH YNPYEEAGLG WTFENAEANR
701: MIDALGHCLN TYRNYKSSWE GLRRRGMMQD LSWDTAAKRY EEVLVAAKYQ W
101: VGEDADHDDD DVRVSNEALR ATIRKSREVL AMHRDLLDQI SEKKKLISVI EASSIHNGQE PFSGSPFSRS DAVSEGEEIG YDLQMYLDRR SQKSEIRSTH
201: GESISGQHEY YGSLEDKLSY TDVNGSYSKD YEKGHSVTEE IDDNSSSSAA VDVMNIILVA AECAPWSKTG GLGDVAGALP KALSKRGHRV MAIVPMYGNY
301: EEPRQIGEPK RYQVAGQDME VKYYHAYIDG VDFVFIDNPI FHNVESEIYG GDRTVNFFLQ DILKRMILLC KAAVEAPWCV PCGGFCYGDG NLVFIANDWH
401: TALLPVYLKA YYRDNGFMIY ARSVLVIHNI AHQGRGPLDD FSYLDLPSNY LDLFKHHDPF GGDHLNIFAA GIKAADRLLT VSHGYAWELK TPEGGWGLHG
501: IINESDWKFQ GIVNGIDTTD WNPRCDVHLK SDGYSNYSLV TVETGKAQCK AALQKELGLP VRGDVPVIAF IGRLDNQKGV DLIAEAMPWI AGQDVQVILL
601: GTGRQDLEDT LRRLESQHYD RVRGWVGFSV RLAHRMTAGT DILLMPSRFE PCGLNQLYAM MYGTVPVVHA VGGLRDTVQH YNPYEEAGLG WTFENAEANR
701: MIDALGHCLN TYRNYKSSWE GLRRRGMMQD LSWDTAAKRY EEVLVAAKYQ W
001: MATVTASSNF VSRTSLFNNH GASSCSDVAQ ITLKGQSLTH CGLRSFNMVD NLQRRSQAKP VSAKSSKRSS KVKTAGKIVC EKGMSVIFIG AEVGPWSKTG
101: GLGDVLGGLP PALAARGHRV MTICPRYDQY KDAWDTCVVV QIKVGDKVEN VRFFHCYKRG VDRVFVDHPI FLAKVVGKTG SKIYGPITGV DYNDNQLRFS
201: LLCQAALEAP QVLNLNSSKY FSGPYGEDVV FVANDWHTAL LPCYLKSMYQ SRGVYMNAKV VFCIHNIAYQ GRFAFDDYSL LNLPISFKSS FDFMDGYEKP
301: VKGRKINWMK AAILEAHRVL TVSPYYAQEL ISGVDRGVEL HKYLRMKTVS GIINGMDVQE WNPSTDKYID IKYDITTVTD AKPLIKEALQ AAVGLPVDRD
401: VPVIGFIGRL EEQKGSDILV EAISKFMGLN VQMVILGTGK KKMEAQILEL EEKFPGKAVG VAKFNVPLAH MITAGADFII VPSRFEPCGL IQLHAMRYGT
501: VPIVASTGGL VDTVKDGYTG FHIGRFNVKC EVVDPDDVIA TAKAVTRAVA VYGTSAMQEM VKNCMDQDFS WKGPARLWEK VLLSLNVAGS EAGTEGEEIA
601: PLAKENVATP
101: GLGDVLGGLP PALAARGHRV MTICPRYDQY KDAWDTCVVV QIKVGDKVEN VRFFHCYKRG VDRVFVDHPI FLAKVVGKTG SKIYGPITGV DYNDNQLRFS
201: LLCQAALEAP QVLNLNSSKY FSGPYGEDVV FVANDWHTAL LPCYLKSMYQ SRGVYMNAKV VFCIHNIAYQ GRFAFDDYSL LNLPISFKSS FDFMDGYEKP
301: VKGRKINWMK AAILEAHRVL TVSPYYAQEL ISGVDRGVEL HKYLRMKTVS GIINGMDVQE WNPSTDKYID IKYDITTVTD AKPLIKEALQ AAVGLPVDRD
401: VPVIGFIGRL EEQKGSDILV EAISKFMGLN VQMVILGTGK KKMEAQILEL EEKFPGKAVG VAKFNVPLAH MITAGADFII VPSRFEPCGL IQLHAMRYGT
501: VPIVASTGGL VDTVKDGYTG FHIGRFNVKC EVVDPDDVIA TAKAVTRAVA VYGTSAMQEM VKNCMDQDFS WKGPARLWEK VLLSLNVAGS EAGTEGEEIA
601: PLAKENVATP
Arabidopsis Description
GBSS1Granule-bound starch synthase 1, chloroplastic/amyloplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9MAQ0]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.