Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 8
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6B01G336400.1 | Wheat | plastid | 93.05 | 93.32 |
| TraesCS6D01G287000.1 | Wheat | plastid | 91.42 | 93.21 |
| HORVU6Hr1G075950.4 | Barley | plastid | 92.46 | 92.59 |
| KRH01182 | Soybean | cytosol | 30.77 | 78.2 |
| Os02t0744700-01 | Rice | nucleus | 75.74 | 75.63 |
| Zm00001d052263_P001 | Maize | plastid | 76.04 | 73.43 |
| Zm00001d018033_P001 | Maize | plastid | 74.41 | 73.11 |
| EES05532 | Sorghum | plastid | 75.15 | 72.16 |
| CDY34695 | Canola | plastid | 15.24 | 72.03 |
| Bra021486.1-P | Field mustard | endoplasmic reticulum | 21.15 | 67.77 |
| CDY43274 | Canola | plastid | 61.98 | 60.03 |
| CDY37538 | Canola | plastid | 59.62 | 59.53 |
| TraesCS7A01G189000.1 | Wheat | plastid | 64.35 | 54.65 |
| KRG93537 | Soybean | plastid | 60.95 | 53.23 |
| KRH18473 | Soybean | plastid | 60.95 | 53.09 |
| Bra039138.1-P | Field mustard | plastid | 59.91 | 52.53 |
| AT3G01180.1 | Thale cress | plastid | 61.54 | 52.53 |
| Solyc02g088000.2.1 | Tomato | nucleus, plastid | 59.17 | 52.08 |
| TraesCS1A01G137200.1 | Wheat | plastid | 57.69 | 51.93 |
| PGSC0003DMT400003356 | Potato | cytosol | 58.88 | 51.89 |
| VIT_14s0108g00940.t01 | Wine grape | plastid | 60.21 | 50.88 |
| KRH15937 | Soybean | plastid | 9.47 | 49.23 |
| CDY55806 | Canola | plastid | 38.17 | 46.65 |
| Bra021487.1-P | Field mustard | cytosol | 22.04 | 40.16 |
| TraesCS7A01G120300.1 | Wheat | plastid | 36.98 | 38.82 |
| CDY34693 | Canola | endoplasmic reticulum, golgi | 20.71 | 35.18 |
| TraesCS7A01G070100.1 | Wheat | plastid | 30.92 | 34.6 |
| TraesCS2A01G373600.1 | Wheat | plastid | 30.33 | 34.22 |
| TraesCS4A01G418200.1 | Wheat | plastid | 30.62 | 34.21 |
| TraesCS1A01G353300.1 | Wheat | cytosol | 24.11 | 23.76 |
| TraesCS2A01G468800.1 | Wheat | plastid | 25.74 | 13.31 |
| TraesCS1A01G091500.1 | Wheat | plastid | 24.7 | 10.25 |
Protein Annotations
| EnsemblPlants:TraesCS6A01G307800.1 | EnsemblPlantsGene:TraesCS6A01G307800 | Gene3D:3.40.50.2000 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004373 |
| GO:GO:0016740 | HAMAP:MF_00484 | InterPro:GS/SS | InterPro:Starch_synth_cat_dom | KEGG:00500+2.4.1.21 | PANTHER:PTHR12526 |
| PANTHER:PTHR12526:SF371 | PFAM:PF08323 | PFAM:PF13692 | SEG:seg | SignalP:SignalP-noTM | SUPFAM:SSF53756 |
| TIGR:cd03791 | TIGRFAMs:TIGR02095 | MapMan:3.2.2.4.2 | : | : | : |
Description
No Description!
Coordinates
chr6A:+:542254722..542259078
Molecular Weight (calculated)
73978.7 Da
IEP (calculated)
6.741
GRAVY (calculated)
-0.239
Length
676 amino acids
Sequence
(BLAST)
(BLAST)
001: MLGHIASSSA AFLLLVASSS SSRRWRSSSP RSFGAAGTRL HWERRGFSRD GSVPCRRVSA AAAVAGGEEG AGKAIAGEGS RQAASGQRGK LEAAENEDAV
101: SQKSVASAPR PDSTVAEQHW AAGSRSEVDP SAPVSAAASG YWKDVVVAEQ VGAKVDAGGD AAKVWSSPVD SENMGSAPLA GPNVMNVIVV ASECAPFCKT
201: GGLGDVVGAL PKALARRGHR VMVVIPKYGD YGEARDLGVR KRYKVAGQDS EVSYFHSYID GVDFVFLEAP PFRHRHNDIY GGERPDVLKR MILFCKAAVE
301: VPWYAPCGGT IYGDGNLVFI ANDWHTALLP VYLKAYYRDN GLMQYTRSVL VIHNIAHQGR GPVDDFNIMD LPEHYMDHFK LYDPLGGQHN NVFAAGLKMA
401: DRVVTVSHGY MWELKTMEGG WGLHDIINQN DWKLDGIVNG IDTAEWNPAV DVHLHSDDYT NYTRDTLDIG KRQCKAALQR ELGLQVRDDV PLIGFIGRLD
501: HQKGVDIIAA AMPWIAQQDV QLVMLGTGRP DLEDMLRRFE GEHRDKVRGW VGFSVRMAHR ITAGADVLLM PSLFEPCGLN QLYAMAYGTV PVVHAVGGLR
601: DTVAPFDPFG GTGLGWTFDR ADAGRMIDAL GHCLNTYWNY KESWRGLQVR GMSQDLSWDR AAELYENVLV KAKYQW
101: SQKSVASAPR PDSTVAEQHW AAGSRSEVDP SAPVSAAASG YWKDVVVAEQ VGAKVDAGGD AAKVWSSPVD SENMGSAPLA GPNVMNVIVV ASECAPFCKT
201: GGLGDVVGAL PKALARRGHR VMVVIPKYGD YGEARDLGVR KRYKVAGQDS EVSYFHSYID GVDFVFLEAP PFRHRHNDIY GGERPDVLKR MILFCKAAVE
301: VPWYAPCGGT IYGDGNLVFI ANDWHTALLP VYLKAYYRDN GLMQYTRSVL VIHNIAHQGR GPVDDFNIMD LPEHYMDHFK LYDPLGGQHN NVFAAGLKMA
401: DRVVTVSHGY MWELKTMEGG WGLHDIINQN DWKLDGIVNG IDTAEWNPAV DVHLHSDDYT NYTRDTLDIG KRQCKAALQR ELGLQVRDDV PLIGFIGRLD
501: HQKGVDIIAA AMPWIAQQDV QLVMLGTGRP DLEDMLRRFE GEHRDKVRGW VGFSVRMAHR ITAGADVLLM PSLFEPCGLN QLYAMAYGTV PVVHAVGGLR
601: DTVAPFDPFG GTGLGWTFDR ADAGRMIDAL GHCLNTYWNY KESWRGLQVR GMSQDLSWDR AAELYENVLV KAKYQW
001: MASVAESSFP LLCQIKTQRR INSSTLRHSR VSYHDLPSGS LSFRSRSFVL GHRCKCVSRV EASGSDDDEP EDALQATIDK SKKVLAMQRN LLHQIAERRK
101: LVSSIKESTP DLDDAKASSK QESASSVNAN TDATKKEIMD GDANGSVSPS TYGKSSLSKE PEAKTFSPST ESLKNRKQSS ASVISSSPVT SPQKPSDVAT
201: NGKPWSSVVA SSVDPPYKPS SVMTSPEKTS DPVTSPGKPS KSRAGAFWSD PLPSYLTKAP QTSTMKTEKY VEKTPDVASS ETNEPGKDEE KPPPLAGANV
301: MNVILVAAEC APFSKTGGLG DVAGALPKSL ARRGHRVMVV VPRYAEYAEA KDLGVRKRYK VAGQDMEVMY FHAFIDGVDF VFIDSPEFRH LSNNIYGGNR
401: LDILKRMVLF CKAAVEVPWY VPCGGVCYGD GNLAFIANDW HTALLPVYLK AYYRDHGIMK YTRSVLVIHN IAHQGRGPVD DFSYVDLPSH YLDSFKLYDP
501: VGGEHFNIFA AGLKAADRVL TVSHGYSWEV KTLEGGWGLH NIINENDWKF RGIVNGIDTQ EWNPEFDTYL HSDDYTNYSL ENLHIGKPQC KAALQKELGL
601: PVRPDVPLIG FIGRLDHQKG VDLIAEAVPW MMSQDVQLVM LGTGRPDLEE VLRQMEHQYR DKARGWVGFS VKTAHRITAG ADILLMPSRF EPCGLNQLYA
701: MNYGTIPVVH AVGGLRDTVQ QFDPYSETGL GWTFDSAEAG KLIHALGNCL LTYREYKESW EGLQRRGMTQ DLSWDNAAEK YEEVLVAAKY HW
101: LVSSIKESTP DLDDAKASSK QESASSVNAN TDATKKEIMD GDANGSVSPS TYGKSSLSKE PEAKTFSPST ESLKNRKQSS ASVISSSPVT SPQKPSDVAT
201: NGKPWSSVVA SSVDPPYKPS SVMTSPEKTS DPVTSPGKPS KSRAGAFWSD PLPSYLTKAP QTSTMKTEKY VEKTPDVASS ETNEPGKDEE KPPPLAGANV
301: MNVILVAAEC APFSKTGGLG DVAGALPKSL ARRGHRVMVV VPRYAEYAEA KDLGVRKRYK VAGQDMEVMY FHAFIDGVDF VFIDSPEFRH LSNNIYGGNR
401: LDILKRMVLF CKAAVEVPWY VPCGGVCYGD GNLAFIANDW HTALLPVYLK AYYRDHGIMK YTRSVLVIHN IAHQGRGPVD DFSYVDLPSH YLDSFKLYDP
501: VGGEHFNIFA AGLKAADRVL TVSHGYSWEV KTLEGGWGLH NIINENDWKF RGIVNGIDTQ EWNPEFDTYL HSDDYTNYSL ENLHIGKPQC KAALQKELGL
601: PVRPDVPLIG FIGRLDHQKG VDLIAEAVPW MMSQDVQLVM LGTGRPDLEE VLRQMEHQYR DKARGWVGFS VKTAHRITAG ADILLMPSRF EPCGLNQLYA
701: MNYGTIPVVH AVGGLRDTVQ QFDPYSETGL GWTFDSAEAG KLIHALGNCL LTYREYKESW EGLQRRGMTQ DLSWDNAAEK YEEVLVAAKY HW
Arabidopsis Description
SS2Starch synthase, chloroplastic/amyloplastic (Fragment) [Source:UniProtKB/TrEMBL;Acc:W8QNS2]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.