Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 6
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2B01G491700.2 | Wheat | plastid | 92.58 | 94.83 |
| TraesCS2D01G468900.2 | Wheat | endoplasmic reticulum, golgi | 94.41 | 87.95 |
| HORVU2Hr1G106410.9 | Barley | cytosol | 89.14 | 87.66 |
| Os04t0624600-01 | Rice | plastid | 73.99 | 79.52 |
| KXG27148 | Sorghum | mitochondrion, plastid | 69.93 | 76.74 |
| Zm00001d026337_P013 | Maize | plastid | 69.24 | 75.99 |
| Zm00001d002256_P012 | Maize | plastid | 68.55 | 75.42 |
| GSMUA_Achr11P... | Banana | cytosol, mitochondrion, plastid | 13.24 | 74.25 |
| Bra019836.1-P | Field mustard | endoplasmic reticulum, vacuole | 27.39 | 71.46 |
| CDY31209 | Canola | plastid | 48.43 | 59.05 |
| CDY49799 | Canola | mitochondrion | 48.89 | 58.89 |
| KRH51091 | Soybean | plastid | 48.74 | 58.87 |
| CDX97980 | Canola | plastid | 49.12 | 58.85 |
| GSMUA_Achr5P00700_001 | Banana | plastid | 50.19 | 58.57 |
| KRH20852 | Soybean | plastid | 51.19 | 58.22 |
| AT1G11720.2 | Thale cress | mitochondrion, plastid | 48.66 | 58.14 |
| KRH11434 | Soybean | plastid | 51.19 | 57.38 |
| Solyc02g080570.2.1 | Tomato | nucleus, plastid | 50.65 | 53.82 |
| GSMUA_Achr11P... | Banana | plastid | 39.17 | 50.34 |
| TraesCS1A01G091500.1 | Wheat | plastid | 61.29 | 49.17 |
| Bra016818.1-P | Field mustard | cytosol | 48.58 | 48.36 |
| VIT_10s0116g01730.t01 | Wine grape | plastid | 53.48 | 45.75 |
| TraesCS1A01G353300.1 | Wheat | cytosol | 17.37 | 33.09 |
| TraesCS6A01G307800.1 | Wheat | plastid | 13.31 | 25.74 |
| TraesCS2A01G373600.1 | Wheat | plastid | 11.63 | 25.38 |
| TraesCS7A01G070100.1 | Wheat | plastid | 11.63 | 25.17 |
| TraesCS4A01G418200.1 | Wheat | plastid | 11.4 | 24.63 |
| TraesCS7A01G120300.1 | Wheat | plastid | 11.71 | 23.76 |
| TraesCS1A01G137200.1 | Wheat | plastid | 13.39 | 23.3 |
| TraesCS7A01G189000.1 | Wheat | plastid | 12.93 | 21.23 |
Protein Annotations
| KEGG:00500+2.4.1.21 | MapMan:3.2.2.4.3 | Gene3D:3.40.50.2000 | InterPro:CBM25 | ncoils:Coil | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0004373 | GO:GO:0005488 | GO:GO:0016740 | GO:GO:0030246 | GO:GO:2001070 |
| InterPro:GS/SS | InterPro:Glyco_trans_1 | HAMAP:MF_00484 | PFAM:PF00534 | PFAM:PF08323 | PFAM:PF16760 |
| PANTHER:PTHR12526 | PANTHER:PTHR12526:SF345 | SMART:SM01066 | SUPFAM:SSF53756 | InterPro:Starch_synth_cat_dom | EnsemblPlantsGene:TraesCS2A01G468800 |
| EnsemblPlants:TraesCS2A01G468800.1 | TIGR:cd03791 | SEG:seg | : | : | : |
Description
No Description!
Coordinates
chr2A:-:712573083..712581300
Molecular Weight (calculated)
147042.0 Da
IEP (calculated)
4.765
GRAVY (calculated)
-0.601
Length
1307 amino acids
Sequence
(BLAST)
(BLAST)
0001: MEMALRAQSP LCSRSRPVLL VRPAVPGLAQ PIVKCSRFAR SRLVRCMVAS SDYPKRNPRR SSAPKPKGTA SRGYAPRPST ESWTSTKKTE HSSADEDADL
0101: GTRNGTLSSE ATEQTSTAEE EYEVEFSGNV SSSVELKGVS EEEVDQKQPP ALSSTSMDVE STDESSEVDF SGNVSSSTEL KGVNEVGTEE EAGQKQPPAL
0201: ASTSMGVESV NEATEQTSTA DESSEVDFSG NVSSSVVLEV VDESETEEEA DQKQSSALAS TSMDSESIDR ELEEYRVRIS ALVGASTRGK DQSSIGFHGQ
0301: DKSVITSDEQ DISAVDVPQQ SQSVVGVTRE DPTEQTTSKN LMARKHSSSE DGVGASKDAN EEPLVAGDEL RITEDEEQRE PEMQEQVQMD VDPQALKRRL
0401: EELADENYSI GNKCFVFPQL VEADSVIDLY LNRSMSALAS EPDILIKGAF NGWRWNHFTE KLRRSELTGD WWCCKLYIPK QAYRLDFVFF NGDTVYENNS
0501: YNDFVLHIES DIDEHSFEDF LLEEKQRELE RLAAEEAERE RQAEEERRKE EERAAMEADR AQAKAEVEMT RNKLQHVLGL ASRYADNLWY IQPSTYKGGD
0601: RVRLYYNRSS RPLKHKNEIW LHGGYNNWTD GPSIVERLVK SEEKDGDWWY ANVTLPESAL VLDWVFADGS PGNASKYDNN GKQDFHAAVS KSISDDLFWV
0701: EEERRIFERL QRERTEKEDA GRRKAEITAR MKAEMKEKTM REFLLSQKHI VYTEPLEVRA GTTVDVLYNP SNTLLNGSPE VWFRCSFNRW THPSGPLPPQ
0801: KMVNAENGSH LQATVRVPLD AYMMDFVFSE SEEGGIYDNR DGMDYHIPVS DSMAKEPPMH IVHIAVEMAP IAKVGGLGDV VTSLSRAIQD LGHKVEVIFP
0901: KYDCLNLSNV KDLHCRQSFT WGGTEIKVWF GKVEGISVYF LEPQNGMFWV GCVYGRNDES RFGFFCHSAL EFLLQSGSSP DIIHCHDWSS APVAWLYKQH
1001: YVHNGLPNGR VVFTIHNLEF GVNHIGKAMA HCDKATTVSY TYSKEVSGHG SIAPHYFKFH GIRNGIDSDI WDPYNDNYIP VHYTSENVVE GKSSAKRALQ
1101: EKLGLHQTDS PLVGIISRLT AQKGIHLIKH AIYRTLERNG QVVLLGSAPD HRIQGDFSNL AAKLHGEFDG RVKLCLTYDE PLSHLIYAGA DFILVPSIFE
1201: PCGLTQLTAM RYGSIPIVRK TGGLYDTVFD VDDDKDRACE QGLEPNGFSF EGADSNGVDY ALDRAITTWY DARDWFHSLC KRVMEQDWSW NRPALDYMEL
1301: YHSARKN
0101: GTRNGTLSSE ATEQTSTAEE EYEVEFSGNV SSSVELKGVS EEEVDQKQPP ALSSTSMDVE STDESSEVDF SGNVSSSTEL KGVNEVGTEE EAGQKQPPAL
0201: ASTSMGVESV NEATEQTSTA DESSEVDFSG NVSSSVVLEV VDESETEEEA DQKQSSALAS TSMDSESIDR ELEEYRVRIS ALVGASTRGK DQSSIGFHGQ
0301: DKSVITSDEQ DISAVDVPQQ SQSVVGVTRE DPTEQTTSKN LMARKHSSSE DGVGASKDAN EEPLVAGDEL RITEDEEQRE PEMQEQVQMD VDPQALKRRL
0401: EELADENYSI GNKCFVFPQL VEADSVIDLY LNRSMSALAS EPDILIKGAF NGWRWNHFTE KLRRSELTGD WWCCKLYIPK QAYRLDFVFF NGDTVYENNS
0501: YNDFVLHIES DIDEHSFEDF LLEEKQRELE RLAAEEAERE RQAEEERRKE EERAAMEADR AQAKAEVEMT RNKLQHVLGL ASRYADNLWY IQPSTYKGGD
0601: RVRLYYNRSS RPLKHKNEIW LHGGYNNWTD GPSIVERLVK SEEKDGDWWY ANVTLPESAL VLDWVFADGS PGNASKYDNN GKQDFHAAVS KSISDDLFWV
0701: EEERRIFERL QRERTEKEDA GRRKAEITAR MKAEMKEKTM REFLLSQKHI VYTEPLEVRA GTTVDVLYNP SNTLLNGSPE VWFRCSFNRW THPSGPLPPQ
0801: KMVNAENGSH LQATVRVPLD AYMMDFVFSE SEEGGIYDNR DGMDYHIPVS DSMAKEPPMH IVHIAVEMAP IAKVGGLGDV VTSLSRAIQD LGHKVEVIFP
0901: KYDCLNLSNV KDLHCRQSFT WGGTEIKVWF GKVEGISVYF LEPQNGMFWV GCVYGRNDES RFGFFCHSAL EFLLQSGSSP DIIHCHDWSS APVAWLYKQH
1001: YVHNGLPNGR VVFTIHNLEF GVNHIGKAMA HCDKATTVSY TYSKEVSGHG SIAPHYFKFH GIRNGIDSDI WDPYNDNYIP VHYTSENVVE GKSSAKRALQ
1101: EKLGLHQTDS PLVGIISRLT AQKGIHLIKH AIYRTLERNG QVVLLGSAPD HRIQGDFSNL AAKLHGEFDG RVKLCLTYDE PLSHLIYAGA DFILVPSIFE
1201: PCGLTQLTAM RYGSIPIVRK TGGLYDTVFD VDDDKDRACE QGLEPNGFSF EGADSNGVDY ALDRAITTWY DARDWFHSLC KRVMEQDWSW NRPALDYMEL
1301: YHSARKN
0001: MEVCWQIQRP ASLRPGFQEK GRVKINTFSV GFFPRSISSI ASLESQYKSN GFLHQITASA DFSRKKQGRM AASGPKSSGP RGFGRRTTVG SAQKRTQKKN
0101: GEKDSNATST ATNEVSGISK LPAAKVDVQK QSSVVLNERN VLDRSDIEDG SDRLDKKTTD DDDLLEQKLK LERENLRRKE IETLAAENLA RGDRMFVYPV
0201: IVKPDEDIEV FLNRNLSTLN NEPDVLIMGA FNEWRWKSFT RRLEKTWIHE DWLSCLLHIP KEAYKMDFVF FNGQSVYDNN DSKDFCVEIK GGMDKVDFEN
0301: FLLEEKLREQ EKLAKEEAER ERQKEEKRRI EAQKAAIEAD RAQAKAETQK RRELLQPAIK KAVVSAENVW YIEPSDFKAE DTVKLYYNKR SGPLTNSKEL
0401: WLHGGFNNWV DGLSIVVKLV NAELKDVDPK SGNWWFAEVV VPGGALVIDW VFADGPPKGA FLYDNNGYQD FHALVPQKLP EELYWLEEEN MIFRKLQEDR
0501: RLKEEVMRAK MEKTARLKAE TKERTLKKFL LSQKDVVYTE PLEIQAGNPV TVLYNPANTV LNGKPEVWFR GSFNRWTHRL GPLPPQKMEA TDDESSHVKT
0601: TAKVPLDAYM MDFVFSEKED GGIFDNKNGL DYHLPVVGGI SKEPPLHIVH IAVEMAPIAK VGGLGDVVTS LSRAVQELNH NVDIVFPKYD CIKHNFVKDL
0701: QFNRSYHWGG TEIKVWHGKV EGLSVYFLDP QNGLFQRGCV YGCADDAGRF GFFCHAALEF LLQGGFHPDI LHCHDWSSAP VSWLFKDHYT QYGLIKTRIV
0801: FTIHNLEFGA NAIGKAMTFA DKATTVSPTY AKEVAGNSVI SAHLYKFHGI INGIDPDIWD PYNDNFIPVP YTSENVVEGK RAAKEELQNR LGLKSADFPV
0901: VGIITRLTHQ KGIHLIKHAI WRTLERNGQV VLLGSAPDPR IQNDFVNLAN QLHSSHGDRA RLVLTYDEPL SHLIYAGADF ILVPSIFEPC GLTQLIAMRY
1001: GAVPVVRKTG GLFDTVFDVD HDKERAQAQV LEPNGFSFDG ADAPGVDYAL NRAISAWYDG REWFNSLCKT VMEQDWSWNR PALEYLELYH SARK
0101: GEKDSNATST ATNEVSGISK LPAAKVDVQK QSSVVLNERN VLDRSDIEDG SDRLDKKTTD DDDLLEQKLK LERENLRRKE IETLAAENLA RGDRMFVYPV
0201: IVKPDEDIEV FLNRNLSTLN NEPDVLIMGA FNEWRWKSFT RRLEKTWIHE DWLSCLLHIP KEAYKMDFVF FNGQSVYDNN DSKDFCVEIK GGMDKVDFEN
0301: FLLEEKLREQ EKLAKEEAER ERQKEEKRRI EAQKAAIEAD RAQAKAETQK RRELLQPAIK KAVVSAENVW YIEPSDFKAE DTVKLYYNKR SGPLTNSKEL
0401: WLHGGFNNWV DGLSIVVKLV NAELKDVDPK SGNWWFAEVV VPGGALVIDW VFADGPPKGA FLYDNNGYQD FHALVPQKLP EELYWLEEEN MIFRKLQEDR
0501: RLKEEVMRAK MEKTARLKAE TKERTLKKFL LSQKDVVYTE PLEIQAGNPV TVLYNPANTV LNGKPEVWFR GSFNRWTHRL GPLPPQKMEA TDDESSHVKT
0601: TAKVPLDAYM MDFVFSEKED GGIFDNKNGL DYHLPVVGGI SKEPPLHIVH IAVEMAPIAK VGGLGDVVTS LSRAVQELNH NVDIVFPKYD CIKHNFVKDL
0701: QFNRSYHWGG TEIKVWHGKV EGLSVYFLDP QNGLFQRGCV YGCADDAGRF GFFCHAALEF LLQGGFHPDI LHCHDWSSAP VSWLFKDHYT QYGLIKTRIV
0801: FTIHNLEFGA NAIGKAMTFA DKATTVSPTY AKEVAGNSVI SAHLYKFHGI INGIDPDIWD PYNDNFIPVP YTSENVVEGK RAAKEELQNR LGLKSADFPV
0901: VGIITRLTHQ KGIHLIKHAI WRTLERNGQV VLLGSAPDPR IQNDFVNLAN QLHSSHGDRA RLVLTYDEPL SHLIYAGADF ILVPSIFEPC GLTQLIAMRY
1001: GAVPVVRKTG GLFDTVFDVD HDKERAQAQV LEPNGFSFDG ADAPGVDYAL NRAISAWYDG REWFNSLCKT VMEQDWSWNR PALEYLELYH SARK
Arabidopsis Description
ATSS3SS3 [Source:UniProtKB/TrEMBL;Acc:A0A178W4M9]
SUBAcon: [mitochondrion,plastid]
SUBAcon: [mitochondrion,plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.