Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 6
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2A01G468800.1 | Wheat | plastid | 94.83 | 92.58 |
| HORVU2Hr1G106410.9 | Barley | cytosol | 92.08 | 88.41 |
| TraesCS2D01G468900.2 | Wheat | endoplasmic reticulum, golgi | 95.06 | 86.46 |
| Os04t0624600-01 | Rice | plastid | 76.49 | 80.26 |
| KXG27148 | Sorghum | mitochondrion, plastid | 72.1 | 77.25 |
| Zm00001d026337_P013 | Maize | plastid | 71.16 | 76.24 |
| Zm00001d002256_P012 | Maize | plastid | 70.45 | 75.67 |
| GSMUA_Achr11P... | Banana | cytosol, mitochondrion, plastid | 13.71 | 75.11 |
| Bra019836.1-P | Field mustard | endoplasmic reticulum, vacuole | 28.13 | 71.66 |
| KRH51091 | Soybean | plastid | 50.0 | 58.96 |
| GSMUA_Achr5P00700_001 | Banana | plastid | 51.49 | 58.66 |
| CDY31209 | Canola | plastid | 49.14 | 58.49 |
| CDY49799 | Canola | mitochondrion | 49.69 | 58.43 |
| CDX97980 | Canola | plastid | 49.92 | 58.39 |
| KRH20852 | Soybean | plastid | 52.43 | 58.22 |
| AT1G11720.2 | Thale cress | mitochondrion, plastid | 49.53 | 57.77 |
| KRH11434 | Soybean | plastid | 52.43 | 57.38 |
| Solyc02g080570.2.1 | Tomato | nucleus, plastid | 51.96 | 53.9 |
| GSMUA_Achr11P... | Banana | plastid | 39.97 | 50.15 |
| TraesCS1B01G119300.1 | Wheat | plastid | 62.46 | 49.5 |
| Bra016818.1-P | Field mustard | cytosol | 49.37 | 47.98 |
| VIT_10s0116g01730.t01 | Wine grape | plastid | 54.39 | 45.42 |
| TraesCS1B01G368500.1 | Wheat | plastid | 20.53 | 28.7 |
| TraesCS7B01G018600.1 | Wheat | cytosol | 11.13 | 27.26 |
| TraesCS6B01G336400.1 | Wheat | plastid | 13.48 | 25.52 |
| TraesCS2B01G390700.1 | Wheat | plastid | 11.68 | 24.87 |
| TraesCS1B01G155700.3 | Wheat | plastid | 14.11 | 24.23 |
| TraesCS7B01G093800.2 | Wheat | plastid | 13.32 | 21.3 |
Protein Annotations
| KEGG:00500+2.4.1.21 | MapMan:3.2.2.4.3 | Gene3D:3.40.50.2000 | InterPro:CBM25 | ncoils:Coil | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0004373 | GO:GO:0005488 | GO:GO:0016740 | GO:GO:0030246 | GO:GO:2001070 |
| InterPro:GS/SS | InterPro:Glyco_trans_1 | HAMAP:MF_00484 | PFAM:PF00534 | PFAM:PF08323 | PFAM:PF16760 |
| PANTHER:PTHR12526 | PANTHER:PTHR12526:SF345 | SMART:SM01066 | SUPFAM:SSF53756 | InterPro:Starch_synth_cat_dom | EnsemblPlantsGene:TraesCS2B01G491700 |
| EnsemblPlants:TraesCS2B01G491700.2 | TIGR:cd03791 | SEG:seg | : | : | : |
Description
No Description!
Coordinates
chr2B:-:690026658..690034415
Molecular Weight (calculated)
143959.0 Da
IEP (calculated)
4.852
GRAVY (calculated)
-0.584
Length
1276 amino acids
Sequence
(BLAST)
(BLAST)
0001: MEMALRAQSP LCSRSRPVLL VRPASAAAVP CLAQSIVKCS RFTRSRLVRC MVASSDYPKR NPRRSSAPKP KGTASREYAP RPSAESWTST KKTEHSSADE
0101: DGDLGASNGT LSSDTAEQTS TAEEEYEVEF SGNVSSSVEL KGVNEEEVDQ KQPPALSSTS MDAESVNEAT EHTSTADESS EVDFSGNVSS SVVLEVVDES
0201: ETEEEADQKQ SSASSTSMDV ESIDRELEGY RVRISALVGA STQGQDQSII GVHEQDKSVI TSDEQDISAV DVPEQSQSVV AVTREDTTEQ TTSEQDITEA
0301: VVEEIASKNL VARKHSSSED GVGARKHANE EPLVAGDELR VTEDEEQHEP EMQEQVKMDV DPQALKRRLE ELADKNYSIG NKCFVFPELV EADSVIDLYL
0401: NRSMSALANE PDILIKGAFN GWRWNHFTEK LHRSELTGDW WCCKLYLPKQ AYRLDFVFFN GDTVYENNSY NDFVLHIESD IDEHSFEDFL LEEKQRELER
0501: LAAEEAERER QAEEERRKEE ERAAMEADRA QAKAEVETTR NKLQHVLGLA SRYVDNLWYI QPSTYKGGDR VRLYYNRSSR PLKHKNEIWL HGGYNNWTDG
0601: PSIVERLVKS EEKDGDWWYA NVTLPESALV LDWVFADGSP GNASKYDNNG KQDFHAAVSK SISDDLFWVE EERRIFERLQ RERKEKEDAC RRKAEITARM
0701: KADMKEKTMR EFLLSQKHIV YTEPLEVRAG TTVDVLYNPS NTVLNGSPEV WFRCSFNRWT HPSGPLPPQK MVNAENGSHL QATVRVPLDA YMMDFVFSES
0801: EEGGIYDNRD GMDYHIPVSD SMAKEPPMHI VHIAVEMAPI AKVGGLGDVV TSLSRAIQDL GHKVEVIFPK YDCLNLSNVK DLHCRQSFTW GGTEIKIWFG
0901: KVEGISVYFL EPQNGMFWVG CVYGKNDESR FGFFCHSALE FLLQSGSSPD IIHCHDWSSA PVAWLYKQQY VHNGLPNGRV VFTIHNLEFG VHHIGKAMAH
1001: CDKATTVSYT YSKEVSGHGS IAPHYFKFHG IRNGIDSDIW DPYNDNFIPV HYTSENVVEG KSSAKRALQE KLGLHQTDSP LVGIISRLTA QKGIHLIKHA
1101: IYRTLERNGQ VVLLGSAPDH RIQGDFSNLA AKLHGEFDGR VKLCLTYDEP LSHLIYAGAD FILVPSIFEP CGLTQLTAMR YGSIPIVRKT GGLYDTVFDV
1201: DDDKDRAREQ GLEPNGFSFE GADSNGVDYA LDRAITTWYD ARDWFHSLCK RVMEQDWSWN RPALDYMELY HSARKN
0101: DGDLGASNGT LSSDTAEQTS TAEEEYEVEF SGNVSSSVEL KGVNEEEVDQ KQPPALSSTS MDAESVNEAT EHTSTADESS EVDFSGNVSS SVVLEVVDES
0201: ETEEEADQKQ SSASSTSMDV ESIDRELEGY RVRISALVGA STQGQDQSII GVHEQDKSVI TSDEQDISAV DVPEQSQSVV AVTREDTTEQ TTSEQDITEA
0301: VVEEIASKNL VARKHSSSED GVGARKHANE EPLVAGDELR VTEDEEQHEP EMQEQVKMDV DPQALKRRLE ELADKNYSIG NKCFVFPELV EADSVIDLYL
0401: NRSMSALANE PDILIKGAFN GWRWNHFTEK LHRSELTGDW WCCKLYLPKQ AYRLDFVFFN GDTVYENNSY NDFVLHIESD IDEHSFEDFL LEEKQRELER
0501: LAAEEAERER QAEEERRKEE ERAAMEADRA QAKAEVETTR NKLQHVLGLA SRYVDNLWYI QPSTYKGGDR VRLYYNRSSR PLKHKNEIWL HGGYNNWTDG
0601: PSIVERLVKS EEKDGDWWYA NVTLPESALV LDWVFADGSP GNASKYDNNG KQDFHAAVSK SISDDLFWVE EERRIFERLQ RERKEKEDAC RRKAEITARM
0701: KADMKEKTMR EFLLSQKHIV YTEPLEVRAG TTVDVLYNPS NTVLNGSPEV WFRCSFNRWT HPSGPLPPQK MVNAENGSHL QATVRVPLDA YMMDFVFSES
0801: EEGGIYDNRD GMDYHIPVSD SMAKEPPMHI VHIAVEMAPI AKVGGLGDVV TSLSRAIQDL GHKVEVIFPK YDCLNLSNVK DLHCRQSFTW GGTEIKIWFG
0901: KVEGISVYFL EPQNGMFWVG CVYGKNDESR FGFFCHSALE FLLQSGSSPD IIHCHDWSSA PVAWLYKQQY VHNGLPNGRV VFTIHNLEFG VHHIGKAMAH
1001: CDKATTVSYT YSKEVSGHGS IAPHYFKFHG IRNGIDSDIW DPYNDNFIPV HYTSENVVEG KSSAKRALQE KLGLHQTDSP LVGIISRLTA QKGIHLIKHA
1101: IYRTLERNGQ VVLLGSAPDH RIQGDFSNLA AKLHGEFDGR VKLCLTYDEP LSHLIYAGAD FILVPSIFEP CGLTQLTAMR YGSIPIVRKT GGLYDTVFDV
1201: DDDKDRAREQ GLEPNGFSFE GADSNGVDYA LDRAITTWYD ARDWFHSLCK RVMEQDWSWN RPALDYMELY HSARKN
0001: MEVCWQIQRP ASLRPGFQEK GRVKINTFSV GFFPRSISSI ASLESQYKSN GFLHQITASA DFSRKKQGRM AASGPKSSGP RGFGRRTTVG SAQKRTQKKN
0101: GEKDSNATST ATNEVSGISK LPAAKVDVQK QSSVVLNERN VLDRSDIEDG SDRLDKKTTD DDDLLEQKLK LERENLRRKE IETLAAENLA RGDRMFVYPV
0201: IVKPDEDIEV FLNRNLSTLN NEPDVLIMGA FNEWRWKSFT RRLEKTWIHE DWLSCLLHIP KEAYKMDFVF FNGQSVYDNN DSKDFCVEIK GGMDKVDFEN
0301: FLLEEKLREQ EKLAKEEAER ERQKEEKRRI EAQKAAIEAD RAQAKAETQK RRELLQPAIK KAVVSAENVW YIEPSDFKAE DTVKLYYNKR SGPLTNSKEL
0401: WLHGGFNNWV DGLSIVVKLV NAELKDVDPK SGNWWFAEVV VPGGALVIDW VFADGPPKGA FLYDNNGYQD FHALVPQKLP EELYWLEEEN MIFRKLQEDR
0501: RLKEEVMRAK MEKTARLKAE TKERTLKKFL LSQKDVVYTE PLEIQAGNPV TVLYNPANTV LNGKPEVWFR GSFNRWTHRL GPLPPQKMEA TDDESSHVKT
0601: TAKVPLDAYM MDFVFSEKED GGIFDNKNGL DYHLPVVGGI SKEPPLHIVH IAVEMAPIAK VGGLGDVVTS LSRAVQELNH NVDIVFPKYD CIKHNFVKDL
0701: QFNRSYHWGG TEIKVWHGKV EGLSVYFLDP QNGLFQRGCV YGCADDAGRF GFFCHAALEF LLQGGFHPDI LHCHDWSSAP VSWLFKDHYT QYGLIKTRIV
0801: FTIHNLEFGA NAIGKAMTFA DKATTVSPTY AKEVAGNSVI SAHLYKFHGI INGIDPDIWD PYNDNFIPVP YTSENVVEGK RAAKEELQNR LGLKSADFPV
0901: VGIITRLTHQ KGIHLIKHAI WRTLERNGQV VLLGSAPDPR IQNDFVNLAN QLHSSHGDRA RLVLTYDEPL SHLIYAGADF ILVPSIFEPC GLTQLIAMRY
1001: GAVPVVRKTG GLFDTVFDVD HDKERAQAQV LEPNGFSFDG ADAPGVDYAL NRAISAWYDG REWFNSLCKT VMEQDWSWNR PALEYLELYH SARK
0101: GEKDSNATST ATNEVSGISK LPAAKVDVQK QSSVVLNERN VLDRSDIEDG SDRLDKKTTD DDDLLEQKLK LERENLRRKE IETLAAENLA RGDRMFVYPV
0201: IVKPDEDIEV FLNRNLSTLN NEPDVLIMGA FNEWRWKSFT RRLEKTWIHE DWLSCLLHIP KEAYKMDFVF FNGQSVYDNN DSKDFCVEIK GGMDKVDFEN
0301: FLLEEKLREQ EKLAKEEAER ERQKEEKRRI EAQKAAIEAD RAQAKAETQK RRELLQPAIK KAVVSAENVW YIEPSDFKAE DTVKLYYNKR SGPLTNSKEL
0401: WLHGGFNNWV DGLSIVVKLV NAELKDVDPK SGNWWFAEVV VPGGALVIDW VFADGPPKGA FLYDNNGYQD FHALVPQKLP EELYWLEEEN MIFRKLQEDR
0501: RLKEEVMRAK MEKTARLKAE TKERTLKKFL LSQKDVVYTE PLEIQAGNPV TVLYNPANTV LNGKPEVWFR GSFNRWTHRL GPLPPQKMEA TDDESSHVKT
0601: TAKVPLDAYM MDFVFSEKED GGIFDNKNGL DYHLPVVGGI SKEPPLHIVH IAVEMAPIAK VGGLGDVVTS LSRAVQELNH NVDIVFPKYD CIKHNFVKDL
0701: QFNRSYHWGG TEIKVWHGKV EGLSVYFLDP QNGLFQRGCV YGCADDAGRF GFFCHAALEF LLQGGFHPDI LHCHDWSSAP VSWLFKDHYT QYGLIKTRIV
0801: FTIHNLEFGA NAIGKAMTFA DKATTVSPTY AKEVAGNSVI SAHLYKFHGI INGIDPDIWD PYNDNFIPVP YTSENVVEGK RAAKEELQNR LGLKSADFPV
0901: VGIITRLTHQ KGIHLIKHAI WRTLERNGQV VLLGSAPDPR IQNDFVNLAN QLHSSHGDRA RLVLTYDEPL SHLIYAGADF ILVPSIFEPC GLTQLIAMRY
1001: GAVPVVRKTG GLFDTVFDVD HDKERAQAQV LEPNGFSFDG ADAPGVDYAL NRAISAWYDG REWFNSLCKT VMEQDWSWNR PALEYLELYH SARK
Arabidopsis Description
ATSS3SS3 [Source:UniProtKB/TrEMBL;Acc:A0A178W4M9]
SUBAcon: [mitochondrion,plastid]
SUBAcon: [mitochondrion,plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.