Skip to main content
crop-pal logo
Banana
Search for another protein from :
Banana
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion, plastid, cytosol

Predictor Summary:
  • cytosol 2
  • plastid 3
  • mitochondrion 3
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, mitochondrion, plastid
Any Predictor:cytosol, mitochondrion, plastid
BaCelLo:cytosol
EpiLoc:plastid
iPSORT:mitochondrion
MultiLoc:mitochondrion
Plant-mPloc:plastid
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:plastid
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra019836.1-P Field mustard endoplasmic reticulum, vacuole 79.4 36.93
GSMUA_Achr3P16350_001 Banana endoplasmic reticulum, vacuole 34.76 36.65
GSMUA_Achr8P24090_001 Banana cytosol 37.34 28.9
GSMUA_Achr1P16620_001 Banana cytosol 20.6 21.43
GSMUA_Achr5P00700_001 Banana plastid 87.12 18.12
CDY31209 Canola plastid 80.26 17.44
CDY49799 Canola mitochondrion 79.83 17.14
CDX97980 Canola plastid 79.83 17.05
KRH51091 Soybean plastid 78.54 16.91
AT1G11720.2 Thale cress mitochondrion, plastid 78.97 16.82
KRH20852 Soybean plastid 78.54 15.93
KRH11434 Soybean plastid 77.68 15.52
Zm00001d002256_P012 Maize plastid 78.97 15.49
KXG27148 Sorghum mitochondrion, plastid 77.68 15.2
Zm00001d026337_P013 Maize plastid 77.68 15.2
Solyc02g080570.2.1 Tomato nucleus, plastid 79.4 15.04
Os04t0624600-01 Rice plastid 77.68 14.88
Bra016818.1-P Field mustard cytosol 79.4 14.09
TraesCS2B01G491700.2 Wheat plastid 75.11 13.71
TraesCS2A01G468800.1 Wheat plastid 74.25 13.24
HORVU2Hr1G106410.9 Barley cytosol 75.11 13.17
GSMUA_Achr1P08190_001 Banana cytosol, plastid 34.33 12.99
GSMUA_Achr1P06140_001 Banana plastid 33.48 12.66
VIT_10s0116g01730.t01 Wine grape plastid 81.97 12.5
TraesCS2D01G468900.2 Wheat endoplasmic reticulum, golgi 75.11 12.47
GSMUA_Achr3P03290_001 Banana plastid 36.48 12.3
GSMUA_Achr9P20780_001 Banana plastid 31.76 12.05
GSMUA_Achr8P27560_001 Banana plastid 48.07 11.91
Os08t0191433-01 Rice plastid 76.82 11.53
GSMUA_Achr6P23190_001 Banana cytosol 35.62 11.4
HORVU1Hr1G021590.5 Barley mitochondrion 76.82 11.24
GSMUA_Achr4P10220_001 Banana plastid 36.48 10.93
TraesCS1D01G100100.1 Wheat cytosol 75.54 10.91
TraesCS1B01G119300.1 Wheat plastid 75.11 10.87
TraesCS1A01G091500.1 Wheat plastid 75.54 10.8
GSMUA_Achr1P24650_001 Banana mitochondrion 36.48 10.79
Zm00001d000002_P002 Maize plastid 75.54 10.49
KXG24650 Sorghum plastid 75.11 10.39
GSMUA_Achr3P16340_001 Banana plastid 14.16 4.5
GSMUA_Achr1P16610_001 Banana plastid 1.29 0.98
GSMUA_Achr11P... Banana plastid 0.86 0.2
GSMUA_Achr1P24640_001 Banana cytosol 0.0 0.0
Protein Annotations
EnsemblPlants:GSMUA_Achr11P18560_001EnsemblPlants:GSMUA_Achr11T18560_001EnsemblPlantsGene:GSMUA_Achr11G18560_001Gene3D:3.40.50.2000InterPro:Glyco_trans_1PANTHER:PTHR12526
PANTHER:PTHR12526:SF341PFAM:PF00534SUPFAM:SSF53756UniParc:UPI000294CD27UniProt:M0RTD6MapMan:3.2.2.4.3
Description
Soluble starch synthase 3, chloroplastic/amyloplastic [Source:GMGC_GENE;Acc:GSMUA_Achr11G18560_001]
Coordinates
chr11:-:19916548..19919771
Molecular Weight (calculated)
25773.6 Da
IEP (calculated)
6.966
GRAVY (calculated)
-0.239
Length
233 amino acids
Sequence
(BLAST)
001: MFRVSQTYSR EVAGNPAISS HLHKFHGIVN GIDPDIWDPY DDHFIPVPYT PENVVAGKKA AKEALQQRLG LRRSDHPLVG IITRLTVQKG IHLIKHAVGQ
101: TLERNGQVVL LGSAPDSRIQ NDFAHLADQL HSSHAGRVRF CLTYDEPLSH LIYAGADFIL VPSLFEPCGL TQLIAMRYGS IPVVRRTGGL YDTVFDIDND
201: KERARAQGLE PNGFSFEGAD PSGVDYALNR HVS
Best Arabidopsis Sequence Match ( AT1G11720.2 )
(BLAST)
0001: MEVCWQIQRP ASLRPGFQEK GRVKINTFSV GFFPRSISSI ASLESQYKSN GFLHQITASA DFSRKKQGRM AASGPKSSGP RGFGRRTTVG SAQKRTQKKN
0101: GEKDSNATST ATNEVSGISK LPAAKVDVQK QSSVVLNERN VLDRSDIEDG SDRLDKKTTD DDDLLEQKLK LERENLRRKE IETLAAENLA RGDRMFVYPV
0201: IVKPDEDIEV FLNRNLSTLN NEPDVLIMGA FNEWRWKSFT RRLEKTWIHE DWLSCLLHIP KEAYKMDFVF FNGQSVYDNN DSKDFCVEIK GGMDKVDFEN
0301: FLLEEKLREQ EKLAKEEAER ERQKEEKRRI EAQKAAIEAD RAQAKAETQK RRELLQPAIK KAVVSAENVW YIEPSDFKAE DTVKLYYNKR SGPLTNSKEL
0401: WLHGGFNNWV DGLSIVVKLV NAELKDVDPK SGNWWFAEVV VPGGALVIDW VFADGPPKGA FLYDNNGYQD FHALVPQKLP EELYWLEEEN MIFRKLQEDR
0501: RLKEEVMRAK MEKTARLKAE TKERTLKKFL LSQKDVVYTE PLEIQAGNPV TVLYNPANTV LNGKPEVWFR GSFNRWTHRL GPLPPQKMEA TDDESSHVKT
0601: TAKVPLDAYM MDFVFSEKED GGIFDNKNGL DYHLPVVGGI SKEPPLHIVH IAVEMAPIAK VGGLGDVVTS LSRAVQELNH NVDIVFPKYD CIKHNFVKDL
0701: QFNRSYHWGG TEIKVWHGKV EGLSVYFLDP QNGLFQRGCV YGCADDAGRF GFFCHAALEF LLQGGFHPDI LHCHDWSSAP VSWLFKDHYT QYGLIKTRIV
0801: FTIHNLEFGA NAIGKAMTFA DKATTVSPTY AKEVAGNSVI SAHLYKFHGI INGIDPDIWD PYNDNFIPVP YTSENVVEGK RAAKEELQNR LGLKSADFPV
0901: VGIITRLTHQ KGIHLIKHAI WRTLERNGQV VLLGSAPDPR IQNDFVNLAN QLHSSHGDRA RLVLTYDEPL SHLIYAGADF ILVPSIFEPC GLTQLIAMRY
1001: GAVPVVRKTG GLFDTVFDVD HDKERAQAQV LEPNGFSFDG ADAPGVDYAL NRAISAWYDG REWFNSLCKT VMEQDWSWNR PALEYLELYH SARK
Arabidopsis Description
ATSS3SS3 [Source:UniProtKB/TrEMBL;Acc:A0A178W4M9]
SUBAcon: [mitochondrion,plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.