Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 5
- mitochondrion 2
- nucleus 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KXG27148 | Sorghum | mitochondrion, plastid | 92.36 | 92.36 |
| Zm00001d002256_P012 | Maize | plastid | 91.6 | 91.83 |
| GSMUA_Achr11P... | Banana | cytosol, mitochondrion, plastid | 15.2 | 77.68 |
| Os04t0624600-01 | Rice | plastid | 79.01 | 77.38 |
| Bra019836.1-P | Field mustard | endoplasmic reticulum, vacuole | 30.56 | 72.65 |
| TraesCS2B01G491700.2 | Wheat | plastid | 76.24 | 71.16 |
| TraesCS2A01G468800.1 | Wheat | plastid | 75.99 | 69.24 |
| HORVU2Hr1G106410.9 | Barley | cytosol | 75.73 | 67.87 |
| TraesCS2D01G468900.2 | Wheat | endoplasmic reticulum, golgi | 75.4 | 64.01 |
| KRH51091 | Soybean | plastid | 52.48 | 57.76 |
| CDX97980 | Canola | plastid | 52.9 | 57.75 |
| CDY31209 | Canola | plastid | 51.89 | 57.65 |
| CDY49799 | Canola | mitochondrion | 52.48 | 57.6 |
| AT1G11720.2 | Thale cress | mitochondrion, plastid | 52.48 | 57.13 |
| GSMUA_Achr5P00700_001 | Banana | plastid | 53.4 | 56.79 |
| KRH20852 | Soybean | plastid | 54.24 | 56.22 |
| KRH11434 | Soybean | plastid | 54.16 | 55.32 |
| Solyc02g080570.2.1 | Tomato | nucleus, plastid | 55.42 | 53.66 |
| GSMUA_Achr11P... | Banana | plastid | 40.47 | 47.39 |
| Bra016818.1-P | Field mustard | cytosol | 51.97 | 47.14 |
| Zm00001d000002_P002 | Maize | plastid | 64.4 | 45.74 |
| VIT_10s0116g01730.t01 | Wine grape | plastid | 57.18 | 44.57 |
| Zm00001d029360_P001 | Maize | cytosol | 6.3 | 30.0 |
| Zm00001d010821_P002 | Maize | plastid | 20.74 | 27.17 |
| Zm00001d033690_P001 | Maize | cytosol, plastid | 7.3 | 25.59 |
| Zm00001d045261_P006 | Maize | plastid | 11.92 | 25.36 |
| Zm00001d052263_P001 | Maize | plastid | 14.86 | 25.29 |
| Zm00001d018033_P001 | Maize | plastid | 14.11 | 24.42 |
| Zm00001d019479_P004 | Maize | plastid | 12.34 | 23.48 |
| Zm00001d033937_P002 | Maize | plastid | 11.84 | 23.15 |
| Zm00001d045462_P001 | Maize | plastid | 11.84 | 23.15 |
| Zm00001d014150_P005 | Maize | plastid | 14.53 | 22.35 |
| Zm00001d037234_P005 | Maize | plastid | 13.35 | 21.06 |
| Zm00001d051976_P002 | Maize | plastid | 8.9 | 20.23 |
| Zm00001d027242_P002 | Maize | plastid | 8.98 | 18.26 |
Protein Annotations
| KEGG:00500+2.4.1.21 | MapMan:3.2.2.4.3 | Gene3D:3.40.50.2000 | ProteinID:AQK46302.1 | ProteinID:AQK46303.1 | ProteinID:AQK46305.1 |
| ProteinID:AQK46306.1 | ProteinID:AQK46309.1 | ProteinID:AQK46311.1 | InterPro:CBM25 | ncoils:Coil | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0004373 | GO:GO:0005488 | GO:GO:0016740 | GO:GO:0030246 | GO:GO:2001070 |
| InterPro:GS/SS | InterPro:Glyco_trans_1 | UniProt:K7TNQ6 | HAMAP:MF_00484 | PFAM:PF00534 | PFAM:PF08323 |
| PFAM:PF16760 | PANTHER:PTHR12526 | PANTHER:PTHR12526:SF345 | SMART:SM01066 | SUPFAM:SSF53756 | InterPro:Starch_synth_cat_dom |
| UniParc:UPI000221EA79 | EnsemblPlantsGene:Zm00001d026337 | EnsemblPlants:Zm00001d026337_P013 | EnsemblPlants:Zm00001d026337_T013 | SEG:seg | : |
Description
Starch synthase IIIb-1
Coordinates
chr10:-:143786837..143796066
Molecular Weight (calculated)
133983.0 Da
IEP (calculated)
5.369
GRAVY (calculated)
-0.545
Length
1191 amino acids
Sequence
(BLAST)
(BLAST)
0001: MEMNLRAESP LCSRGRPALV VRPAAAATGL ALSVVRCSRF TRGGLVRCMV SSSDYPKRNP RRASTSKSKG VASGGYASRP TAESSTKKIE QSRNNEGDFS
0101: RANGSLYGEA AEQASTAEES SQVYMTGDIL SGAERDGAGT EEEADQNQSS ALPSASMDDD SIDRQLDEYR GKISALVSSK PEPSSLASVA GQNESVGGFH
0201: GQHEPITGSE EHGSSIVDAP TKGRLFAEAV VGHKDFTESA AGKASSENEE GQAVSLEDDV GISTDADEEL PVSEDDPEVL LRRLQELADE NYSTGNNCFV
0301: FPEVVKADSM IDLYLNRSMS ALASESDVFV KGAFNGWRWN RFTETMHRSE LRGDWWCCKL YIPKQAYRLD FVFFNGDTVY ENNNHNDFFL EIESDIDEHS
0401: FEDFLVEEKR KELERLAAEE AERKRQAEER HRREEERAAM EADRAQARSE VEMKKEKLRQ MLSSASRYAE NLWYIEPNTY RGGDRVRLYY NRSSRSLMHN
0501: TEIWMHGGYN NWIDGLSIAE RLVKSHEKEG DWWYVEVTLP ERALVLDWVF ADGPPGNAWN YDNNGRQDFH AIVPNNISDD IFWVEEEHRI FTRLQQERRE
0601: RESAERIKAE RSAKMKAEMK EKTMRAFLLS QKHIVYTEPL EVRAGTTVDV LYNPSNTVLN GKSEVWFRGS FNRWTHPSGP LPPQKMVKAE NSSHLRTTVS
0701: VPLDAYMMDF VFSESEEGGR YDNRNGMDYH IPVSDSVARE PPMHIVHIAV EMAPIAKVGG LGDVVTSLSR AVQDLGHKVE VILPKYDCLI LSSVKDLHYQ
0801: QSFASGGTEV KVWFGKVEDL PVYFLEPQNG MFWVGCVYGK NDESRFGFFC HSALEFLLQK GSSPDIIHCH DWSSAPVAWL YKEQYALNGM GNGRIVFTIH
0901: NLEFGAHHIG KAMAHCDKAT TVSDTYSKEV AGHGAIAPHY YKFHGIRNGI DPDIWDPYTD RFIPVHYTSE NVLEGKSAAK KALQQMLGLQ QTDSPVVGII
1001: TRLTVQKGIH LIKHAMHRAL ERNGQVVLLG SAPDHRIQGD FTNLASKLHG EYHGRVKLCL TYDEPLSHLI YAGADFILVP SIFEPCGLTQ LIAMRYGSIP
1101: IVRKTGGLYD TVFDVDDDKD RAQAQGLEPN GFSFEGADSS GVDYALDRAI TAFYDARDWF NSLSKRVMEQ DWSWNRPALD YMELYHSARK N
0101: RANGSLYGEA AEQASTAEES SQVYMTGDIL SGAERDGAGT EEEADQNQSS ALPSASMDDD SIDRQLDEYR GKISALVSSK PEPSSLASVA GQNESVGGFH
0201: GQHEPITGSE EHGSSIVDAP TKGRLFAEAV VGHKDFTESA AGKASSENEE GQAVSLEDDV GISTDADEEL PVSEDDPEVL LRRLQELADE NYSTGNNCFV
0301: FPEVVKADSM IDLYLNRSMS ALASESDVFV KGAFNGWRWN RFTETMHRSE LRGDWWCCKL YIPKQAYRLD FVFFNGDTVY ENNNHNDFFL EIESDIDEHS
0401: FEDFLVEEKR KELERLAAEE AERKRQAEER HRREEERAAM EADRAQARSE VEMKKEKLRQ MLSSASRYAE NLWYIEPNTY RGGDRVRLYY NRSSRSLMHN
0501: TEIWMHGGYN NWIDGLSIAE RLVKSHEKEG DWWYVEVTLP ERALVLDWVF ADGPPGNAWN YDNNGRQDFH AIVPNNISDD IFWVEEEHRI FTRLQQERRE
0601: RESAERIKAE RSAKMKAEMK EKTMRAFLLS QKHIVYTEPL EVRAGTTVDV LYNPSNTVLN GKSEVWFRGS FNRWTHPSGP LPPQKMVKAE NSSHLRTTVS
0701: VPLDAYMMDF VFSESEEGGR YDNRNGMDYH IPVSDSVARE PPMHIVHIAV EMAPIAKVGG LGDVVTSLSR AVQDLGHKVE VILPKYDCLI LSSVKDLHYQ
0801: QSFASGGTEV KVWFGKVEDL PVYFLEPQNG MFWVGCVYGK NDESRFGFFC HSALEFLLQK GSSPDIIHCH DWSSAPVAWL YKEQYALNGM GNGRIVFTIH
0901: NLEFGAHHIG KAMAHCDKAT TVSDTYSKEV AGHGAIAPHY YKFHGIRNGI DPDIWDPYTD RFIPVHYTSE NVLEGKSAAK KALQQMLGLQ QTDSPVVGII
1001: TRLTVQKGIH LIKHAMHRAL ERNGQVVLLG SAPDHRIQGD FTNLASKLHG EYHGRVKLCL TYDEPLSHLI YAGADFILVP SIFEPCGLTQ LIAMRYGSIP
1101: IVRKTGGLYD TVFDVDDDKD RAQAQGLEPN GFSFEGADSS GVDYALDRAI TAFYDARDWF NSLSKRVMEQ DWSWNRPALD YMELYHSARK N
0001: MISYFLNQDF SRKKQGRMAA SGPKSSGPRG FGRRTTVGSA QKRTQKKNGE KDSNATSTAT NEVSGISKLP AAKVDVQKQS SVVLNERNVL DRSDIEDGSD
0101: RLDKKTTDDD DLLEQKLKLE RENLRRKEIE TLAAENLARG DRMFVYPVIV KPDEDIEVFL NRNLSTLNNE PDVLIMGAFN EWRWKSFTRR LEKTWIHEDW
0201: LSCLLHIPKE AYKMDFVFFN GQSVYDNNDS KDFCVEIKGG MDKVDFENFL LEEKLREQEK LAKEEAERER QKEEKRRIEA QKAAIEADRA QAKAETQKRR
0301: ELLQPAIKKA VVSAENVWYI EPSDFKAEDT VKLYYNKRSG PLTNSKELWL HGGFNNWVDG LSIVVKLVNA ELKDVDPKSG NWWFAEVVVP GGALVIDWVF
0401: ADGPPKGAFL YDNNGYQDFH ALVPQKLPEE LYWLEEENMI FRKLQEDRRL KEEVMRAKME KTARLKAETK ERTLKKFLLS QKDVVYTEPL EIQAGNPVTV
0501: LYNPANTVLN GKPEVWFRGS FNRWTHRLGP LPPQKMEATD DESSHVKTTA KVPLDAYMMD FVFSEKEDGG IFDNKNGLDY HLPVVGGISK EPPLHIVHIA
0601: VEMAPIAKVG GLGDVVTSLS RAVQELNHNV DIVFPKYDCI KHNFVKDLQF NRSYHWGGTE IKVWHGKVEG LSVYFLDPQN GLFQRGCVYG CADDAGRFGF
0701: FCHAALEFLL QGGFHPDILH CHDWSSAPVS WLFKDHYTQY GLIKTRIVFT IHNLEFGANA IGKAMTFADK ATTVSPTYAK EVAGNSVISA HLYKFHGIIN
0801: GIDPDIWDPY NDNFIPVPYT SENVVEGKRA AKEELQNRLG LKSADFPVVG IITRLTHQKG IHLIKHAIWR TLERNGQVVL LGSAPDPRIQ NDFVNLANQL
0901: HSSHGDRARL VLTYDEPLSH LIYAGADFIL VPSIFEPCGL TQLIAMRYGA VPVVRKTGGL FDTVFDVDHD KERAQAQVLE PNGFSFDGAD APGVDYALNR
1001: AISAWYDGRE WFNSLCKTVM EQDWSWNRPA LEYLELYHSA RK
0101: RLDKKTTDDD DLLEQKLKLE RENLRRKEIE TLAAENLARG DRMFVYPVIV KPDEDIEVFL NRNLSTLNNE PDVLIMGAFN EWRWKSFTRR LEKTWIHEDW
0201: LSCLLHIPKE AYKMDFVFFN GQSVYDNNDS KDFCVEIKGG MDKVDFENFL LEEKLREQEK LAKEEAERER QKEEKRRIEA QKAAIEADRA QAKAETQKRR
0301: ELLQPAIKKA VVSAENVWYI EPSDFKAEDT VKLYYNKRSG PLTNSKELWL HGGFNNWVDG LSIVVKLVNA ELKDVDPKSG NWWFAEVVVP GGALVIDWVF
0401: ADGPPKGAFL YDNNGYQDFH ALVPQKLPEE LYWLEEENMI FRKLQEDRRL KEEVMRAKME KTARLKAETK ERTLKKFLLS QKDVVYTEPL EIQAGNPVTV
0501: LYNPANTVLN GKPEVWFRGS FNRWTHRLGP LPPQKMEATD DESSHVKTTA KVPLDAYMMD FVFSEKEDGG IFDNKNGLDY HLPVVGGISK EPPLHIVHIA
0601: VEMAPIAKVG GLGDVVTSLS RAVQELNHNV DIVFPKYDCI KHNFVKDLQF NRSYHWGGTE IKVWHGKVEG LSVYFLDPQN GLFQRGCVYG CADDAGRFGF
0701: FCHAALEFLL QGGFHPDILH CHDWSSAPVS WLFKDHYTQY GLIKTRIVFT IHNLEFGANA IGKAMTFADK ATTVSPTYAK EVAGNSVISA HLYKFHGIIN
0801: GIDPDIWDPY NDNFIPVPYT SENVVEGKRA AKEELQNRLG LKSADFPVVG IITRLTHQKG IHLIKHAIWR TLERNGQVVL LGSAPDPRIQ NDFVNLANQL
0901: HSSHGDRARL VLTYDEPLSH LIYAGADFIL VPSIFEPCGL TQLIAMRYGA VPVVRKTGGL FDTVFDVDHD KERAQAQVLE PNGFSFDGAD APGVDYALNR
1001: AISAWYDGRE WFNSLCKTVM EQDWSWNRPA LEYLELYHSA RK
Arabidopsis Description
ATSS3SS3 [Source:UniProtKB/TrEMBL;Acc:A0A178W4M9]
SUBAcon: [mitochondrion,plastid]
SUBAcon: [mitochondrion,plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.