Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 5
- mitochondrion 3
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d026337_P013 | Maize | plastid | 91.83 | 91.6 |
| KXG27148 | Sorghum | mitochondrion, plastid | 91.67 | 91.44 |
| GSMUA_Achr11P... | Banana | cytosol, mitochondrion, plastid | 15.49 | 78.97 |
| Os04t0624600-01 | Rice | plastid | 78.87 | 77.06 |
| Bra019836.1-P | Field mustard | endoplasmic reticulum, vacuole | 30.3 | 71.86 |
| TraesCS2B01G491700.2 | Wheat | plastid | 75.67 | 70.45 |
| TraesCS2A01G468800.1 | Wheat | plastid | 75.42 | 68.55 |
| HORVU2Hr1G106410.9 | Barley | cytosol | 75.0 | 67.04 |
| TraesCS2D01G468900.2 | Wheat | endoplasmic reticulum, golgi | 75.0 | 63.51 |
| KRH51091 | Soybean | plastid | 52.95 | 58.13 |
| CDY31209 | Canola | plastid | 52.36 | 58.02 |
| CDX97980 | Canola | plastid | 53.03 | 57.75 |
| CDY49799 | Canola | mitochondrion | 52.61 | 57.6 |
| AT1G11720.2 | Thale cress | mitochondrion, plastid | 52.78 | 57.31 |
| KRH20852 | Soybean | plastid | 54.97 | 56.83 |
| GSMUA_Achr5P00700_001 | Banana | plastid | 53.37 | 56.61 |
| KRH11434 | Soybean | plastid | 54.63 | 55.66 |
| Solyc02g080570.2.1 | Tomato | nucleus, plastid | 55.89 | 53.98 |
| Bra016818.1-P | Field mustard | cytosol | 52.44 | 47.45 |
| GSMUA_Achr11P... | Banana | plastid | 40.32 | 47.1 |
| Zm00001d000002_P002 | Maize | plastid | 63.89 | 45.26 |
| VIT_10s0116g01730.t01 | Wine grape | plastid | 57.58 | 44.76 |
| Zm00001d029360_P001 | Maize | cytosol | 6.31 | 30.0 |
| Zm00001d010821_P002 | Maize | plastid | 20.37 | 26.62 |
| Zm00001d045261_P006 | Maize | plastid | 12.12 | 25.71 |
| Zm00001d033690_P001 | Maize | cytosol, plastid | 7.24 | 25.29 |
| Zm00001d052263_P001 | Maize | plastid | 14.73 | 25.0 |
| Zm00001d018033_P001 | Maize | plastid | 13.97 | 24.13 |
| Zm00001d019479_P004 | Maize | plastid | 12.21 | 23.16 |
| Zm00001d033937_P002 | Maize | plastid | 11.78 | 22.99 |
| Zm00001d045462_P001 | Maize | plastid | 11.78 | 22.99 |
| Zm00001d014150_P005 | Maize | plastid | 14.31 | 21.96 |
| Zm00001d037234_P005 | Maize | plastid | 13.13 | 20.66 |
| Zm00001d051976_P002 | Maize | plastid | 8.75 | 19.85 |
| Zm00001d027242_P002 | Maize | plastid | 9.01 | 18.26 |
Protein Annotations
| KEGG:00500+2.4.1.21 | MapMan:3.2.2.4.3 | Gene3D:3.40.50.2000 | UniProt:A0A1D6DYQ3 | InterPro:CBM25 | ncoils:Coil |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004373 | GO:GO:0005488 | GO:GO:0016740 | GO:GO:0030246 |
| GO:GO:2001070 | InterPro:GS/SS | InterPro:Glyco_trans_1 | HAMAP:MF_00484 | ProteinID:ONM13687.1 | ProteinID:ONM13689.1 |
| ProteinID:ONM13692.1 | ProteinID:ONM13695.1 | ProteinID:ONM13697.1 | ProteinID:ONM13700.1 | PFAM:PF00534 | PFAM:PF08323 |
| PFAM:PF16760 | PANTHER:PTHR12526 | PANTHER:PTHR12526:SF345 | SMART:SM01066 | SUPFAM:SSF53756 | InterPro:Starch_synth_cat_dom |
| UniParc:UPI000844FDFE | EnsemblPlantsGene:Zm00001d002256 | EnsemblPlants:Zm00001d002256_P012 | EnsemblPlants:Zm00001d002256_T012 | SEG:seg | : |
Description
Starch synthase 3 chloroplastic/amyloplastic
Coordinates
chr2:+:9055521..9066450
Molecular Weight (calculated)
133679.0 Da
IEP (calculated)
5.369
GRAVY (calculated)
-0.518
Length
1188 amino acids
Sequence
(BLAST)
(BLAST)
0001: METNLRAQSP LCSRTRPALA VRPDAAATGL TLSVIRRSRF TRGGLVRCMV SSSDYHKSSP RRTSTSKSKG VPSGGYASRP TAESSTKKIE QSSDDEGDFS
0101: RTNGSLYGEA AEQASTAEES SQVYSTGDIS SSAERGEAGT EEEADQNQSS ALFSVSVDDD SIDRKLDEYR GKISALASSK PKSSSLASVA GQNEPVGGQE
0201: EPVTGSKEHD SSIVDAPIRG RPFAEAVVGY KDFTESVAGM AASKNEEEQL VSLEDVVGIS TDADIEAPVE DDVDPEVLLR RLQELADENY LIGNNCFSFP
0301: EVVMADSMID LYLNRSMSAL ASESNVFVKG AFNGWRWNAF TETMHKSELR GDWWCCKLYI PKQAYRLDFV FFNGDTVYEN NNHNDFFLEI ESGIDEHSFE
0401: DFLVEEKRKE LERLAAEEAE RKIQAEEERK RGEERAAMEA DRAQARSEVE MKKEKLRQLL SSASRYADNL WYIEPNTYRG GDRVRLYYHR SSRPLMHDTE
0501: IWMHGGYNNW IDGLSIAERL VKSHEKEGDW WYAEVTLPER ALLFDWVFAD GPPGNARNYD NNGRQDFHAI VPNNISDDIF WVEEEHRIFT RLQQERRERE
0601: GAERIKAERS AKMKAEMKEK TMRAFLLSQK HIVYTEPLEV HAGTTVDILY NPSNTVLNGK TEVWFRGSFN RWTHPSGPLP PQKMVKAENG SHLRTTVRVP
0701: LDAYMMDFVF SESEGGIYDN RNGMDYHIPV SDSVAREPPM HIVHIAVEMA PIAKVGGLGD VVTSLSRAVQ DLGHKVEVIL PKYDCLNLNS VKDLRYQQSF
0801: TWGGTEIKVW FGKVEDLPVY FLEPQNGMFW VGCVYGKNDE SRFGFFCHSA LEFLLQKGSS PDIIHCHDWS SAPVAWLYKE HYALNGIGNG RIVFTIHNLE
0901: FGAHHIGKAM AHCDKATTVS DTYSKEVAGH GAIAPHYYKF HGIRNGIDPD IWDPYTDKFI PVHYTSENVV EGKSAAKKAL QQMLGLQQTD TPVVGIITRL
1001: TVQKGIHLIK HAMHRALERN GQVVLLGSAP DPRIQSDFTN LASKLHGEYH GRVKLCLTYD EPLSHLIYAG ADFILVPSIF EPCGLTQLIA MRYGSIPVVR
1101: KTGGLYDTVF DVDNDKDRAQ AQGLEPNGFS FEGADSSGVD YALDRAITTF YDARDWFNSL CKRVMEQDWS WNRPALDYME LYHSARKS
0101: RTNGSLYGEA AEQASTAEES SQVYSTGDIS SSAERGEAGT EEEADQNQSS ALFSVSVDDD SIDRKLDEYR GKISALASSK PKSSSLASVA GQNEPVGGQE
0201: EPVTGSKEHD SSIVDAPIRG RPFAEAVVGY KDFTESVAGM AASKNEEEQL VSLEDVVGIS TDADIEAPVE DDVDPEVLLR RLQELADENY LIGNNCFSFP
0301: EVVMADSMID LYLNRSMSAL ASESNVFVKG AFNGWRWNAF TETMHKSELR GDWWCCKLYI PKQAYRLDFV FFNGDTVYEN NNHNDFFLEI ESGIDEHSFE
0401: DFLVEEKRKE LERLAAEEAE RKIQAEEERK RGEERAAMEA DRAQARSEVE MKKEKLRQLL SSASRYADNL WYIEPNTYRG GDRVRLYYHR SSRPLMHDTE
0501: IWMHGGYNNW IDGLSIAERL VKSHEKEGDW WYAEVTLPER ALLFDWVFAD GPPGNARNYD NNGRQDFHAI VPNNISDDIF WVEEEHRIFT RLQQERRERE
0601: GAERIKAERS AKMKAEMKEK TMRAFLLSQK HIVYTEPLEV HAGTTVDILY NPSNTVLNGK TEVWFRGSFN RWTHPSGPLP PQKMVKAENG SHLRTTVRVP
0701: LDAYMMDFVF SESEGGIYDN RNGMDYHIPV SDSVAREPPM HIVHIAVEMA PIAKVGGLGD VVTSLSRAVQ DLGHKVEVIL PKYDCLNLNS VKDLRYQQSF
0801: TWGGTEIKVW FGKVEDLPVY FLEPQNGMFW VGCVYGKNDE SRFGFFCHSA LEFLLQKGSS PDIIHCHDWS SAPVAWLYKE HYALNGIGNG RIVFTIHNLE
0901: FGAHHIGKAM AHCDKATTVS DTYSKEVAGH GAIAPHYYKF HGIRNGIDPD IWDPYTDKFI PVHYTSENVV EGKSAAKKAL QQMLGLQQTD TPVVGIITRL
1001: TVQKGIHLIK HAMHRALERN GQVVLLGSAP DPRIQSDFTN LASKLHGEYH GRVKLCLTYD EPLSHLIYAG ADFILVPSIF EPCGLTQLIA MRYGSIPVVR
1101: KTGGLYDTVF DVDNDKDRAQ AQGLEPNGFS FEGADSSGVD YALDRAITTF YDARDWFNSL CKRVMEQDWS WNRPALDYME LYHSARKS
0001: MEVCWQIQRP ASLRPGFQEK GRVKINTFSV GFFPRSISSI ASLESQYKSN GFLHQITASA DFSRKKQGRM AASGPKSSGP RGFGRRTTVG SAQKRTQKKN
0101: GEKDSNATST ATNEVSGISK LPAAKVDVQK QSSVVLNERN VLDRSDIEDG SDRLDKKTTD DDDLLEQKLK LERENLRRKE IETLAAENLA RGDRMFVYPV
0201: IVKPDEDIEV FLNRNLSTLN NEPDVLIMGA FNEWRWKSFT RRLEKTWIHE DWLSCLLHIP KEAYKMDFVF FNGQSVYDNN DSKDFCVEIK GGMDKVDFEN
0301: FLLEEKLREQ EKLAKEEAER ERQKEEKRRI EAQKAAIEAD RAQAKAETQK RRELLQPAIK KAVVSAENVW YIEPSDFKAE DTVKLYYNKR SGPLTNSKEL
0401: WLHGGFNNWV DGLSIVVKLV NAELKDVDPK SGNWWFAEVV VPGGALVIDW VFADGPPKGA FLYDNNGYQD FHALVPQKLP EELYWLEEEN MIFRKLQEDR
0501: RLKEEVMRAK MEKTARLKAE TKERTLKKFL LSQKDVVYTE PLEIQAGNPV TVLYNPANTV LNGKPEVWFR GSFNRWTHRL GPLPPQKMEA TDDESSHVKT
0601: TAKVPLDAYM MDFVFSEKED GGIFDNKNGL DYHLPVVGGI SKEPPLHIVH IAVEMAPIAK VGGLGDVVTS LSRAVQELNH NVDIVFPKYD CIKHNFVKDL
0701: QFNRSYHWGG TEIKVWHGKV EGLSVYFLDP QNGLFQRGCV YGCADDAGRF GFFCHAALEF LLQGGFHPDI LHCHDWSSAP VSWLFKDHYT QYGLIKTRIV
0801: FTIHNLEFGA NAIGKAMTFA DKATTVSPTY AKEVAGNSVI SAHLYKFHGI INGIDPDIWD PYNDNFIPVP YTSENVVEGK RAAKEELQNR LGLKSADFPV
0901: VGIITRLTHQ KGIHLIKHAI WRTLERNGQV VLLGSAPDPR IQNDFVNLAN QLHSSHGDRA RLVLTYDEPL SHLIYAGADF ILVPSIFEPC GLTQLIAMRY
1001: GAVPVVRKTG GLFDTVFDVD HDKERAQAQV LEPNGFSFDG ADAPGVDYAL NRAISAWYDG REWFNSLCKT VMEQDWSWNR PALEYLELYH SARK
0101: GEKDSNATST ATNEVSGISK LPAAKVDVQK QSSVVLNERN VLDRSDIEDG SDRLDKKTTD DDDLLEQKLK LERENLRRKE IETLAAENLA RGDRMFVYPV
0201: IVKPDEDIEV FLNRNLSTLN NEPDVLIMGA FNEWRWKSFT RRLEKTWIHE DWLSCLLHIP KEAYKMDFVF FNGQSVYDNN DSKDFCVEIK GGMDKVDFEN
0301: FLLEEKLREQ EKLAKEEAER ERQKEEKRRI EAQKAAIEAD RAQAKAETQK RRELLQPAIK KAVVSAENVW YIEPSDFKAE DTVKLYYNKR SGPLTNSKEL
0401: WLHGGFNNWV DGLSIVVKLV NAELKDVDPK SGNWWFAEVV VPGGALVIDW VFADGPPKGA FLYDNNGYQD FHALVPQKLP EELYWLEEEN MIFRKLQEDR
0501: RLKEEVMRAK MEKTARLKAE TKERTLKKFL LSQKDVVYTE PLEIQAGNPV TVLYNPANTV LNGKPEVWFR GSFNRWTHRL GPLPPQKMEA TDDESSHVKT
0601: TAKVPLDAYM MDFVFSEKED GGIFDNKNGL DYHLPVVGGI SKEPPLHIVH IAVEMAPIAK VGGLGDVVTS LSRAVQELNH NVDIVFPKYD CIKHNFVKDL
0701: QFNRSYHWGG TEIKVWHGKV EGLSVYFLDP QNGLFQRGCV YGCADDAGRF GFFCHAALEF LLQGGFHPDI LHCHDWSSAP VSWLFKDHYT QYGLIKTRIV
0801: FTIHNLEFGA NAIGKAMTFA DKATTVSPTY AKEVAGNSVI SAHLYKFHGI INGIDPDIWD PYNDNFIPVP YTSENVVEGK RAAKEELQNR LGLKSADFPV
0901: VGIITRLTHQ KGIHLIKHAI WRTLERNGQV VLLGSAPDPR IQNDFVNLAN QLHSSHGDRA RLVLTYDEPL SHLIYAGADF ILVPSIFEPC GLTQLIAMRY
1001: GAVPVVRKTG GLFDTVFDVD HDKERAQAQV LEPNGFSFDG ADAPGVDYAL NRAISAWYDG REWFNSLCKT VMEQDWSWNR PALEYLELYH SARK
Arabidopsis Description
ATSS3SS3 [Source:UniProtKB/TrEMBL;Acc:A0A178W4M9]
SUBAcon: [mitochondrion,plastid]
SUBAcon: [mitochondrion,plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.