Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU0Hr1G005550.1 | Barley | cytosol | 14.52 | 98.47 |
| TraesCS2B01G491700.2 | Wheat | plastid | 88.41 | 92.08 |
| TraesCS2A01G468800.1 | Wheat | plastid | 87.66 | 89.14 |
| TraesCS2D01G468900.2 | Wheat | endoplasmic reticulum, golgi | 87.28 | 82.68 |
| Os04t0624600-01 | Rice | plastid | 72.46 | 79.19 |
| KXG27148 | Sorghum | mitochondrion, plastid | 68.7 | 76.66 |
| Zm00001d026337_P013 | Maize | plastid | 67.87 | 75.73 |
| GSMUA_Achr11P... | Banana | cytosol, mitochondrion, plastid | 13.17 | 75.11 |
| Zm00001d002256_P012 | Maize | plastid | 67.04 | 75.0 |
| Bra019836.1-P | Field mustard | endoplasmic reticulum, vacuole | 27.09 | 71.86 |
| CDY31209 | Canola | plastid | 47.93 | 59.42 |
| CDY49799 | Canola | mitochondrion | 48.46 | 59.35 |
| CDX97980 | Canola | plastid | 48.46 | 59.03 |
| GSMUA_Achr5P00700_001 | Banana | plastid | 49.44 | 58.66 |
| AT1G11720.2 | Thale cress | mitochondrion, plastid | 48.16 | 58.5 |
| KRH51091 | Soybean | plastid | 47.25 | 58.04 |
| KRH20852 | Soybean | plastid | 49.74 | 57.53 |
| KRH11434 | Soybean | plastid | 49.81 | 56.78 |
| Solyc02g080570.2.1 | Tomato | nucleus, plastid | 49.96 | 53.98 |
| GSMUA_Achr11P... | Banana | plastid | 38.45 | 50.25 |
| HORVU1Hr1G021590.5 | Barley | mitochondrion | 59.67 | 49.78 |
| Bra016818.1-P | Field mustard | cytosol | 48.91 | 49.51 |
| HORVU0Hr1G005540.2 | Barley | cytosol | 35.67 | 46.79 |
| VIT_10s0116g01730.t01 | Wine grape | plastid | 51.92 | 45.16 |
| HORVU1Hr1G080950.5 | Barley | plastid | 19.56 | 27.2 |
| HORVU7Hr1G025390.4 | Barley | cytosol, plastid | 11.29 | 26.09 |
| HORVU6Hr1G075950.4 | Barley | plastid | 13.09 | 25.78 |
| HORVU7Hr1G012380.5 | Barley | plastid | 11.29 | 24.88 |
| HORVU2Hr1G090980.3 | Barley | plastid | 11.06 | 24.79 |
| HORVU1Hr1G035960.19 | Barley | cytosol, plastid | 13.09 | 21.67 |
| HORVU7Hr1G038420.1 | Barley | plastid | 13.02 | 20.21 |
Protein Annotations
| KEGG:00500+2.4.1.21 | MapMan:3.2.2.4.3 | Gene3D:3.40.50.2000 | UniProt:A0A287JBZ2 | InterPro:CBM25 | ncoils:Coil |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004373 | GO:GO:0005488 | GO:GO:0016740 | GO:GO:0030246 |
| GO:GO:2001070 | InterPro:GS/SS | InterPro:Glyco_trans_1 | EnsemblPlantsGene:HORVU2Hr1G106410 | EnsemblPlants:HORVU2Hr1G106410.9 | HAMAP:MF_00484 |
| PFAM:PF00534 | PFAM:PF08323 | PFAM:PF16760 | PANTHER:PTHR12526 | PANTHER:PTHR12526:SF345 | SMART:SM01066 |
| SUPFAM:SSF53756 | InterPro:Starch_synth_cat_dom | UniParc:UPI000B460515 | SEG:seg | : | : |
Description
No Description!
Coordinates
chrchr2H:-:709519200..709527105
Molecular Weight (calculated)
149485.0 Da
IEP (calculated)
5.085
GRAVY (calculated)
-0.606
Length
1329 amino acids
Sequence
(BLAST)
(BLAST)
0001: HWYTHTDSQP ASTFRREISE ARKKEGGKGG RSASRSTDEG REGVPWGFDF PWPMEMALRA QTPLCSRSRP LLLVRAAAVP GLAQSIVKCS RFTRSRLVRC
0101: MVASSDYPKR NPRRSSAPKP KGTASRGYAP RPSADSWTST KKIEHGSADE DGDLGRSNGT LSGDATEQAS TAEEESGVEF AGNVSSSAGL EGVAETEEEA
0201: DQNQPPALSS TSMDVESVNE ATEQTIIGDE SSVVDFSGNV SGSVALEVVD ESETEEEADQ KQSSSLASTS MDSESIDREL EGYRARINAL VGASTQEQDQ
0301: SIIGVHDQDK SVISPNEQDI SAVDVPEQGL SGVGVTREDP TKQTTSKQEI TEAAVEEISS KNFVARKHSI SGDGVEASKN ANQQPLVDGD ELKITEDEEQ
0401: HEPEMQEYVR KDVDLQALKR RLEELADGNY SIGNKCFVFP ELVKADSVID LYLNRSMSAL ASEPDILIKG AFNGWRWNHF TERLHKSELS GDWWCCKLYI
0501: PKQAYRLDFV FFNGDTVYEN NSYNDFVLHI ESDIDEHSFE DFLLEEKQRE LERLAAEEAE RERQAEEERR KEEERAAMEA DRAQAKAEVE MTRNNLQHVL
0601: GLASRYANNL WYIEPNTYKG GDRVRLYYNR SSGPLKHKNE IWLHGSYNNW TDGPSIVERL VKSDEQDGDW WYANVTLPES ALVLDWVFAD GPPGNARKYD
0701: NNGKRDFHAA VSKSISEDLF WVKEEHRIFE RLQRERKEKE DAGRRKAEIT ARMKAEMKEK TMREFLLSQK HIVYTEPLEV RAGMTVDVLY NPSNTVLNGS
0801: PEVWFRCSFN RWTHPSGPLP PQKMVNAENG SHLQATVRVP LDAYMMDFVF SESEEGGMYD NRDGMDYHIP VSDSMAKEPP MHIVHIAVEM APIAKVGGLG
0901: DVVTSLSRAI QDLGHKVEVV FPKYDCLNLS NVKDLHCRQS FTWGGTEIKV WFGKVEGISV YFLEPQNGMF WVGCVYGRND ESRFGFFCHS ALEFLLQSGS
1001: SPDIIHCHDW SSAPVAWLYK QHYVHNGLPN GRVVFTIHNL EFGVHHIGKA MAHCDKATTV SYTYSKEVSG HGSIAPHYFK FHGIRNGIDS DIWDPYNDNF
1101: IPVHYTSENV VEGKSSAKRA LQEKLGLHQT DSPLVGIISR LTAQKGIHLI KHAIYRTLER NGQVVLLGSA PDHRIQGDFS NLASKLHGEF DGRVKLCLTY
1201: DEPLSHLIYA GADFILVPSI FEPCGLTQLT AMRYGSIPIV RKTGGLYDTV FDVDDDKDRA REQGLEPNGF SFEGADSNGV DYALDRAITT WYDARGWFHS
1301: LCKRVMEQDW SWNRPALDYM ELYHSARKN
0101: MVASSDYPKR NPRRSSAPKP KGTASRGYAP RPSADSWTST KKIEHGSADE DGDLGRSNGT LSGDATEQAS TAEEESGVEF AGNVSSSAGL EGVAETEEEA
0201: DQNQPPALSS TSMDVESVNE ATEQTIIGDE SSVVDFSGNV SGSVALEVVD ESETEEEADQ KQSSSLASTS MDSESIDREL EGYRARINAL VGASTQEQDQ
0301: SIIGVHDQDK SVISPNEQDI SAVDVPEQGL SGVGVTREDP TKQTTSKQEI TEAAVEEISS KNFVARKHSI SGDGVEASKN ANQQPLVDGD ELKITEDEEQ
0401: HEPEMQEYVR KDVDLQALKR RLEELADGNY SIGNKCFVFP ELVKADSVID LYLNRSMSAL ASEPDILIKG AFNGWRWNHF TERLHKSELS GDWWCCKLYI
0501: PKQAYRLDFV FFNGDTVYEN NSYNDFVLHI ESDIDEHSFE DFLLEEKQRE LERLAAEEAE RERQAEEERR KEEERAAMEA DRAQAKAEVE MTRNNLQHVL
0601: GLASRYANNL WYIEPNTYKG GDRVRLYYNR SSGPLKHKNE IWLHGSYNNW TDGPSIVERL VKSDEQDGDW WYANVTLPES ALVLDWVFAD GPPGNARKYD
0701: NNGKRDFHAA VSKSISEDLF WVKEEHRIFE RLQRERKEKE DAGRRKAEIT ARMKAEMKEK TMREFLLSQK HIVYTEPLEV RAGMTVDVLY NPSNTVLNGS
0801: PEVWFRCSFN RWTHPSGPLP PQKMVNAENG SHLQATVRVP LDAYMMDFVF SESEEGGMYD NRDGMDYHIP VSDSMAKEPP MHIVHIAVEM APIAKVGGLG
0901: DVVTSLSRAI QDLGHKVEVV FPKYDCLNLS NVKDLHCRQS FTWGGTEIKV WFGKVEGISV YFLEPQNGMF WVGCVYGRND ESRFGFFCHS ALEFLLQSGS
1001: SPDIIHCHDW SSAPVAWLYK QHYVHNGLPN GRVVFTIHNL EFGVHHIGKA MAHCDKATTV SYTYSKEVSG HGSIAPHYFK FHGIRNGIDS DIWDPYNDNF
1101: IPVHYTSENV VEGKSSAKRA LQEKLGLHQT DSPLVGIISR LTAQKGIHLI KHAIYRTLER NGQVVLLGSA PDHRIQGDFS NLASKLHGEF DGRVKLCLTY
1201: DEPLSHLIYA GADFILVPSI FEPCGLTQLT AMRYGSIPIV RKTGGLYDTV FDVDDDKDRA REQGLEPNGF SFEGADSNGV DYALDRAITT WYDARGWFHS
1301: LCKRVMEQDW SWNRPALDYM ELYHSARKN
0001: MEVCWQIQRP ASLRPGFQEK GRVKINTFSV GFFPRSISSI ASLESQYKSN GFLHQITASA DFSRKKQGRM AASGPKSSGP RGFGRRTTVG SAQKRTQKKN
0101: GEKDSNATST ATNEVSGISK LPAAKVDVQK QSSVVLNERN VLDRSDIEDG SDRLDKKTTD DDDLLEQKLK LERENLRRKE IETLAAENLA RGDRMFVYPV
0201: IVKPDEDIEV FLNRNLSTLN NEPDVLIMGA FNEWRWKSFT RRLEKTWIHE DWLSCLLHIP KEAYKMDFVF FNGQSVYDNN DSKDFCVEIK GGMDKVDFEN
0301: FLLEEKLREQ EKLAKEEAER ERQKEEKRRI EAQKAAIEAD RAQAKAETQK RRELLQPAIK KAVVSAENVW YIEPSDFKAE DTVKLYYNKR SGPLTNSKEL
0401: WLHGGFNNWV DGLSIVVKLV NAELKDVDPK SGNWWFAEVV VPGGALVIDW VFADGPPKGA FLYDNNGYQD FHALVPQKLP EELYWLEEEN MIFRKLQEDR
0501: RLKEEVMRAK MEKTARLKAE TKERTLKKFL LSQKDVVYTE PLEIQAGNPV TVLYNPANTV LNGKPEVWFR GSFNRWTHRL GPLPPQKMEA TDDESSHVKT
0601: TAKVPLDAYM MDFVFSEKED GGIFDNKNGL DYHLPVVGGI SKEPPLHIVH IAVEMAPIAK VGGLGDVVTS LSRAVQELNH NVDIVFPKYD CIKHNFVKDL
0701: QFNRSYHWGG TEIKVWHGKV EGLSVYFLDP QNGLFQRGCV YGCADDAGRF GFFCHAALEF LLQGGFHPDI LHCHDWSSAP VSWLFKDHYT QYGLIKTRIV
0801: FTIHNLEFGA NAIGKAMTFA DKATTVSPTY AKEVAGNSVI SAHLYKFHGI INGIDPDIWD PYNDNFIPVP YTSENVVEGK RAAKEELQNR LGLKSADFPV
0901: VGIITRLTHQ KGIHLIKHAI WRTLERNGQV VLLGSAPDPR IQNDFVNLAN QLHSSHGDRA RLVLTYDEPL SHLIYAGADF ILVPSIFEPC GLTQLIAMRY
1001: GAVPVVRKTG GLFDTVFDVD HDKERAQAQV LEPNGFSFDG ADAPGVDYAL NRAISAWYDG REWFNSLCKT VMEQDWSWNR PALEYLELYH SARK
0101: GEKDSNATST ATNEVSGISK LPAAKVDVQK QSSVVLNERN VLDRSDIEDG SDRLDKKTTD DDDLLEQKLK LERENLRRKE IETLAAENLA RGDRMFVYPV
0201: IVKPDEDIEV FLNRNLSTLN NEPDVLIMGA FNEWRWKSFT RRLEKTWIHE DWLSCLLHIP KEAYKMDFVF FNGQSVYDNN DSKDFCVEIK GGMDKVDFEN
0301: FLLEEKLREQ EKLAKEEAER ERQKEEKRRI EAQKAAIEAD RAQAKAETQK RRELLQPAIK KAVVSAENVW YIEPSDFKAE DTVKLYYNKR SGPLTNSKEL
0401: WLHGGFNNWV DGLSIVVKLV NAELKDVDPK SGNWWFAEVV VPGGALVIDW VFADGPPKGA FLYDNNGYQD FHALVPQKLP EELYWLEEEN MIFRKLQEDR
0501: RLKEEVMRAK MEKTARLKAE TKERTLKKFL LSQKDVVYTE PLEIQAGNPV TVLYNPANTV LNGKPEVWFR GSFNRWTHRL GPLPPQKMEA TDDESSHVKT
0601: TAKVPLDAYM MDFVFSEKED GGIFDNKNGL DYHLPVVGGI SKEPPLHIVH IAVEMAPIAK VGGLGDVVTS LSRAVQELNH NVDIVFPKYD CIKHNFVKDL
0701: QFNRSYHWGG TEIKVWHGKV EGLSVYFLDP QNGLFQRGCV YGCADDAGRF GFFCHAALEF LLQGGFHPDI LHCHDWSSAP VSWLFKDHYT QYGLIKTRIV
0801: FTIHNLEFGA NAIGKAMTFA DKATTVSPTY AKEVAGNSVI SAHLYKFHGI INGIDPDIWD PYNDNFIPVP YTSENVVEGK RAAKEELQNR LGLKSADFPV
0901: VGIITRLTHQ KGIHLIKHAI WRTLERNGQV VLLGSAPDPR IQNDFVNLAN QLHSSHGDRA RLVLTYDEPL SHLIYAGADF ILVPSIFEPC GLTQLIAMRY
1001: GAVPVVRKTG GLFDTVFDVD HDKERAQAQV LEPNGFSFDG ADAPGVDYAL NRAISAWYDG REWFNSLCKT VMEQDWSWNR PALEYLELYH SARK
Arabidopsis Description
ATSS3SS3 [Source:UniProtKB/TrEMBL;Acc:A0A178W4M9]
SUBAcon: [mitochondrion,plastid]
SUBAcon: [mitochondrion,plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.