Factsheet for HORVU1Hr1G080950.5

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 4
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	cytosol
TargetP:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1A01G353300.1	Wheat	cytosol	69.56	96.94
TraesCS1B01G368500.1	Wheat	plastid	89.33	93.54
TraesCS1D01G356900.1	Wheat	plastid	89.23	93.43
OQU78343	Sorghum	plastid	73.54	77.34
Zm00001d010821_P002	Maize	plastid	72.28	76.02
GSMUA_Achr3P16350_001	Banana	endoplasmic reticulum, vacuole	16.53	71.49
Os01t0720600-01	Rice	plastid	63.18	61.95
GSMUA_Achr8P27560_001	Banana	plastid	54.08	55.0
KRH58438	Soybean	nucleus	55.23	53.39
KRH42312	Soybean	nucleus	54.81	52.93
VIT_10s0003g02880.t01	Wine grape	plastid	55.86	52.82
GSMUA_Achr3P16340_001	Banana	plastid	40.27	52.52
PGSC0003DMT400021444	Potato	plastid	54.5	52.05
Solyc02g071040.2.1	Tomato	nucleus	54.08	51.65
Bra021017.1-P	Field mustard	plastid	53.56	50.2
CDX76534	Canola	plastid	53.45	50.1
CDY08902	Canola	plastid	52.82	49.51
AT4G18240.1	Thale cress	plastid	53.56	49.23
HORVU7Hr1G025390.4	Barley	cytosol, plastid	16.95	28.17
HORVU2Hr1G090980.3	Barley	plastid	16.63	26.81
HORVU6Hr1G075950.4	Barley	plastid	17.68	25.04
HORVU7Hr1G012380.5	Barley	plastid	15.69	24.88
HORVU1Hr1G035960.19	Barley	cytosol, plastid	18.2	21.67
HORVU7Hr1G038420.1	Barley	plastid	18.31	20.44
HORVU2Hr1G106410.9	Barley	cytosol	27.2	19.56
HORVU1Hr1G021590.5	Barley	mitochondrion	26.67	16.01
HORVU0Hr1G005550.1	Barley	cytosol	0.84	4.08
HORVU0Hr1G005540.2	Barley	cytosol	3.87	3.65

Protein Annotations

KEGG:00500+2.4.1.21	MapMan:3.2.2.4.4	Gene3D:3.40.50.2000	UniProt:A0A287GGJ8	ncoils:Coil	GO:GO:0003674
GO:GO:0003824	GO:GO:0004373	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005975	GO:GO:0005982	GO:GO:0008150	GO:GO:0008152	GO:GO:0009011	GO:GO:0009058
GO:GO:0009501	GO:GO:0009507	GO:GO:0009536	GO:GO:0009987	GO:GO:0016740	GO:GO:0016757
GO:GO:0019252	InterPro:GS/SS	InterPro:Glyco_trans_1	EnsemblPlantsGene:HORVU1Hr1G080950	EnsemblPlants:HORVU1Hr1G080950.5	HAMAP:MF_00484
PFAM:PF00534	PFAM:PF08323	PANTHER:PTHR12526	PANTHER:PTHR12526:SF539	SUPFAM:SSF101447	SUPFAM:SSF53756
InterPro:Starch_synth_cat_dom	TIGRFAMs:TIGR02095	UniParc:UPI000B46D8C3	SEG:seg	:	:

Description

Starch synthase, chloroplastic/amyloplastic [Source:UniProtKB/TrEMBL;Acc:A0A287GGJ8]

Coordinates

chrchr1H:+:526699089..526705975

Molecular Weight (calculated)

107504.0 Da

IEP (calculated)

6.517

GRAVY (calculated)

-0.369

Length

956 amino acids

Sequence
(BLAST)

001: PRPPPPPPPP PPPPVHHHSS TSLHSPPLST LQPPPTPTPP LAPFPMACSA AEATTALLPP RCPAPSPLDG RRLSLPCRAR HRTLTLRAAA QQRPQRSTAG
101: ADHLNTAANV RSDEAAVSAE KERQRKYSDG DGISNLQLED LVEMIQNTEK NILLLNQARL QAMERADKIL KEKEALQRKI SILETRLSET DAQHKLSSEG
201: NFSESPLALE FDVLKEENIL LKEDIEFFKS KLIEVAKTEE GIFKLEKERA LLDASLRELE SRFIAAQADM MKLGPRDAWW EKVEKLEDLL ETTANQVERA
301: AVILDNNHDL QDKLDKLVAS LQAANISKFS SSLVDLLQQK VKLVEERFQA CNREMHSQIK LYEHSIVEFH DTLSKLIEES EKRSLENFTG NMPSELWSKI
401: SLLIDGWLLE KKISYNDASL LREMVRKRDS RLREAYLSYR GTENREVMDN FLKMALPGTS SGLHIAHIAA EMAPVAKVGG LADVISGLGK ALQKKGHLVE
501: IILPKYDCMQ VDQVSNLKVL DVPVQSYFEG NMFDNKIWTG TVEGLPVYFI EPQHPAMFFS RAQYYGEHDD FKRFTYFSRA ALELLYQSGK KVDIIHCHDW
601: QTAFVAPLYW DVYANLGFNS ARICFTCHNF EYQGTAPARD LAWCGLDVEH LDRPDRMRDN SHGRINAVKG AVVYSNIVTT VSPTYALEVL SQGGRGLQDT
701: LKVHSRKFLG ILNGIDTDTW NPSTDRYLKV QYNAKDLQGK AANKAALREQ LNLASAYPSQ PLVGCITRLV AQKGVHLIRH AIYKTAELGG QFVLLGSSPV
801: PEIQREFEGI ADHFQDNNNI RLILKYDDAL SHCIYAASDM FIVPSIFEPC GLTQMIAMRY GSVPIVRKTG GLNDSVFDFD DETIPVEVRN GFTFVKADEQ
901: GLSSAMERAF NCYTRKPEVW KQLVQKDMTI DFSWDTSASQ YEDIYQKAVA RARAAA

Best Arabidopsis Sequence Match ( AT4G18240.1 )
(BLAST)

0001: MTTKLSSFCF LTHGLAGISC EREHGSSRRF FYLPSRRLVS TSCKMRQQRG FDSSKRQEVK KGSPKPILSI NSGLQSNNDE ESDLENGSAD SVPSLKSDAE
0101: KGSSIHGSID MNHADENLEK KDDIQTTEVT RRKSKTAKKK GESIHATIDI GHDDGKNLDN ITVPEVAKAL SLNKSEGEQI SDGQFGELMT MIRSAEKNIL
0201: RLDEARATAL DDLNKILSDK EALQGEINVL EMKLSETDER IKTAAQEKAH VELLEEQLEK LRHEMISPIE SDGYVLALSK ELETLKLENL SLRNDIEMLK
0301: SELDSVKDTG ERVVVLEKEC SGLESSVKDL ESKLSVSQED VSQLSTLKIE CTDLWAKVET LQLLLDRATK QAEQAVIVLQ QNQDLRNKVD KIEESLKEAN
0401: VYKESSEKIQ QYNELMQHKV TLLEERLEKS DAEIFSYVQL YQESIKEFQE TLESLKEESK KKSRDEPVDD MPWDYWSRLL LTVDGWLLEK KIASNDADLL
0501: RDMVWKKDRR IHDTYIDVKD KNERDAISAF LKLVSSPTSS GLYVVHIAAE MAPVAKVGGL GDVVAGLGKA LQRKGHLVEI ILPKYDCMQY DRVRDLRALD
0601: TVVESYFDGK LYKNKIWIGT VEGLPVHFIE PQHPSKFFWR GQFYGEQDDF RRFSYFSRAA LELLLQSGKK PDIIHCHDWQ TAFVAPLYWD LYAPKGLDSA
0701: RICFTCHNFE YQGTASASEL GSCGLDVNQL NRPDRMQDHS SGDRVNPVKG AIIFSNIVTT VSPTYAQEVR TAEGGKGLHS TLNFHSKKFI GILNGIDTDS
0801: WNPATDPFLK AQFNAKDLQG KEENKHALRK QLGLSSAESR RPLVGCITRL VPQKGVHLIR HAIYRTLELG GQFVLLGSSP VPHIQREFEG IEQQFKSHDH
0901: VRLLLKYDEA LSHTIYAASD LFIIPSIFEP CGLTQMIAMR YGSIPIARKT GGLNDSVFDI DDDTIPTQFQ NGFTFQTADE QGFNYALERA FNHYKKDEEK
1001: WMRLVEKVMS IDFSWGSSAT QYEELYTRSV SRARAVPNRT

Arabidopsis Description

SS4Probable starch synthase 4, chloroplastic/amyloplastic [Source:UniProtKB/Swiss-Prot;Acc:Q0WVX5]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.