Factsheet for Os01t0720600-01

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 10

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1A01G353300.1	Wheat	cytosol	51.49	73.18
GSMUA_Achr3P16350_001	Banana	endoplasmic reticulum, vacuole	15.59	68.78
OQU78343	Sorghum	plastid	62.36	66.89
Os05t0533600-02	Rice	plastid	62.87	66.7
TraesCS1D01G356900.1	Wheat	plastid	62.26	66.48
TraesCS1B01G368500.1	Wheat	plastid	61.64	65.83
Zm00001d010821_P002	Maize	plastid	60.92	65.35
HORVU1Hr1G080950.5	Barley	plastid	61.95	63.18
GSMUA_Achr8P27560_001	Banana	plastid	52.82	54.79
KRH58438	Soybean	nucleus	53.64	52.88
KRH42312	Soybean	nucleus	53.13	52.32
VIT_10s0003g02880.t01	Wine grape	plastid	53.85	51.93
GSMUA_Achr3P16340_001	Banana	plastid	38.87	51.71
Solyc02g071040.2.1	Tomato	nucleus	52.92	51.55
PGSC0003DMT400021444	Potato	plastid	52.92	51.55
CDX76534	Canola	plastid	51.49	49.22
CDY08902	Canola	plastid	51.49	49.22
Bra021017.1-P	Field mustard	plastid	51.28	49.02
AT4G18240.1	Thale cress	plastid	51.59	48.37
Os06t0160700-01	Rice	plastid	17.74	26.99
Os07t0412100-01	Rice	plastid	16.82	26.97
Os06t0133000-02	Rice	plastid	16.1	25.78
Os02t0744700-01	Rice	nucleus	16.51	23.78
Os02t0807100-01	Rice	plastid	7.38	23.23
Os10t0437600-00	Rice	plastid	17.13	22.3
Os06t0229800-01	Rice	plastid	17.85	21.48
Os04t0624600-01	Rice	plastid	26.67	21.38
Os08t0191433-01	Rice	plastid	25.23	15.84

Protein Annotations

KEGG:00500+2.4.1.21	MapMan:3.2.2.4.4	Gene3D:3.40.50.2000	EntrezGene:4324654	EMBL:AY373257	ProteinID:BAD87397.1
ProteinID:BAD87398.1	ProteinID:BAF06005.1	ProteinID:BAS74075.1	ProteinID:BAS74076.1	ncoils:Coil	GO:GO:0003674
GO:GO:0003824	GO:GO:0004373	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005975	GO:GO:0008150	GO:GO:0008152	GO:GO:0009011	GO:GO:0009058	GO:GO:0009501
GO:GO:0009507	GO:GO:0009536	GO:GO:0009987	GO:GO:0016740	GO:GO:0016757	GO:GO:0019252
InterPro:GS/SS	InterPro:Glyco_trans_1	HAMAP:MF_00484	EnsemblPlantsGene:Os01g0720600	EnsemblPlants:Os01t0720600-01	PFAM:PF00534
PFAM:PF08323	PANTHER:PTHR12526	PANTHER:PTHR12526:SF539	UniProt:Q5JMA1	SUPFAM:SSF53756	InterPro:Starch_synth_cat_dom
TIGRFAMs:TIGR02095	UniParc:UPI00004C297F	RefSeq:XP_015648269.1	RefSeq:XP_015648277.1	SEG:seg	:

Description

SOLUBLE STARCH SYNTHASE IVASimilar to Starch synthase IV. (Os01t0720600-01);Starch synthase, Starch biosynthesis (Os01t0720600-02);Similar to starch synthase IV. (Os01t0720600-03);Starch synthase, Starch biosynthesis (Os01t0720600-04)

Coordinates

chr1:-:30032433..30041425

Molecular Weight (calculated)

109896.0 Da

IEP (calculated)

5.917

GRAVY (calculated)

-0.352

Length

975 amino acids

Sequence
(BLAST)

001: MAACGAAAAE YSALLSLSCG PITRRRFAVS CRARPPGNLS AQQKKKRGKN IAPKQRSSNA KLLLTTEENG QLPSTSLRTS MERPQKSTSS EDDTNGAISQ
101: IDEKIAAIGN EQQERSKDKH FESDFQLEDF GEMIQNMEKN ILLLNQARLQ AIEDVDKILT EKEALQKKVD TLEMNLSKAL ATKGNINTDI PGDHLEKFTK
201: EILIESALSG GNPAHLCESP LFMELTVLKE ENMLLKADAQ FLKAKIVEFA ETEEFLFKLE KERSLLDATV RELEARFLVA QTDIWKVVPL QYDVWMEKVE
301: NLQHMLGCLK NHVEKYAALL DQHDDLHDKI DELEASLKEG KTSEFSPYVV ELLQQKLKAA KSHHQAGHQE TNTHIQVYQQ LTEEFQDNLG KLIEESGRLE
401: HSANSMPSEF WSHILLMIDG WFLERKIPNT DARMLREMAW KRDDRICEAY FACKGAKESD VMETFLKLSL SGNSQCSSGL HIVHIAAEMA PVAKVGGLAD
501: VVAGLGKALQ TKGHLVEIVL PKYDCMQLDQ ITNLKVLDVV IQSYFDGNLF SNNVWTGTVE GLPVYFIEPQ HPSKFFWRAQ YYGEHDDFKR YSYFSRAALE
601: LLYQSGKKID IIHCHDWQTA FVAPLYWDIY ATRGFSSARI CFTCHNFEYQ GTAPAPDLSY CGLDVEQLDR PDRMQDNAHG RINVAKGGIV YSNIVTTVSP
701: TYALEVRSEG GRGLQDTLKM HSRKFVGILN GIDTGTWNPS TDRFLAVQYS ATDLQGKAAN KAFLRKQLGL YSEDASQPLV ACITRLVPQK GLHLIRHAIY
801: KTAELGGQFV LLGSSPVPHI QREFEGVADQ FQKNNNIRLI LKYDEALSHC IYAASDMFII PSMFEPCGLT QMIAMRYGSV PIVRQTGGLC DSVFDFDDET
901: IPVELRNGFT FARTDEQDLS SCLERAFSYY SRKPMVWKQL VQKDMQIDFS WDSPASQYEN LYQSAVAQAR GAAQT

Best Arabidopsis Sequence Match ( AT4G18240.1 )
(BLAST)

0001: MTTKLSSFCF LTHGLAGISC EREHGSSRRF FYLPSRRLVS TSCKMRQQRG FDSSKRQEVK KGSPKPILSI NSGLQSNNDE ESDLENGSAD SVPSLKSDAE
0101: KGSSIHGSID MNHADENLEK KDDIQTTEVT RRKSKTAKKK GESIHATIDI GHDDGKNLDN ITVPEVAKAL SLNKSEGEQI SDGQFGELMT MIRSAEKNIL
0201: RLDEARATAL DDLNKILSDK EALQGEINVL EMKLSETDER IKTAAQEKAH VELLEEQLEK LRHEMISPIE SDGYVLALSK ELETLKLENL SLRNDIEMLK
0301: SELDSVKDTG ERVVVLEKEC SGLESSVKDL ESKLSVSQED VSQLSTLKIE CTDLWAKVET LQLLLDRATK QAEQAVIVLQ QNQDLRNKVD KIEESLKEAN
0401: VYKESSEKIQ QYNELMQHKV TLLEERLEKS DAEIFSYVQL YQESIKEFQE TLESLKEESK KKSRDEPVDD MPWDYWSRLL LTVDGWLLEK KIASNDADLL
0501: RDMVWKKDRR IHDTYIDVKD KNERDAISAF LKLVSSPTSS GLYVVHIAAE MAPVAKVGGL GDVVAGLGKA LQRKGHLVEI ILPKYDCMQY DRVRDLRALD
0601: TVVESYFDGK LYKNKIWIGT VEGLPVHFIE PQHPSKFFWR GQFYGEQDDF RRFSYFSRAA LELLLQSGKK PDIIHCHDWQ TAFVAPLYWD LYAPKGLDSA
0701: RICFTCHNFE YQGTASASEL GSCGLDVNQL NRPDRMQDHS SGDRVNPVKG AIIFSNIVTT VSPTYAQEVR TAEGGKGLHS TLNFHSKKFI GILNGIDTDS
0801: WNPATDPFLK AQFNAKDLQG KEENKHALRK QLGLSSAESR RPLVGCITRL VPQKGVHLIR HAIYRTLELG GQFVLLGSSP VPHIQREFEG IEQQFKSHDH
0901: VRLLLKYDEA LSHTIYAASD LFIIPSIFEP CGLTQMIAMR YGSIPIARKT GGLNDSVFDI DDDTIPTQFQ NGFTFQTADE QGFNYALERA FNHYKKDEEK
1001: WMRLVEKVMS IDFSWGSSAT QYEELYTRSV SRARAVPNRT

Arabidopsis Description

SS4Probable starch synthase 4, chloroplastic/amyloplastic [Source:UniProtKB/Swiss-Prot;Acc:Q0WVX5]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.