Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
plastid:
27992503
|
msms PMID:
27992503
doi
Department of Biochemistry, Molecular Biology, Entomology and Plant Pathology, Mississippi State University, Starkville, Mississippi, United States of America., Institute of Food Crops, Jiangsu Academy of Agricultural Sciences, Jiangsu High Quality Rice Research and Development Center, Nanjing Branch of China National Center for Rice Improvement, Nanjing, Jiangsu, China.
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr11P... | Banana | cytosol, mitochondrion, plastid | 11.53 | 76.82 |
| Bra019836.1-P | Field mustard | endoplasmic reticulum, vacuole | 22.79 | 70.66 |
| Os04t0624600-01 | Rice | plastid | 47.97 | 61.27 |
| TraesCS1B01G119300.1 | Wheat | plastid | 57.89 | 55.84 |
| KRH51091 | Soybean | plastid | 38.89 | 55.82 |
| HORVU1Hr1G021590.5 | Barley | mitochondrion | 57.24 | 55.81 |
| TraesCS1D01G100100.1 | Wheat | cytosol | 57.95 | 55.8 |
| CDY49799 | Canola | mitochondrion | 38.7 | 55.39 |
| TraesCS1A01G091500.1 | Wheat | plastid | 57.89 | 55.19 |
| CDY31209 | Canola | plastid | 37.99 | 55.04 |
| AT1G11720.2 | Thale cress | mitochondrion, plastid | 38.57 | 54.75 |
| KRH20852 | Soybean | plastid | 40.5 | 54.74 |
| CDX97980 | Canola | plastid | 38.38 | 54.63 |
| KRH11434 | Soybean | plastid | 40.05 | 53.34 |
| GSMUA_Achr5P00700_001 | Banana | plastid | 38.18 | 52.95 |
| Zm00001d000002_P002 | Maize | plastid | 56.47 | 52.3 |
| KXG24650 | Sorghum | plastid | 56.41 | 52.02 |
| Solyc02g080570.2.1 | Tomato | nucleus, plastid | 40.76 | 51.46 |
| Bra016818.1-P | Field mustard | cytosol | 38.25 | 45.24 |
| GSMUA_Achr11P... | Banana | plastid | 28.98 | 44.25 |
| VIT_10s0116g01730.t01 | Wine grape | plastid | 40.95 | 41.62 |
| Os05t0533600-02 | Rice | plastid | 15.58 | 26.33 |
| Os01t0720600-01 | Rice | plastid | 15.84 | 25.23 |
| Os02t0744700-01 | Rice | nucleus | 10.5 | 24.08 |
| Os06t0160700-01 | Rice | plastid | 9.79 | 23.71 |
| Os07t0412100-01 | Rice | plastid | 9.08 | 23.19 |
| Os06t0133000-02 | Rice | plastid | 9.01 | 22.99 |
| Os10t0437600-00 | Rice | plastid | 9.79 | 20.29 |
| Os06t0229800-01 | Rice | plastid | 9.79 | 18.77 |
| Os02t0807100-01 | Rice | plastid | 3.16 | 15.81 |
Protein Annotations
| KEGG:00500+2.4.1.21 | Gene3D:2.60.40.10 | MapMan:3.2.2.4.3 | Gene3D:3.40.50.2000 | InterPro:CBM25 | ncoils:Coil |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004373 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005975 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009011 |
| GO:GO:0009058 | GO:GO:0009507 | GO:GO:0009536 | GO:GO:0009987 | GO:GO:0016740 | GO:GO:0019252 |
| GO:GO:0030246 | GO:GO:2001070 | InterPro:GS/SS | InterPro:Glyco_trans_1 | InterPro:IPR013783 | InterPro:Ig-like_fold |
| HAMAP:MF_00484 | EnsemblPlantsGene:Os08g0191433 | EnsemblPlants:Os08t0191433-01 | PFAM:PF00534 | PFAM:PF08323 | PFAM:PF16760 |
| PANTHER:PTHR12526 | PANTHER:PTHR12526:SF345 | SMART:SM01066 | SUPFAM:SSF53756 | InterPro:Starch_synth_cat_dom | UniParc:UPI0001BBED88 |
| SEG:seg | : | : | : | : | : |
Description
FLOURY ENDOSPERM 5Starch synthase, Starch biosynthesis (Os08t0191433-01)
Coordinates
chr8:+:5353697..5363276
Molecular Weight (calculated)
174950.0 Da
IEP (calculated)
4.763
GRAVY (calculated)
-0.474
Length
1553 amino acids
Sequence
(BLAST)
(BLAST)
0001: MDSLALHSVT MGKVDAINAA GAEGDKFEVD LSALASNNSM IEAVNVMDEA KAIEDTLEVD LSGNATSSST YGEVKFEVDS LGNTSSTVMY GPADGAYEPR
0101: SDEVTFKVDS SENASNNVMY GRADVVDESW ADEGIFEVDF FTNASSGAEY GKVDVVDEAK TDDFTFEIDS LEKDSNNKMH GKAHMVDEAW DDEAIFEVDL
0201: FGNASSIPIY GEVNVLDEAR ADDGKFEVDL LGNTSSNSTH EEVDVVDEAQ TGEATFEVDL LGNALSSAIY KEVPVMGGAQ DDEVDVDFSI NASITETEKE
0301: ADAVDEARVE DETFDMDLVG KQISIDSMND DVVEEGTKHH RYPMLSSAFI EVKTIHETPV SLKPELMSVV MDQEQDKPIS SVYQQEGSIF NLHAENQSTV
0401: DFHEREQMAI TFDKQKESVA KLSKEDQQTA GLPEQNMSFD GVHRKSQSII GLPFQHQSIV SSPEKYRSIV GFHGQNQSII SSHKQDKSIV GVPKKIQSIV
0501: GSTKHDDSIV GFRKQDRSIV SVPEQKQSIV GFHKQDLSIV AVSEQNLSIV AIPRESQSKQ ISIVRRHDPL HLKEVETKDR DGISKKSGGD DDLPHMLFEE
0601: ELSQVEDVAR AIAYKKQHEV DVISLTPDIQ ESPQDNIDPQ ELRRMLQELA DQNCSMGNKL FVFPEAVKAN STIDVYLNRN LSALANEPDV HIKGAFNSWR
0701: WRPFTERLHK SELSGDWWSC KLHIPKEAYR LDFVFFNGRL VYDNNDSNDF VLQVESTMDE DSFEEFLVEE KKRELERVAT EEAERRRHAE EQQRMGEQRA
0801: AEQAAREQAK KEIELKKNKL QNLLSSARTH VDNLWHIEPS TYRQGDTVRL YYNRNSRPLM HSTEIWMHGG CNSWTDGLSI VERLVECDDE NGDWWYANVH
0901: IPEKAFVLDW VFADGPPGNA RNYDNNGRQD FHAILPNAMT NEEYWVEEEN CIYTRLLHEI REREEAIKIK VEKRAKMKSE MKEKTMRMFL LSQKHIVYTE
1001: PLEIRAGTTV DVLYNPSNTV LNGKPEVWFR WSFNRWMHPS GVLPPKKMVK TEDGCHLKAT VSVPSDAYMM DFVFSESEEG GIYDNRNGTD YHIPVSGSNA
1101: KEPPIHIVHI AVEMAPIAKV GGLADVVTSL SRAIQELGHH VEVILPKYNF MNQSNVKNLH VRQSFSLGGT EIKVWFGLVE DLSVYFLEPQ NGMFGGGWVY
1201: GGNDAGRFGL FCQSALEFLL QSGSSPHIIH CHDWSSAPVA WLYKEHYAES RLATARIIFT IHNLEFGAHF IGKAMTYCDK ATTVSHTYSK EVAGHGAIAP
1301: HRGKFYGILN GIDPDIWDPY TDNFIPMHYT SENVVEGKNA AKRALQQRFG LQQTDVPIVG IITRLTAQKG IHLIKHALHR TLERNGQVVL LGSAPDPRIQ
1401: SDFCRLADSL HGENHGRVRL CLTYDEPLSH LIYAGSDFIL VPSIFEPCGL TQLVAMRYGS IPIVRKTGGL YDTVFDVDHD KDRARVLGLE PNGFSFDGAD
1501: CNGVDYALNR AISSWFEARG WFHSLCKRVM EQDWSWNRPA LDYIELYHSA HKF
0101: SDEVTFKVDS SENASNNVMY GRADVVDESW ADEGIFEVDF FTNASSGAEY GKVDVVDEAK TDDFTFEIDS LEKDSNNKMH GKAHMVDEAW DDEAIFEVDL
0201: FGNASSIPIY GEVNVLDEAR ADDGKFEVDL LGNTSSNSTH EEVDVVDEAQ TGEATFEVDL LGNALSSAIY KEVPVMGGAQ DDEVDVDFSI NASITETEKE
0301: ADAVDEARVE DETFDMDLVG KQISIDSMND DVVEEGTKHH RYPMLSSAFI EVKTIHETPV SLKPELMSVV MDQEQDKPIS SVYQQEGSIF NLHAENQSTV
0401: DFHEREQMAI TFDKQKESVA KLSKEDQQTA GLPEQNMSFD GVHRKSQSII GLPFQHQSIV SSPEKYRSIV GFHGQNQSII SSHKQDKSIV GVPKKIQSIV
0501: GSTKHDDSIV GFRKQDRSIV SVPEQKQSIV GFHKQDLSIV AVSEQNLSIV AIPRESQSKQ ISIVRRHDPL HLKEVETKDR DGISKKSGGD DDLPHMLFEE
0601: ELSQVEDVAR AIAYKKQHEV DVISLTPDIQ ESPQDNIDPQ ELRRMLQELA DQNCSMGNKL FVFPEAVKAN STIDVYLNRN LSALANEPDV HIKGAFNSWR
0701: WRPFTERLHK SELSGDWWSC KLHIPKEAYR LDFVFFNGRL VYDNNDSNDF VLQVESTMDE DSFEEFLVEE KKRELERVAT EEAERRRHAE EQQRMGEQRA
0801: AEQAAREQAK KEIELKKNKL QNLLSSARTH VDNLWHIEPS TYRQGDTVRL YYNRNSRPLM HSTEIWMHGG CNSWTDGLSI VERLVECDDE NGDWWYANVH
0901: IPEKAFVLDW VFADGPPGNA RNYDNNGRQD FHAILPNAMT NEEYWVEEEN CIYTRLLHEI REREEAIKIK VEKRAKMKSE MKEKTMRMFL LSQKHIVYTE
1001: PLEIRAGTTV DVLYNPSNTV LNGKPEVWFR WSFNRWMHPS GVLPPKKMVK TEDGCHLKAT VSVPSDAYMM DFVFSESEEG GIYDNRNGTD YHIPVSGSNA
1101: KEPPIHIVHI AVEMAPIAKV GGLADVVTSL SRAIQELGHH VEVILPKYNF MNQSNVKNLH VRQSFSLGGT EIKVWFGLVE DLSVYFLEPQ NGMFGGGWVY
1201: GGNDAGRFGL FCQSALEFLL QSGSSPHIIH CHDWSSAPVA WLYKEHYAES RLATARIIFT IHNLEFGAHF IGKAMTYCDK ATTVSHTYSK EVAGHGAIAP
1301: HRGKFYGILN GIDPDIWDPY TDNFIPMHYT SENVVEGKNA AKRALQQRFG LQQTDVPIVG IITRLTAQKG IHLIKHALHR TLERNGQVVL LGSAPDPRIQ
1401: SDFCRLADSL HGENHGRVRL CLTYDEPLSH LIYAGSDFIL VPSIFEPCGL TQLVAMRYGS IPIVRKTGGL YDTVFDVDHD KDRARVLGLE PNGFSFDGAD
1501: CNGVDYALNR AISSWFEARG WFHSLCKRVM EQDWSWNRPA LDYIELYHSA HKF
0001: MEVCWQIQRP ASLRPGFQEK GRVKINTFSV GFFPRSISSI ASLESQYKSN GFLHQITASA DFSRKKQGRM AASGPKSSGP RGFGRRTTVG SAQKRTQKKN
0101: GEKDSNATST ATNEVSGISK LPAAKVDVQK QSSVVLNERN VLDRSDIEDG SDRLDKKTTD DDDLLEQKLK LERENLRRKE IETLAAENLA RGDRMFVYPV
0201: IVKPDEDIEV FLNRNLSTLN NEPDVLIMGA FNEWRWKSFT RRLEKTWIHE DWLSCLLHIP KEAYKMDFVF FNGQSVYDNN DSKDFCVEIK GGMDKVDFEN
0301: FLLEEKLREQ EKLAKEEAER ERQKEEKRRI EAQKAAIEAD RAQAKAETQK RRELLQPAIK KAVVSAENVW YIEPSDFKAE DTVKLYYNKR SGPLTNSKEL
0401: WLHGGFNNWV DGLSIVVKLV NAELKDVDPK SGNWWFAEVV VPGGALVIDW VFADGPPKGA FLYDNNGYQD FHALVPQKLP EELYWLEEEN MIFRKLQEDR
0501: RLKEEVMRAK MEKTARLKAE TKERTLKKFL LSQKDVVYTE PLEIQAGNPV TVLYNPANTV LNGKPEVWFR GSFNRWTHRL GPLPPQKMEA TDDESSHVKT
0601: TAKVPLDAYM MDFVFSEKED GGIFDNKNGL DYHLPVVGGI SKEPPLHIVH IAVEMAPIAK VGGLGDVVTS LSRAVQELNH NVDIVFPKYD CIKHNFVKDL
0701: QFNRSYHWGG TEIKVWHGKV EGLSVYFLDP QNGLFQRGCV YGCADDAGRF GFFCHAALEF LLQGGFHPDI LHCHDWSSAP VSWLFKDHYT QYGLIKTRIV
0801: FTIHNLEFGA NAIGKAMTFA DKATTVSPTY AKEVAGNSVI SAHLYKFHGI INGIDPDIWD PYNDNFIPVP YTSENVVEGK RAAKEELQNR LGLKSADFPV
0901: VGIITRLTHQ KGIHLIKHAI WRTLERNGQV VLLGSAPDPR IQNDFVNLAN QLHSSHGDRA RLVLTYDEPL SHLIYAGADF ILVPSIFEPC GLTQLIAMRY
1001: GAVPVVRKTG GLFDTVFDVD HDKERAQAQV LEPNGFSFDG ADAPGVDYAL NRAISAWYDG REWFNSLCKT VMEQDWSWNR PALEYLELYH SARK
0101: GEKDSNATST ATNEVSGISK LPAAKVDVQK QSSVVLNERN VLDRSDIEDG SDRLDKKTTD DDDLLEQKLK LERENLRRKE IETLAAENLA RGDRMFVYPV
0201: IVKPDEDIEV FLNRNLSTLN NEPDVLIMGA FNEWRWKSFT RRLEKTWIHE DWLSCLLHIP KEAYKMDFVF FNGQSVYDNN DSKDFCVEIK GGMDKVDFEN
0301: FLLEEKLREQ EKLAKEEAER ERQKEEKRRI EAQKAAIEAD RAQAKAETQK RRELLQPAIK KAVVSAENVW YIEPSDFKAE DTVKLYYNKR SGPLTNSKEL
0401: WLHGGFNNWV DGLSIVVKLV NAELKDVDPK SGNWWFAEVV VPGGALVIDW VFADGPPKGA FLYDNNGYQD FHALVPQKLP EELYWLEEEN MIFRKLQEDR
0501: RLKEEVMRAK MEKTARLKAE TKERTLKKFL LSQKDVVYTE PLEIQAGNPV TVLYNPANTV LNGKPEVWFR GSFNRWTHRL GPLPPQKMEA TDDESSHVKT
0601: TAKVPLDAYM MDFVFSEKED GGIFDNKNGL DYHLPVVGGI SKEPPLHIVH IAVEMAPIAK VGGLGDVVTS LSRAVQELNH NVDIVFPKYD CIKHNFVKDL
0701: QFNRSYHWGG TEIKVWHGKV EGLSVYFLDP QNGLFQRGCV YGCADDAGRF GFFCHAALEF LLQGGFHPDI LHCHDWSSAP VSWLFKDHYT QYGLIKTRIV
0801: FTIHNLEFGA NAIGKAMTFA DKATTVSPTY AKEVAGNSVI SAHLYKFHGI INGIDPDIWD PYNDNFIPVP YTSENVVEGK RAAKEELQNR LGLKSADFPV
0901: VGIITRLTHQ KGIHLIKHAI WRTLERNGQV VLLGSAPDPR IQNDFVNLAN QLHSSHGDRA RLVLTYDEPL SHLIYAGADF ILVPSIFEPC GLTQLIAMRY
1001: GAVPVVRKTG GLFDTVFDVD HDKERAQAQV LEPNGFSFDG ADAPGVDYAL NRAISAWYDG REWFNSLCKT VMEQDWSWNR PALEYLELYH SARK
Arabidopsis Description
ATSS3SS3 [Source:UniProtKB/TrEMBL;Acc:A0A178W4M9]
SUBAcon: [mitochondrion,plastid]
SUBAcon: [mitochondrion,plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.