Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1A01G091500.1 | Wheat | plastid | 96.34 | 95.4 |
| TraesCS1B01G119300.1 | Wheat | plastid | 94.42 | 94.6 |
| HORVU1Hr1G021590.5 | Barley | mitochondrion | 88.78 | 89.89 |
| GSMUA_Achr11P... | Banana | cytosol, mitochondrion, plastid | 10.91 | 75.54 |
| Bra019836.1-P | Field mustard | endoplasmic reticulum, vacuole | 21.2 | 68.26 |
| Os08t0191433-01 | Rice | plastid | 55.8 | 57.95 |
| TraesCS2D01G468900.2 | Wheat | endoplasmic reticulum, golgi | 49.16 | 56.52 |
| CDY49799 | Canola | mitochondrion | 37.57 | 55.85 |
| KRH51091 | Soybean | plastid | 37.38 | 55.73 |
| CDX97980 | Canola | plastid | 37.57 | 55.55 |
| CDY31209 | Canola | plastid | 36.89 | 55.5 |
| KRH20852 | Soybean | plastid | 39.37 | 55.27 |
| AT1G11720.2 | Thale cress | mitochondrion, plastid | 37.45 | 55.21 |
| KXG24650 | Sorghum | plastid | 57.47 | 55.05 |
| Zm00001d000002_P002 | Maize | plastid | 56.79 | 54.62 |
| GSMUA_Achr5P00700_001 | Banana | plastid | 37.57 | 54.11 |
| KRH11434 | Soybean | plastid | 39.0 | 53.95 |
| Solyc02g080570.2.1 | Tomato | nucleus, plastid | 39.55 | 51.87 |
| GSMUA_Achr11P... | Banana | plastid | 29.26 | 46.41 |
| Bra016818.1-P | Field mustard | cytosol | 36.76 | 45.16 |
| VIT_10s0116g01730.t01 | Wine grape | plastid | 40.61 | 42.87 |
| TraesCS1D01G356900.1 | Wheat | plastid | 15.25 | 26.94 |
| TraesCS2D01G369800.1 | Wheat | plastid | 9.24 | 24.87 |
| TraesCS6D01G287000.1 | Wheat | plastid | 10.04 | 24.43 |
| TraesCS7D01G064300.1 | Wheat | plastid | 8.8 | 23.51 |
| TraesCS7D01G117800.1 | Wheat | plastid | 8.87 | 21.83 |
| TraesCS1D01G138100.2 | Wheat | plastid | 10.11 | 21.7 |
| TraesCS7D01G190100.1 | Wheat | plastid | 10.23 | 20.65 |
Protein Annotations
| KEGG:00500+2.4.1.21 | MapMan:3.2.2.4.3 | Gene3D:3.40.50.2000 | InterPro:CBM25 | ncoils:Coil | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0004373 | GO:GO:0005488 | GO:GO:0016740 | GO:GO:0030246 | GO:GO:2001070 |
| InterPro:GS/SS | InterPro:Glyco_trans_1 | HAMAP:MF_00484 | PFAM:PF00534 | PFAM:PF08323 | PFAM:PF16760 |
| PANTHER:PTHR12526 | PANTHER:PTHR12526:SF345 | SMART:SM01066 | SUPFAM:SSF53756 | InterPro:Starch_synth_cat_dom | EnsemblPlantsGene:TraesCS1D01G100100 |
| EnsemblPlants:TraesCS1D01G100100.1 | TIGR:cd03791 | SEG:seg | : | : | : |
Description
No Description!
Coordinates
chr1D:+:87756657..87766679
Molecular Weight (calculated)
181328.0 Da
IEP (calculated)
4.644
GRAVY (calculated)
-0.472
Length
1613 amino acids
Sequence
(BLAST)
(BLAST)
0001: MCAHTEKQLE QKNQTKIKDR SCSRTKWLKD EGAFLPFLMN GRFTRSRTLR CMVASSDPPN RKSRKMVSPQ VKVISSRGYT TRLIVEPSTE NIEHNNRDEE
0101: TLDTYNALLS TETAEWTDTR EAETAKADSS QNALSSSIIG GVDVADEDIL AADLTVNSLS SITKKEVDAV DKARVKEDVF ELDLPATTLR SVIVDVMDHN
0201: GTVQETLRSV IVDVMDDAAD KARVEEDVFE LDLSGNISSS ATTVELDAVD EVGPVQDTFE ANSSGNVSNS ATVREVDTSA EAGNDQGIFR ADLSGNVFSS
0301: STTVEVGAVD EAGSIKDRFE TDSSGNVSTS ATMWDAIDET VADQDAVEAD LSGNASSCAT YREVDDVVDE TRSEEETFAM DLFASESGHE KHMAVDHVGE
0401: ATDEEETYQQ QYPVPSSFSM WDKAIAKTGV SLNPELRLVR VEEQGKVNFS DKKDLSIDDL PGQNQSIIGS YKQDKSIADV AGPTQSIFGS SKQHRSIVAF
0501: PKQNQSIVSV TEQKQSIVGF RSQDLSAVSL PKQNVPIVGT SREGQTKQVP VVDRQDALYV NGLEAKEGDH TSEKTDEDVL HVKFNVDNVL RKHQADRTQA
0601: VETITWKKVD EEHLYMTEHQ IGAAEGQMVV NEDELSITEI GMGRGDKIQH VLSEEELSWS EDEVQLIEDD GQYEVDETSV SVNVEQDIQG SPQDVVDPQA
0701: LKVMLQELAE KNYSMRNKLF VFPEVVKADS VIDLYFNRDL TALANEPDVV IKGAFNGWKW RLFTERLHKS DLGGVWWSCK LYIPKEAYRL DFVFFNGRTV
0801: YENNGNNDFC IGIEGTMNED LFEDFLVKEK QRELEKLAME EAERRTQTEE QRRSKEARAA DEAVRAQAKA EIEIKNKKLQ SMLSLARTCV DNLWYIEAST
0901: DTSGDTIRLY YNRNSRPLAH STEIWMHGGY NNWSDGLSIV ESFVKCNDRD GDWWYADVIP PEKALVLDWV FADGPAGNAR NYDNNARQDF HAILPNNNVT
1001: EEGFWVQEEQ NIYTRLLQER REKEETMKRK AERSANIKAE MKAKTMRRFL LSQKHIVYTE PLEIRAGTTV DVLYNPSNTV LNGKPEVWFR CSFNLWMHPS
1101: GALPPQKMVK SGDGPLLKAT VNVPPDAYMM DFVFSEWEED GIYDNRNGMD YHIPVSDSIE TENYMRIIHI AVEMAPVAKV GGLGDVVTSL SRAVQDLGHT
1201: VEVILPKYDC LNQSSVKDLH LYQSFSWGGT EIKVWVGRVE DLTVYFLEPQ NGMFGVGCVY GRNDDRRFGF FCHSALEFIL QNEFSPHIIH CHDWSSAPVA
1301: WLYKEHYSQS RMASTRVVFT IHNLEFGAHY IGKAMTYCDK ATTVSPTYSR DVAGHGAIAP HREKFYGILN GIDPDIWDPY TDNFIPVPYT CENVVEGKRA
1401: AKRALQQKFG LQQTDVPIVG IITRLTAQKG IHLIKHAIHR TLESNGQVVL LGSAPDHRIQ GDFCRLADAL HGVYHGRVKL VLTYDEPLSH LIYAGSDFII
1501: VPSIFEPCGL TQLVAMRYGS IPIVRKTGGL YDTVFDVDND KDRARSLGLE PNGFSFDGAD SNGVDYALNR AIGAWFDARD WFHSLCKRVM EQDWSWNRPA
1601: LDYIELYHAA RKF
0101: TLDTYNALLS TETAEWTDTR EAETAKADSS QNALSSSIIG GVDVADEDIL AADLTVNSLS SITKKEVDAV DKARVKEDVF ELDLPATTLR SVIVDVMDHN
0201: GTVQETLRSV IVDVMDDAAD KARVEEDVFE LDLSGNISSS ATTVELDAVD EVGPVQDTFE ANSSGNVSNS ATVREVDTSA EAGNDQGIFR ADLSGNVFSS
0301: STTVEVGAVD EAGSIKDRFE TDSSGNVSTS ATMWDAIDET VADQDAVEAD LSGNASSCAT YREVDDVVDE TRSEEETFAM DLFASESGHE KHMAVDHVGE
0401: ATDEEETYQQ QYPVPSSFSM WDKAIAKTGV SLNPELRLVR VEEQGKVNFS DKKDLSIDDL PGQNQSIIGS YKQDKSIADV AGPTQSIFGS SKQHRSIVAF
0501: PKQNQSIVSV TEQKQSIVGF RSQDLSAVSL PKQNVPIVGT SREGQTKQVP VVDRQDALYV NGLEAKEGDH TSEKTDEDVL HVKFNVDNVL RKHQADRTQA
0601: VETITWKKVD EEHLYMTEHQ IGAAEGQMVV NEDELSITEI GMGRGDKIQH VLSEEELSWS EDEVQLIEDD GQYEVDETSV SVNVEQDIQG SPQDVVDPQA
0701: LKVMLQELAE KNYSMRNKLF VFPEVVKADS VIDLYFNRDL TALANEPDVV IKGAFNGWKW RLFTERLHKS DLGGVWWSCK LYIPKEAYRL DFVFFNGRTV
0801: YENNGNNDFC IGIEGTMNED LFEDFLVKEK QRELEKLAME EAERRTQTEE QRRSKEARAA DEAVRAQAKA EIEIKNKKLQ SMLSLARTCV DNLWYIEAST
0901: DTSGDTIRLY YNRNSRPLAH STEIWMHGGY NNWSDGLSIV ESFVKCNDRD GDWWYADVIP PEKALVLDWV FADGPAGNAR NYDNNARQDF HAILPNNNVT
1001: EEGFWVQEEQ NIYTRLLQER REKEETMKRK AERSANIKAE MKAKTMRRFL LSQKHIVYTE PLEIRAGTTV DVLYNPSNTV LNGKPEVWFR CSFNLWMHPS
1101: GALPPQKMVK SGDGPLLKAT VNVPPDAYMM DFVFSEWEED GIYDNRNGMD YHIPVSDSIE TENYMRIIHI AVEMAPVAKV GGLGDVVTSL SRAVQDLGHT
1201: VEVILPKYDC LNQSSVKDLH LYQSFSWGGT EIKVWVGRVE DLTVYFLEPQ NGMFGVGCVY GRNDDRRFGF FCHSALEFIL QNEFSPHIIH CHDWSSAPVA
1301: WLYKEHYSQS RMASTRVVFT IHNLEFGAHY IGKAMTYCDK ATTVSPTYSR DVAGHGAIAP HREKFYGILN GIDPDIWDPY TDNFIPVPYT CENVVEGKRA
1401: AKRALQQKFG LQQTDVPIVG IITRLTAQKG IHLIKHAIHR TLESNGQVVL LGSAPDHRIQ GDFCRLADAL HGVYHGRVKL VLTYDEPLSH LIYAGSDFII
1501: VPSIFEPCGL TQLVAMRYGS IPIVRKTGGL YDTVFDVDND KDRARSLGLE PNGFSFDGAD SNGVDYALNR AIGAWFDARD WFHSLCKRVM EQDWSWNRPA
1601: LDYIELYHAA RKF
0001: MEVCWQIQRP ASLRPGFQEK GRVKINTFSV GFFPRSISSI ASLESQYKSN GFLHQITASA DFSRKKQGRM AASGPKSSGP RGFGRRTTVG SAQKRTQKKN
0101: GEKDSNATST ATNEVSGISK LPAAKVDVQK QSSVVLNERN VLDRSDIEDG SDRLDKKTTD DDDLLEQKLK LERENLRRKE IETLAAENLA RGDRMFVYPV
0201: IVKPDEDIEV FLNRNLSTLN NEPDVLIMGA FNEWRWKSFT RRLEKTWIHE DWLSCLLHIP KEAYKMDFVF FNGQSVYDNN DSKDFCVEIK GGMDKVDFEN
0301: FLLEEKLREQ EKLAKEEAER ERQKEEKRRI EAQKAAIEAD RAQAKAETQK RRELLQPAIK KAVVSAENVW YIEPSDFKAE DTVKLYYNKR SGPLTNSKEL
0401: WLHGGFNNWV DGLSIVVKLV NAELKDVDPK SGNWWFAEVV VPGGALVIDW VFADGPPKGA FLYDNNGYQD FHALVPQKLP EELYWLEEEN MIFRKLQEDR
0501: RLKEEVMRAK MEKTARLKAE TKERTLKKFL LSQKDVVYTE PLEIQAGNPV TVLYNPANTV LNGKPEVWFR GSFNRWTHRL GPLPPQKMEA TDDESSHVKT
0601: TAKVPLDAYM MDFVFSEKED GGIFDNKNGL DYHLPVVGGI SKEPPLHIVH IAVEMAPIAK VGGLGDVVTS LSRAVQELNH NVDIVFPKYD CIKHNFVKDL
0701: QFNRSYHWGG TEIKVWHGKV EGLSVYFLDP QNGLFQRGCV YGCADDAGRF GFFCHAALEF LLQGGFHPDI LHCHDWSSAP VSWLFKDHYT QYGLIKTRIV
0801: FTIHNLEFGA NAIGKAMTFA DKATTVSPTY AKEVAGNSVI SAHLYKFHGI INGIDPDIWD PYNDNFIPVP YTSENVVEGK RAAKEELQNR LGLKSADFPV
0901: VGIITRLTHQ KGIHLIKHAI WRTLERNGQV VLLGSAPDPR IQNDFVNLAN QLHSSHGDRA RLVLTYDEPL SHLIYAGADF ILVPSIFEPC GLTQLIAMRY
1001: GAVPVVRKTG GLFDTVFDVD HDKERAQAQV LEPNGFSFDG ADAPGVDYAL NRAISAWYDG REWFNSLCKT VMEQDWSWNR PALEYLELYH SARK
0101: GEKDSNATST ATNEVSGISK LPAAKVDVQK QSSVVLNERN VLDRSDIEDG SDRLDKKTTD DDDLLEQKLK LERENLRRKE IETLAAENLA RGDRMFVYPV
0201: IVKPDEDIEV FLNRNLSTLN NEPDVLIMGA FNEWRWKSFT RRLEKTWIHE DWLSCLLHIP KEAYKMDFVF FNGQSVYDNN DSKDFCVEIK GGMDKVDFEN
0301: FLLEEKLREQ EKLAKEEAER ERQKEEKRRI EAQKAAIEAD RAQAKAETQK RRELLQPAIK KAVVSAENVW YIEPSDFKAE DTVKLYYNKR SGPLTNSKEL
0401: WLHGGFNNWV DGLSIVVKLV NAELKDVDPK SGNWWFAEVV VPGGALVIDW VFADGPPKGA FLYDNNGYQD FHALVPQKLP EELYWLEEEN MIFRKLQEDR
0501: RLKEEVMRAK MEKTARLKAE TKERTLKKFL LSQKDVVYTE PLEIQAGNPV TVLYNPANTV LNGKPEVWFR GSFNRWTHRL GPLPPQKMEA TDDESSHVKT
0601: TAKVPLDAYM MDFVFSEKED GGIFDNKNGL DYHLPVVGGI SKEPPLHIVH IAVEMAPIAK VGGLGDVVTS LSRAVQELNH NVDIVFPKYD CIKHNFVKDL
0701: QFNRSYHWGG TEIKVWHGKV EGLSVYFLDP QNGLFQRGCV YGCADDAGRF GFFCHAALEF LLQGGFHPDI LHCHDWSSAP VSWLFKDHYT QYGLIKTRIV
0801: FTIHNLEFGA NAIGKAMTFA DKATTVSPTY AKEVAGNSVI SAHLYKFHGI INGIDPDIWD PYNDNFIPVP YTSENVVEGK RAAKEELQNR LGLKSADFPV
0901: VGIITRLTHQ KGIHLIKHAI WRTLERNGQV VLLGSAPDPR IQNDFVNLAN QLHSSHGDRA RLVLTYDEPL SHLIYAGADF ILVPSIFEPC GLTQLIAMRY
1001: GAVPVVRKTG GLFDTVFDVD HDKERAQAQV LEPNGFSFDG ADAPGVDYAL NRAISAWYDG REWFNSLCKT VMEQDWSWNR PALEYLELYH SARK
Arabidopsis Description
ATSS3SS3 [Source:UniProtKB/TrEMBL;Acc:A0A178W4M9]
SUBAcon: [mitochondrion,plastid]
SUBAcon: [mitochondrion,plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.