Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, vacuole
Predictor Summary:
Predictor Summary:
- cytosol 1
- nucleus 1
- extracellular 4
- endoplasmic reticulum 5
- vacuole 5
- plasma membrane 4
- golgi 4
- plastid 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr11P... | Banana | cytosol, mitochondrion, plastid | 36.93 | 79.4 |
| CDX97980 | Canola | plastid | 99.4 | 45.65 |
| AT1G11720.2 | Thale cress | mitochondrion, plastid | 90.62 | 41.5 |
| Bra016818.1-P | Field mustard | cytosol | 94.61 | 36.1 |
| KRH51091 | Soybean | plastid | 75.85 | 35.12 |
| KRH20852 | Soybean | plastid | 79.04 | 34.46 |
| KRH11434 | Soybean | plastid | 78.64 | 33.79 |
| Solyc02g080570.2.1 | Tomato | nucleus, plastid | 81.24 | 33.09 |
| GSMUA_Achr5P00700_001 | Banana | plastid | 70.26 | 31.43 |
| Zm00001d026337_P013 | Maize | plastid | 72.65 | 30.56 |
| KXG27148 | Sorghum | mitochondrion, plastid | 72.46 | 30.48 |
| Zm00001d002256_P012 | Maize | plastid | 71.86 | 30.3 |
| Os04t0624600-01 | Rice | plastid | 71.86 | 29.61 |
| TraesCS2B01G491700.2 | Wheat | plastid | 71.66 | 28.13 |
| TraesCS2A01G468800.1 | Wheat | plastid | 71.46 | 27.39 |
| HORVU2Hr1G106410.9 | Barley | cytosol | 71.86 | 27.09 |
| VIT_10s0116g01730.t01 | Wine grape | plastid | 80.84 | 26.51 |
| TraesCS2D01G468900.2 | Wheat | endoplasmic reticulum, golgi | 71.26 | 25.45 |
| Os08t0191433-01 | Rice | plastid | 70.66 | 22.79 |
| Zm00001d000002_P002 | Maize | plastid | 71.66 | 21.41 |
| HORVU1Hr1G021590.5 | Barley | mitochondrion | 67.86 | 21.34 |
| KXG24650 | Sorghum | plastid | 71.66 | 21.32 |
| TraesCS1D01G100100.1 | Wheat | cytosol | 68.26 | 21.2 |
| TraesCS1B01G119300.1 | Wheat | plastid | 68.06 | 21.18 |
| TraesCS1A01G091500.1 | Wheat | plastid | 68.26 | 20.99 |
| Bra021017.1-P | Field mustard | plastid | 34.33 | 16.86 |
| GSMUA_Achr11P... | Banana | plastid | 32.34 | 15.93 |
| Bra009747.1-P | Field mustard | plastid | 20.56 | 15.82 |
| Bra039138.1-P | Field mustard | plastid | 23.15 | 15.05 |
| Bra010189.1-P | Field mustard | nucleus | 21.36 | 14.62 |
| Bra021486.1-P | Field mustard | endoplasmic reticulum | 4.39 | 10.43 |
| Bra021487.1-P | Field mustard | cytosol | 6.19 | 8.36 |
| Bra024412.1-P | Field mustard | plastid | 9.58 | 8.09 |
Protein Annotations
| EnsemblPlants:Bra019836.1 | EnsemblPlants:Bra019836.1-P | EnsemblPlantsGene:Bra019836 | Gene3D:3.40.50.2000 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0030246 | GO:GO:2001070 | InterPro:CBM25 | InterPro:Glyco_trans_1 | PANTHER:PTHR12526 | PANTHER:PTHR12526:SF341 |
| PFAM:PF00534 | PFAM:PF16760 | SEG:seg | SignalP:SignalP-noTM | SMART:SM01066 | SUPFAM:SSF53756 |
| UniParc:UPI000253EB8D | UniProt:M4DTJ3 | MapMan:3.2.2.4.3 | : | : | : |
Description
AT1G11720 (E=4e-153) ATSS3 | ATSS3 (starch synthase 3); starch synthase/ transferase, transferring glycosyl groups
Coordinates
chrA06:+:4075553..4084774
Molecular Weight (calculated)
56678.7 Da
IEP (calculated)
6.314
GRAVY (calculated)
-0.333
Length
501 amino acids
Sequence
(BLAST)
(BLAST)
001: MCPRNIIVST VIVPVRALVI DWVFADGPPE GAFLYDNNSR QDFHALVPLT TPEEVYWSEE EDLMFRKLQE ERRLKEEAMR VKMEKTGRLK AETKERTLKK
101: FLLSQKDVVY TEPLEIQAGS SVTVLYNPSN TVLKGKPEVW FRGSFNRWTH RLGPLPPQKM EAADDGSSHL KTSAKVPLDA YMMDFVFSEK EDGGVFDNKD
201: GLDYHLPVVG GIAKEPPLHI VHIAVEMAPI AKVSRTYAKE VAGNSVISPH LYKFHGIVNG IDPDIWDPYN DNFIPVPYTS ENVLEGKRAA KEELQKRLGL
301: KSSDLPLVGI ITRLTHQKGI HLIKHAIWRT LERNGQVVLL GSAPDPRIQN DFVNLANQLH STHGDRARLV LTYDEPLSHL IYAGADFILV PSIFEPCGLT
401: QLIAMRYGSV PIVRKTGGLY DTVFDVDHDK ERAQAQVLEP NGFSFDGADA PGVDYALNRA ISAWYDGREW FNSLCKTVME QDWSWNRPAL EYIELYHSAR
501: K
101: FLLSQKDVVY TEPLEIQAGS SVTVLYNPSN TVLKGKPEVW FRGSFNRWTH RLGPLPPQKM EAADDGSSHL KTSAKVPLDA YMMDFVFSEK EDGGVFDNKD
201: GLDYHLPVVG GIAKEPPLHI VHIAVEMAPI AKVSRTYAKE VAGNSVISPH LYKFHGIVNG IDPDIWDPYN DNFIPVPYTS ENVLEGKRAA KEELQKRLGL
301: KSSDLPLVGI ITRLTHQKGI HLIKHAIWRT LERNGQVVLL GSAPDPRIQN DFVNLANQLH STHGDRARLV LTYDEPLSHL IYAGADFILV PSIFEPCGLT
401: QLIAMRYGSV PIVRKTGGLY DTVFDVDHDK ERAQAQVLEP NGFSFDGADA PGVDYALNRA ISAWYDGREW FNSLCKTVME QDWSWNRPAL EYIELYHSAR
501: K
0001: MEVCWQIQRP ASLRPGFQEK GRVKINTFSV GFFPRSISSI ASLESQYKSN GFLHQITASA DFSRKKQGRM AASGPKSSGP RGFGRRTTVG SAQKRTQKKN
0101: GEKDSNATST ATNEVSGISK LPAAKVDVQK QSSVVLNERN VLDRSDIEDG SDRLDKKTTD DDDLLEQKLK LERENLRRKE IETLAAENLA RGDRMFVYPV
0201: IVKPDEDIEV FLNRNLSTLN NEPDVLIMGA FNEWRWKSFT RRLEKTWIHE DWLSCLLHIP KEAYKMDFVF FNGQSVYDNN DSKDFCVEIK GGMDKVDFEN
0301: FLLEEKLREQ EKLAKEEAER ERQKEEKRRI EAQKAAIEAD RAQAKAETQK RRELLQPAIK KAVVSAENVW YIEPSDFKAE DTVKLYYNKR SGPLTNSKEL
0401: WLHGGFNNWV DGLSIVVKLV NAELKDVDPK SGNWWFAEVV VPGGALVIDW VFADGPPKGA FLYDNNGYQD FHALVPQKLP EELYWLEEEN MIFRKLQEDR
0501: RLKEEVMRAK MEKTARLKAE TKERTLKKFL LSQKDVVYTE PLEIQAGNPV TVLYNPANTV LNGKPEVWFR GSFNRWTHRL GPLPPQKMEA TDDESSHVKT
0601: TAKVPLDAYM MDFVFSEKED GGIFDNKNGL DYHLPVVGGI SKEPPLHIVH IAVEMAPIAK VGGLGDVVTS LSRAVQELNH NVDIVFPKYD CIKHNFVKDL
0701: QFNRSYHWGG TEIKVWHGKV EGLSVYFLDP QNGLFQRGCV YGCADDAGRF GFFCHAALEF LLQGGFHPDI LHCHDWSSAP VSWLFKDHYT QYGLIKTRIV
0801: FTIHNLEFGA NAIGKAMTFA DKATTVSPTY AKEVAGNSVI SAHLYKFHGI INGIDPDIWD PYNDNFIPVP YTSENVVEGK RAAKEELQNR LGLKSADFPV
0901: VGIITRLTHQ KGIHLIKHAI WRTLERNGQV VLLGSAPDPR IQNDFVNLAN QLHSSHGDRA RLVLTYDEPL SHLIYAGADF ILVPSIFEPC GLTQLIAMRY
1001: GAVPVVRKTG GLFDTVFDVD HDKERAQAQV LEPNGFSFDG ADAPGVDYAL NRAISAWYDG REWFNSLCKT VMEQDWSWNR PALEYLELYH SARK
0101: GEKDSNATST ATNEVSGISK LPAAKVDVQK QSSVVLNERN VLDRSDIEDG SDRLDKKTTD DDDLLEQKLK LERENLRRKE IETLAAENLA RGDRMFVYPV
0201: IVKPDEDIEV FLNRNLSTLN NEPDVLIMGA FNEWRWKSFT RRLEKTWIHE DWLSCLLHIP KEAYKMDFVF FNGQSVYDNN DSKDFCVEIK GGMDKVDFEN
0301: FLLEEKLREQ EKLAKEEAER ERQKEEKRRI EAQKAAIEAD RAQAKAETQK RRELLQPAIK KAVVSAENVW YIEPSDFKAE DTVKLYYNKR SGPLTNSKEL
0401: WLHGGFNNWV DGLSIVVKLV NAELKDVDPK SGNWWFAEVV VPGGALVIDW VFADGPPKGA FLYDNNGYQD FHALVPQKLP EELYWLEEEN MIFRKLQEDR
0501: RLKEEVMRAK MEKTARLKAE TKERTLKKFL LSQKDVVYTE PLEIQAGNPV TVLYNPANTV LNGKPEVWFR GSFNRWTHRL GPLPPQKMEA TDDESSHVKT
0601: TAKVPLDAYM MDFVFSEKED GGIFDNKNGL DYHLPVVGGI SKEPPLHIVH IAVEMAPIAK VGGLGDVVTS LSRAVQELNH NVDIVFPKYD CIKHNFVKDL
0701: QFNRSYHWGG TEIKVWHGKV EGLSVYFLDP QNGLFQRGCV YGCADDAGRF GFFCHAALEF LLQGGFHPDI LHCHDWSSAP VSWLFKDHYT QYGLIKTRIV
0801: FTIHNLEFGA NAIGKAMTFA DKATTVSPTY AKEVAGNSVI SAHLYKFHGI INGIDPDIWD PYNDNFIPVP YTSENVVEGK RAAKEELQNR LGLKSADFPV
0901: VGIITRLTHQ KGIHLIKHAI WRTLERNGQV VLLGSAPDPR IQNDFVNLAN QLHSSHGDRA RLVLTYDEPL SHLIYAGADF ILVPSIFEPC GLTQLIAMRY
1001: GAVPVVRKTG GLFDTVFDVD HDKERAQAQV LEPNGFSFDG ADAPGVDYAL NRAISAWYDG REWFNSLCKT VMEQDWSWNR PALEYLELYH SARK
Arabidopsis Description
ATSS3SS3 [Source:UniProtKB/TrEMBL;Acc:A0A178W4M9]
SUBAcon: [mitochondrion,plastid]
SUBAcon: [mitochondrion,plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.